| Entry |
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| Name |
(RefSeq) dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1 isoform X1
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| KO |
| K04857 | voltage-dependent calcium channel L type alpha-1S |
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| Organism |
cclu Coregonus clupeaformis (lake whitefish)
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| Pathway |
| cclu04261 | Adrenergic signaling in cardiomyocytes |
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| Brite |
KEGG Orthology (KO) [BR:cclu00001]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121545876
04020 Calcium signaling pathway
121545876
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
121545876
09153 Circulatory system
04260 Cardiac muscle contraction
121545876
04261 Adrenergic signaling in cardiomyocytes
121545876
04270 Vascular smooth muscle contraction
121545876
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:cclu04040]
121545876
Ion channels [BR:cclu04040]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121545876
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
30:complement(13253809..13298993)
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| AA seq |
1896 aa
MAANGEPAMAALTSFIMNEEELKRKQREKLKKMQATGGNPRPARSLFFFTLQNPFRKACI
NIVEWKPFEIIVLLTIFANCVALAVYLPMPEDDNNATNTSLESLEYIFLVIFTLECFLKI
IAYGFIFHEGAYLRNAWNLLDFVIVFMGLFTIALDTINYLAGIQMEKGGGFDMKALRAFR
VLRPLRLVTGVPSLQVVMNSILKAMLPLLHIGLLVFFMVTIYAIVGLELFKCKMHKTCYW
TGTDIMATLENERPAPCAQAGNGRRCLLNGTECRSGWAGPNFGITHFDNFGFAMLTVFQS
ITMEGWTDVLYWVNDAIGNEWPWLYFVTLILIGSFFVLNLVLGVLSGEFTKEREKAKSRG
EFQKLRETQQLDEDLKGYMEWITQAEVLDNDQEGKGLLPLTEADTDSLIGLESESRVVYY
YRLARRWNRFFRMKCLVYVKSKKFYWSVILVVFLNTVAIASEHHHQSDMLTTLQDNANKV
LLTLFALEMFVKMYALGLLQYFLSLFNRFDCFVVSVGILEIILVTADVMSPLGISVLRCI
RLLRLLKVTKYWTSLSNLVASLLNSVRSIASLLLLLFLFIVIFSLLGMQVFGGKFNFPDQ
EIRRSNFDNFPHALISVFQVLTGEDWNSIMYNGIMAYGGPVFPGILVSIYFIILFTCGNY
ILLNVFLAIAVDNLAEAESLTAAQKDKAEERKRRKLLRANMPDKADEEKVLLAKKLAEQR
AKIEGIPTTAKLKVDEFESSVNEVKDPFPPADFPGDDEEEEPAIPESPRPRPMADLQLKE
EEVPMPETYSFFIFGPENKFRKLCHRIVNATPFTNFILLFILLSSISLAAEDPIDPKSFR
NKVLAYADIVFTTVFTIEIVLKMTVYGAFLHPGSFCRNSFNMLDLLVVAVSLLSMGMESS
AISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVLVTMLLDFMFSCIGVQ
LFKGKFYTCSDPSKMTEVTCQGMFLKHQENSLQEMVLAPREWINSDFNFDNVLNGMLALF
TVSTFEGWPQLLYKAIDSDREDMGPVYNNRVDISIFFIVYLILIAFFMMNIFVGFVIVTF
QEQGESEYKNCELDKNQRQCVQYALKAKPLRCYIPKNHYQYNVWYIVTSCYFEYAMFFLI
MLNTLCLGMQHCNQSDHVTKLSDTLNMIFTVLFTVEMILKLMAFKAKGYFGDPWNVFDFL
IVIGSVVDVILSEVDKHKLLAPQQQAVGSSTSSQQDLETNPMQAIAHSENARVSITFFRL
FRVMRLVKLLNRSEGIRNLLWTFIKSFQALPYVALLIIMLFFIYAVIGMQVFGKIALVDG
TQINRNNNFQTFPQAVLLLFRCATGEAWQEVMVASMYGKKCDPKSDFLPGEEYTCGASFA
VFYFMSFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKKIWAEYDPNATGRI
KHLDVVTLLRRIQPPLGFGKFCPHRSACKRLISMNMPLNSDGTVTFNATLFALVRTALKI
KTEGVEGNFEQANEELRAIIKKIWKRTSMKLLDQVIPPIGDDEVTVGKFYATFLIQDHFR
KFMKRQEEYYGYRPTKKSANGSAPEMQAGLRSIEEEAAPELHRAISGDLLNEEEMERAME
DSLEEGIYRRQGGLFGDHSDPFSTEISSVLPSHMASQRPLHLSESRPEEAESPISRSDSV
FLPNTEFFPMTPTKHNSNNNAFSYEREESPKVTRHHSRVNTERSSPDNRHLPEISEKPIR
TDITQFPYDPNYGESQSLPNCSQAKGEATEEAVGATGGSVSAPAADQLIKEVLVVGGLGD
LANDDSFVVVTRNEMAEALRMPMSHFEDVALGLLNGRSGRATSATRKKSPIPVPPSIPAR
PSRATALNPKPQEQRKKHPIPPFKQHQMGEEADTKV |
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| NT seq |
5691 nt +upstreamnt +downstreamnt
atggcggccaacggtgagccggcgatggctgcgttgacatcgttcatcatgaacgaagag
gagctaaagaggaagcagagggagaagttgaagaagatgcaggcgacggggggtaaccct
cgccccgcccgatccctcttcttcttcaccctccaaaaccccttcagaaaagcctgcatt
aacatcgtagagtggaaaccgtttgagatcatcgtcctgctgaccatctttgccaactgt
gtggccttggctgtgtatctacccatgcctgaagacgacaacaacgctaccaacaccagc
ctggagagtctggagtatatcttcctggtgatctttacgttagagtgctttctgaagata
atagcgtacggctttatattccacgagggagcctatctacggaacgcttggaacttactg
gactttgtcatcgtcttcatgggcctcttcaccatcgccctggacaccataaactatcta
gcaggcattcaaatggagaaaggaggagggttcgatatgaaggccctccgagcgttcagg
gtgctcaggcccctacgtctcgtaacaggagtccccagcctgcaggtggtgatgaactct
atcctgaaggccatgcttcccctgctgcacatcggcctgctggtcttcttcatggtcact
atctacgccatcgtaggtctggagctcttcaagtgtaagatgcacaagacctgctactgg
accggcacagacatcatggctacattagagaacgagaggcccgccccctgtgcccaggcc
ggtaacgggcgccgctgcctcctcaacgggacagagtgtcgttcaggctgggcggggcca
aacttcggcatcacccactttgacaactttggtttcgccatgctcaccgtcttccagtct
atcactatggagggctggaccgatgtgctctactgggtgaacgatgccatagggaacgag
tggccctggctctacttcgtgactctgatcctaattggatccttcttcgtactcaatctg
gtcctgggtgttctcagtggagagttcacaaaggagagagagaaggctaagtcccgaggg
gagttccagaagttgagggagacccagcagctggatgaggacctgaagggctacatggag
tggatcactcaggctgaggtcctagacaacgaccaggaggggaaaggactcctgcctttg
acggaggcagacacagacagtctgatagggctggagagcgagagccgggtggtgtactac
tatcgtctggctcgtcgctggaaccggttcttcaggatgaagtgtctcgtctatgtaaaa
tctaagaaattctattggtcggtgattctggtggtcttcctaaacactgttgccatcgct
agtgaacatcaccaccagtcagacatgcttactactctacaagataatgccaacaaggtg
ctgctgaccctgtttgcgttggagatgtttgtgaagatgtacgctctgggcctgcttcaa
tacttcttgtcgctgttcaaccgattcgactgcttcgtggtgagtgttggcatcctcgag
atcatcctggtcactgctgacgttatgtcccctctcggcatctctgtcctccgctgcatc
cgcctgctgagactgctcaaggtcaccaagtattggacctccctcagtaacctggttgcc
tccctgctaaactcagtccgttccatcgcctctctgctcctcctcctcttcctcttcatc
gtcatcttctccctgctgggcatgcaggtgttcggggggaagtttaacttcccagaccag
gagatcagacgcagtaactttgacaacttcccccatgctctcatcagtgtcttccaggtt
ctgacaggagaggactggaactccatcatgtataatggtatcatggcttacggtggacca
gtcttccctggcatcctagtcagcatctacttcatcatcctcttcacctgtggaaactac
atcctcctcaacgtgttcctggccatcgctgttgacaacctggcagaggcagagagcctg
acggccgcgcagaaagacaaagcagaggagaggaagaggaggaaactgctcagggccaac
atgccagacaaggctgatgaggagaaggttctgctggctaagaaactggctgaacagagg
gctaagatagaggggattcccaccactgctaagctgaaagtagatgagtttgaatccagc
gtgaatgaagtgaaggatcccttccctcctgcagacttcccaggtgatgacgaggaggag
gagcctgctatccctgagagcccacggcctcgaccaatggctgacctccagctgaaagag
gaagaggttcctatgcctgagacctactccttctttatcttcggaccggagaacaagttt
cgtaagctgtgtcataggatcgtcaatgccacccccttcaccaacttcatcctgctcttc
atcctcctcagtagtatatcactggccgctgaggaccccatagaccccaagtcattcagg
aataaggttttggcttatgctgatatcgtcttcaccactgtgttcaccattgagattgtg
ctgaagatgacggtgtacggagccttcctacatccaggctctttctgccgtaactccttc
aacatgctggacctgctggtggtggccgtgtctctgttgtccatgggaatggagtccagt
gccatctcagtggtgaagattctcagggtgttgagggtgctgaggcctctaagggcaatc
aaccgagccaagggcctgaagcatgtggtccagtgtgtgtttgtagccatcaaaaccatc
ggcaacatcgtcctggtcaccatgctgctagacttcatgttctcctgcataggggtccag
ctcttcaagggtaaattctacacttgctcagacccctccaaaatgacggaggtcacgtgc
cagggtatgttcctgaagcaccaggagaatagtcttcaggagatggtgttggcccccagg
gagtggatcaacagtgactttaactttgacaacgtcctcaacggcatgctggctctgttc
accgtgtccacgttcgaagggtggccacagctgttgtataaggccatagactcagacagg
gaggatatgggcccagtctacaacaaccgtgtggatatctccatcttcttcatcgtctac
ctcatcctcatcgccttcttcatgatgaacatcttcgtcggcttcgtcatcgtcaccttc
caggagcagggagagtctgagtataagaactgtgagctcgacaagaaccagcgtcagtgt
gtgcagtatgctctgaaggccaagcctctgcggtgctacatccctaagaaccactatcag
tacaatgtgtggtacatagtcacctcctgctactttgagtatgccatgttcttcctcatc
atgctcaatacactgtgtctcggcatgcagcactgtaaccagtcagaccatgtgaccaag
ctgtctgacactttgaacatgatcttcactgtcctcttcaccgtggagatgatcctcaaa
ctcatggccttcaaagctaagggctactttggagacccatggaacgtgtttgacttcctc
atcgtcatcggcagtgttgtcgatgtcatcctgagtgaggtggataaacacaaactcctg
gctccacagcagcaggctgtgggaagcagcactagttcacagcaggacctggagacaaac
cctatgcaggccattgcacattctgagaatgccagagtgtccatcacgttcttccgtctg
ttccgtgtgatgcgtctggtcaaactactaaacaggtcagagggcatccgcaacctactg
tggaccttcatcaagtccttccaggctctgccttacgtggctctcctgatcatcatgctc
ttcttcatctacgcagtcatcgggatgcaggtgtttgggaagatagccttagtggacggc
acacagatcaaccgcaacaacaacttccagacattcccccaagctgtcctgctgcttttc
cgttgtgcaacaggagaggcgtggcaggaagtgatggtggccagtatgtatggcaagaag
tgtgaccccaagtctgacttcctacctggggaggagtacacctgtggggccagcttcgct
gtcttctactttatgtccttctatatgctgtgtgccttcctgattatcaacttatttgtg
gctgtgatcatggacaactttgactacctgacacgtgattggtccatcctgggtcctcat
catctggatgagttcaagaagatctgggccgagtatgacccgaatgccacggggcgtata
aaacatctggacgtggtaacactattacgacggatccagcctccgctaggctttgggaaa
ttctgtccgcatcgctcagcctgcaagcgtttaatatccatgaacatgcccctgaacagc
gatggcacagtcaccttcaatgccactctgtttgccctggtcaggactgccctcaagatc
aagactgaaggtgtcgaaggtaactttgagcaggctaatgaagagttaagagccattata
aagaaaatctggaaacgcaccagtatgaaactgctggaccaggtcatcccaccaattgga
gatgacgaggtgacggtgggaaaattctacgccaccttcctgatccaggatcatttccgt
aagtttatgaagcgtcaagaggagtactatggctaccggcccaccaagaagagtgctaat
gggagtgctccagagatgcaggctggtctgaggagtatagaggaggaggcagctccagag
ctccacagggccatctcaggagaccttctgaatgaggaggagatggaaagagccatggag
gactctctggaggaaggcatctacaggcgccagggtggtctgttcggggaccattcagac
ccgttctccacagaaatcagcagtgtcctgccctcccacatggctagccaacgtccccta
catttatcagagagccgccccgaggaggctgagtcgcccatcagtcgctcagactcagtc
ttcctccccaatacagagttctttcccatgacccccaccaaacacaacagcaacaacaac
gcgttttcttatgagagagaggagagtccaaaagtgaccagacaccattccagagtgaac
acagagcgcagctctccagataacagacacttacctgagatcagtgagaaaccaatcaga
acagacatcactcagttcccctatgaccccaactacggtgagagccagtctctccccaac
tgttcccaagctaaaggggaagctacagaggaagctgtaggagccacaggaggctctgtt
tctgcacctgccgctgaccagctgatcaaagaggtcttagtggttggtggtcttggcgac
ctggccaatgacgattcatttgtggtggtgactcgtaatgaaatggctgaggcgttgcgc
atgcccatgtcccactttgaagacgtggccctgggcctcctcaacgggcgcagcggccgt
gccacctctgccacaagaaagaagagccccatccctgtacccccctccatccccgcccgg
ccctctagggctacagcactgaatccgaaaccccaggagcagagaaagaagcacccaatc
cccccctttaaacaacaccagatgggggaagaggcagacaccaaagtgtag |
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