Coregonus clupeaformis (lake whitefish): 121545907
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Entry
121545907 CDS
T08357
Name
(RefSeq) peroxisome proliferator-activated receptor delta-like
KO
K04504
peroxisome proliferator-activated receptor delta
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03320
PPAR signaling pathway
cclu04148
Efferocytosis
cclu04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121545907
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121545907
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
121545907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121545907
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cclu03310
]
121545907
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121545907
Nuclear receptors [BR:
cclu03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
121545907
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121545907
NCBI-ProteinID:
XP_041712755
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Position
30:complement(11552398..11561923)
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AA seq
524 aa
AA seq
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MDGLLQLPSPEHLEQVNGETRTGPLPLCSPNSPQPLDTVADDIWTGREVEAVASDFGGLT
DLQELGVEEGEGSGAERPRSPISRVSWNGTGSQQNGENGEGGEEERLEKDKTSYSRQDSP
AAANNYTDLSHTSSPSLSEQLRLGRDEATGPGINVECRICADKASGFHYGVHACEGCKGF
FRRTIRMKLEYERCERACKILKKNRNKCQYCRFQKCLALGMSHDAIRYGRMPGAEKKKLV
AGLLAEQLDPHHPGGSDLKTLAKQVYQAYLKNLIMTKKKARSILTGKTSCTTPFVIHDVD
TLWQAESGLVWNQLVPGAPLTKEIGVHVFYRCQCTTVETVRELTEFAKNIPGFVDLFLND
QVTLLKYGVHEAIFAMLPSLMNKDGLLVANGKGFVTREFLRSLRKPFSEIMEPKFEFAVK
FNALELDDSDLALFVAIIILCGDRPGLMNVKQVEQSQDGILQALDQHLQANHQDSLYLFP
KLLNKMADLRQLVTENALLVQKIKKTESETSLHPLLQEIYKDMY
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggatgggttactgcagctaccttcccctgagcaccttgaacaggtgaatggggagact
aggacaggccccctgcccctatgtagcccaaactctccacagcccctggacacagtagct
gatgatatatggactggaagggaggtggaggcagtggcctctgactttggagggttgaca
gacctgcaggagctgggggttgaggagggtgagggcagtggggcggagaggccgaggtcc
cccatctcgagggtatcatggaatgggactggcagccaacagaatggagagaatggagaa
ggaggggaagaggagagactagagaaggacaagaccagctacagcagacaagacagtcct
gctgctgctaacaactacacagacctgtctcacacgtcgtctccctcgctgtcggagcag
ctgcgtctgggacgggatgaggccacgggccctggtatcaacgtggagtgtaggatctgt
gctgacaaagcttcagggttccactacggtgtgcatgcctgcgagggctgcaagggcttc
ttccggcggaccattcggatgaagctggagtatgagcgctgtgagagggcctgtaagatc
ctgaagaagaaccgtaataagtgccaatactgccgcttccagaagtgcctggccctgggc
atgtcccatgatgcgatccggtatgggcgtatgccgggggctgagaagaagaagctagtg
gctggcctgctagcggagcaactggacccccaccaccctggtggctcagacctcaagacc
ctggctaaacaggtgtaccaagcctacctgaagaacctcattatgaccaagaagaaagcc
cgcagcatcctcactggcaagaccagctgcacaacgccatttgtgatccatgatgtggac
accctgtggcaagcagagagtggtctagtgtggaaccagttagtccccggcgcgcccctc
acaaaggagataggggtacacgtgttttatcgctgtcagtgcaccacggtggagacggta
cgagagctcactgagttcgccaagaacatcccagggtttgtggatctcttcctcaacgac
caggtgaccctactaaagtatggcgtccacgaggccatcttcgccatgctgccctccctc
atgaacaaagatggcctcctggtggccaacgggaagggctttgtgacccgggagttcctg
aggagcctccgtaaacccttcagtgagatcatggagcccaagtttgagtttgctgtaaag
ttcaatgctctggagctggatgacagtgacctggctctgtttgtggccattatcatcctg
tgtggagatcgcccggggctaatgaacgtgaagcaggtagaacagagtcaggacggtatt
ctccaggccttggaccagcacctgcaggccaaccaccaggactccctctacctcttcccc
aagctgctgaacaagatggctgacctcagacagctggtcacagagaacgccttgctggtg
cagaagatcaagaagacagagtcggagacctctctgcacccgctactacaggagatctat
aaggacatgtactga
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