Coregonus clupeaformis (lake whitefish): 121545895
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Entry
121545895 CDS
T08357
Symbol
tgfb5
Name
(RefSeq) transforming growth factor beta-2 proprotein
KO
K13376
transforming growth factor beta-2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04060
Cytokine-cytokine receptor interaction
cclu04068
FoxO signaling pathway
cclu04110
Cell cycle
cclu04218
Cellular senescence
cclu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121545895 (tgfb5)
04350 TGF-beta signaling pathway
121545895 (tgfb5)
04068 FoxO signaling pathway
121545895 (tgfb5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121545895 (tgfb5)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121545895 (tgfb5)
04218 Cellular senescence
121545895 (tgfb5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121545895 (tgfb5)
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121545895 (tgfb5)
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Transforming growth factors (RSTK binding)
121545895 (tgfb5)
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Growth factors/receptors
121545895 (tgfb5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
Mito_fiss_reg
Motif
Other DBs
NCBI-GeneID:
121545895
NCBI-ProteinID:
XP_041712731
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Position
3:complement(6940948..6946521)
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AA seq
433 aa
AA seq
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MEPSEPVHQSDHRTMWLTHLALLLLRLAVSAEGLSTCQSFSLDDQKSKRIEAVRGQILSK
LRYRSPPEPPAPSPQPEAVPAEVMLLYNSTRELLKERARQAESACDRESSEEDYYAKEVQ
RIDMLPQRTDINAVNPPVPSPYYRVVGFDVSGVDRNSSTLVKAEFRIYRAPNPQARTSEQ
RVEIYQVIKPEKSTGPSQRYIDSRTVRPRTKGAWLSVDVTDTVRDWLAHRERNLGLKLGV
HCPCCTFVPSTNSIVFNKSEELEARFAGLDDELLQQQVRKPGSGLAKGQVEFSTKTPHLI
LTLLPSDRVDNPGKKIRKRRAAADTTTCSRNSDAGCCLRSLYIDFRRDLNWKWIHEPKGY
KANFCSGSCPYLWSADNHYNMILPLYNKLNPEASASPCCVPQDLEPLTIVYFMGRTPKVE
QLSNMVVKSCKCR
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggagccgagtgagcccgttcaccaatctgaccaccggactatgtggctcacccacctc
gccctgctgctgctccggctggcggtgtccgcggaggggctctccacctgtcagtcattt
agcctggatgatcagaagtccaagcgcatcgaggccgttcgcggtcagatcctcagcaag
ctccgctaccggagcccaccggagcccccagcaccgagcccacagccagaggctgtgccc
gccgaggtgatgctgctttacaacagcactcgggagctgctgaaggagcgtgcgcgccag
gccgagtccgcgtgcgaccgggagagcagcgaggaggattattatgcaaaagaggttcag
cgcattgacatgcttccgcagcgcacagacatcaatgcagtgaaccctccagtccccagc
ccatattacagagtggtggggttcgatgtgagtggtgtggacaggaactccagcaccctg
gttaaagctgagttcagaatctacagagcacccaacccccaggcccgcacctcagagcag
agagtagagatctatcaggtgataaagccagaaaagtcaacaggcccctcgcagagatac
atcgattccagaactgttcgcccacggaccaagggggcgtggctctctgtggatgtcact
gacactgtgagggattggctggctcatagggagaggaacctgggtttgaaactgggtgtt
cactgtccctgctgcacctttgttccctccaccaacagcatcgtgttcaataagagcgag
gagttggaggcgcgcttcgcaggtctggatgatgagctgcttcagcagcaggtgcggaag
ccggggtcagggctggctaagggccaggtagagtttagtaccaagaccccccatctcatc
ctcaccctgctgccaagcgacagggtagacaacccgggcaagaagatccgcaagaggagg
gccgccgcagacaccaccacctgctccaggaactcagacgcgggctgctgtctgcgatcg
ctctacatcgacttccgccgggacctgaactggaagtggatccacgagccgaagggctac
aaggccaatttctgctctggcagctgcccatacctctggagcgctgacaaccactacaac
atgatcctgccgctgtataacaagctgaaccctgaggcgtctgcctctccatgctgcgta
cctcaggacctggagcctctgaccattgtttacttcatgggccgaacgcccaaggtagag
cagctctcaaacatggtggtcaagtcctgcaagtgccgctga
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