Coregonus clupeaformis (lake whitefish): 121545924
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Entry
121545924 CDS
T08357
Name
(RefSeq) EH domain-containing protein 1-like
KO
K12483
EH domain-containing protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121545924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121545924
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121545924
Membrane trafficking [BR:
cclu04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
121545924
Exosome [BR:
cclu04147
]
Exosomal proteins
Proteins found in most exosomes
121545924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5600
EH
Dynamin_N
EHD_N
MMR_HSR1
EF-hand_1
GTP_EFTU
EF-hand_7
FeoB_N
AAA_16
EF-hand_6
Roc
PIN_5
AAA_28
EF-hand_5
TsaE
Gtr1_RagA
AIG1
AAA_22
DUF7375
Motif
Other DBs
NCBI-GeneID:
121545924
NCBI-ProteinID:
XP_041712782
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All DBs
Position
3:6770598..6780461
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AA seq
534 aa
AA seq
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MFRSRDKKTPEPFQDVSQGLKKLYRTKLFPLEDSYQFHDFHSPALEDADFDNKPMVLLVG
QYSTGKTTFIRHLMEQDFPGMRIGPEPTTDSFIAVMHGDQDGMIPGNALVVDPKKPFRKL
NAFGNAFLNRFTCAQMSNPVLESISIIDTPGILSGEKQRISRGYDFAAVLEWFAERVDRI
ILLFDAHKLDISDEFSEVICALKNHEDKMRVVLNKADQINTQQLMRVYGALMWSLGKIIN
TPEVVRVYIGSFWAQPLLIPDNRKLFEAEEQDLFQDIQGLPRNAAIRKLNDLIKRARLAK
VHAYIISSLKKEMPSMFGKENKKKELIANLGETYLKIEREHQISPGDFPKLKKMQELLAG
HDFSKFSTMKPKLLEAVEDMLANDIARLMTLVRQEEAAMPSQAVHGGAFEGTMSGPFGHG
YGEGAGEGIDELEWVVGRDKPSYDEIFYTLSPINGKVSGAAAKKEMVKSKLPNTVLGKIW
KLADVDKDGYLDDEEFALANHLIKVKLEGHELPGKLPEHLVPPSKRHQEIDMGE
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcagtagggataaaaaaacgccagaaccgttccaggatgtttcgcaaggtttg
aagaaactttaccggactaaactctttcccctagaggacagctaccaattccacgacttc
cactcaccggcgctcgaggatgccgacttcgacaacaaacccatggttctcttggtcggt
cagtactcgaccgggaaaactacttttattcggcacctgatggagcaagacttccccggt
atgaggatagggcccgagccgacgacagactctttcatagccgtgatgcacggtgaccag
gacgggatgatacctggcaacgccttggttgtcgaccccaaaaaacccttccgcaaactc
aacgcgtttgggaacgcgttcctcaacagatttacgtgtgctcagatgtccaacccggtc
ctggagagcatcagtatcattgatacccctggaatcctgtcaggggagaaacagaggata
agcagagggtatgactttgcagcggtactggagtggttcgcggaacgtgtggaccgcatt
atcctcctgtttgatgcccacaagctggacatctcagacgagttctctgaggtgatctgc
gccctgaaaaaccacgaggacaagatgcgcgtggtgctgaacaaggctgaccagatcaac
acgcagcagctgatgagagtctacggcgccctcatgtggtcgctggggaagatcatcaac
acccccgaggtggtgagggtgtacatcgggtcgttctgggcccagcctctcctgatccct
gacaataggaagctgtttgaggctgaggaacaggacttgttccaggacatccaggggctt
ccccggaacgcagcgatacggaaactcaacgacctcatcaagagggcacggctggctaag
gtccatgcctacatcatcagctctctgaagaaggagatgcccagtatgtttgggaaggag
aacaagaagaaggaactgattgccaacctgggagagacgtacctgaagatagagagggaa
catcagatctcccccggagacttccctaaactcaagaagatgcaggagctcctggctggc
cacgacttctctaagttctctaccatgaagcccaagctgctagaggctgtggaggacatg
ttggccaacgacatcgcccgcctcatgaccctggtccgccaggaggaagccgccatgccc
agccaagctgtccacggaggcgccttcgagggcaccatgtctggccccttcggccacggc
tatggagagggagccggggaaggcatcgacgagctggagtgggtggtgggccgggacaaa
ccctcgtacgatgagatcttctacacgctgtcgccgatcaacggtaaagtgtcgggcgcg
gcagccaagaaggagatggtgaagtccaagctgcccaacacggtcctgggcaagatctgg
aagctggccgacgtggataaggatggttacctggacgacgaggagtttgcgttggccaat
cacctgatcaaggtgaagctggaggggcatgagctgccggggaagcttccggaacacctg
gtgccaccttctaaacgccaccaggagattgatatgggagagtga
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