Coregonus clupeaformis (lake whitefish): 121545917
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Entry
121545917 CDS
T08357
Name
(RefSeq) LHFPL tetraspan subfamily member 3 protein isoform X1
KO
K23893
LHFPL tetraspan subfamily member protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
121545917
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121545917
03037 Cilium and associated proteins [BR:
cclu03037
]
121545917
Transporters [BR:
cclu02000
]
Other transporters
Pores ion channels [TC:
1
]
121545917
Cilium and associated proteins [BR:
cclu03037
]
Other cilia and associated proteins
Stereociliary proteins
121545917
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
L_HMGIC_fpl
Claudin_2
DUF7086
DUF7315
Otopetrin
Atthog
Motif
Other DBs
NCBI-GeneID:
121545917
NCBI-ProteinID:
XP_041712768
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All DBs
Position
30:complement(11077492..11104420)
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AA seq
244 aa
AA seq
DB search
MLPSQEAAKIYHDNYMRNSRAIGVLWAIFTICFAIINVVVFIQPYWIGDSVSTPQVGYFG
LFHQCVGRGPPNRELTCTGSFAEFSSIPSGAFKAASVFVFLSMVLILGCIACMALFFFCN
TATVYKTCAWMQLLCAVCLVLGCIIFPDGWDAEVVRDLCGEETGKYTLGNCSVRWSYILA
IIGILDALILSFLAFVLGNRQNNMFLEEHKADNNKDFAVSGVSDFIEVRDRRSDPRYVGV
QRLY
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgttgccttcacaagaagccgccaagatttaccatgataactacatgcggaactcccgt
gccatcggggtactctgggcgatattcaccatatgctttgctatcatcaacgtggtggtc
ttcattcagccctactggatcggggacagtgtgagcacgccgcaagtgggttacttcggc
ttgttccaccagtgcgttggaagaggacctcccaaccgagagctcacctgcacgggcagc
ttcgccgagttcagctccatcccctccggcgccttcaaagcggcctcggtatttgtgttt
ctgtccatggtgctgattctgggctgcatcgcctgcatggcgctcttcttcttctgcaac
accgctaccgtctacaagacctgtgcctggatgcagctcctatgtgctgtatgcctggtg
ttgggctgtataatctttccagacggctgggatgcagaggtggtgcgggacctgtgtggg
gaggagacggggaagtataccctgggtaactgctctgtccgctggtcttacatccttgct
attatcggcatcctggacgccctgatcctctccttcctggccttcgtcctgggaaacaga
cagaacaacatgttcctggaggaacataaggctgacaacaataaagattttgctgtgtcc
ggggtaagtgacttcattgaggtccgggacagaagaagcgacccaaggtatgttggagtc
cagcggttgtactga
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