Coregonus clupeaformis (lake whitefish): 121545908
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Entry
121545908 CDS
T08357
Symbol
mkrn4
Name
(RefSeq) makorin, ring finger protein, 4 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121545908 (mkrn4)
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121545908 (mkrn4)
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121545908 (mkrn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf-CCCH_4
Torus
zf_CCCH_4
zf-RING_2
zf-C3HC4
zf-CCCH_2
zf-RING_UBOX
zf-CCCH_DUS3L
zf-C3HC4_4
zf-rbx1
zf-RING_5
zf-CCCH_PARP12
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
121545908
NCBI-ProteinID:
XP_041712756
LinkDB
All DBs
Position
30:complement(11540270..11544752)
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AA seq
422 aa
AA seq
DB search
MEQYGFPYHDSYERPLIHRRICRQFMNGSCRFGSSCHYLHEWPSVLPPTSQICRYFQKGG
CWFGDGCRYLHITDAEAASAGLSRRGSAPVVHTPWVGHALPERRGSDPSLLQAQGFYSQG
RRGSESMHTYLAHLQHNFGRQNTDITEEDVAEGSSQTSPQRPAESSHANVTDPQASVQQC
PETSAQTTVPSSTLSAQAGEWRPLVNQQQEPSSQEVAAERGASSATAAFQTEQEHTDYFN
QSKDVTCGICMETVYEKTRAEERRFGILPNCSHPFCLSCIVTWRKTKNFQEEVIKGCPQC
RVKSAFYVPNKYWVEGQPKEILIRNFKEKCSKRRCSFFMRHGCCPFKTECLYWHDLPHGY
RPPRRRRSDHSHHAMSLDDLGSLQLLDYVIAMTLLDDLLDDDDDDDDEFPLYLSEYDDYG
LF
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggaacaatatgggtttccgtaccatgactcctatgaacgtcctttaattcatagaagg
atttgcaggcaattcatgaacggttcatgcagattcggttcgagctgtcattatctacac
gagtggccatcagtgttgccgccgacatcccaaatatgcaggtacttccagaaaggtgga
tgctggtttggagatggctgcagatatctccacatcactgatgctgaggcagccagtgcg
gggttgagtaggaggggttcagcacctgtggttcacaccccgtgggttggccatgctcta
ccagaacgtagaggatcagatccctctctactgcaggcacagggcttctacagccaagga
cgcaggggctcagagtccatgcatacctatttagcacacctgcagcacaactttggccgt
cagaacacagatatcacagaagaggatgtagccgaaggttcatcgcagacttcacctcaa
cgaccggcggagtcatcacacgctaatgtcacagatccccaagcatcagtccaacagtgt
cccgagacatcggcccaaactacagttccatccagcacactgtcagctcaagcaggcgaa
tggaggcctctagtcaatcagcagcaggagccttcctcccaggaggtagcagcagagcgt
ggtgcctcctctgcaactgctgccttccagacggaacaggagcatacggactacttcaac
caaagtaaagatgtgacctgtggcatctgcatggagacagtgtacgagaagacccgtgct
gaggagaggcgctttggcatcctgcccaactgcagccatcctttctgcctgagctgcatc
gtcacctggaggaaaaccaaaaacttccaggaagaagttataaagggctgcccacagtgc
agagtgaagtctgcgttttacgtccctaacaagtactgggtggaaggacaaccaaaggaa
atccttatccgtaacttcaaagagaaatgcagtaaaagaagatgtagtttcttcatgcgt
catggatgctgtcccttcaagactgagtgtctctattggcatgacctgcctcatggctac
agaccacctcgccgacgcagatcagatcattctcaccatgcgatgagtctggatgatttg
ggcagcctacaacttcttgactatgtcattgcgatgactctactggatgacttgctggat
gatgatgatgacgacgatgatgagttccctctgtacctgagtgaatatgacgattatggt
ctattctga
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