Coregonus clupeaformis (lake whitefish): 121545974
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Entry
121545974 CDS
T08357
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-2-like
KO
K04806
nicotinic acetylcholine receptor alpha-4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121545974
04082 Neuroactive ligand signaling
121545974
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121545974
Ion channels [BR:
cclu04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
121545974
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
121545974
NCBI-ProteinID:
XP_041712865
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Position
30:413387..434195
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AA seq
584 aa
AA seq
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MMTTNVWVKQEWNDYKLRWNPEDYENVTSIRIPSEIIWRPDIVLYNNADGDFAVTHLTKA
HLFHDGHIKWMPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDRAKIDLIGMASDVDQM
DYWESGEWVIINAVGKYNTKKYECCTEIYPDITYYFIIRRLPLFYTINLIIPCLLISCLT
VLVFYLPSQCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMIFVTLSI
IITVFVLNVHHRSPRTHCMPHWVRRVFLDLVPRVLFMKRPPATARQNCRKLIEMMDQTSS
STAAGQSQSFWAGVETGLGQLGQLGHTLPATHSDSPIILTLSPSSSPSPPQGLLLEEHPP
KAPQLCCRSASSKYSILLEEHSKLGNTASPLSCTTHSSTPSSSSSPPSLPLGPLGPLHSL
SRVEPRILAPNRWSHSVEHVFDHQREPNQEPPQMTEHHCRSRSFNKEGCGAAVGGKGRGA
VGGGRLKRQILLDHLGRASSTKPTMALGTWETVIPTISPSMRRAIEGVQYIADHLRAEDA
DFLVKEDWKYVAMVIDRIFLWMFVLVCILGTLGLFLPPWLAGMI
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgaccaacgtctgggtgaaacaagagtggaatgattacaagctccgctggaac
ccagaggactacgagaacgtcacctccatccgcatcccctcagaaatcatctggaggcct
gacattgtactttataacaacgctgatggtgacttcgcagtgacccacctgaccaaggcc
cacctgttccacgacgggcacatcaagtggatgccgccggccatctacaagtcctcctgc
agcatcgacgtcaccttcttccccttcgaccagcagaactgtaagatgaagtttggctcg
tggacctacgaccgggccaagatcgacttgatcggcatggccagtgacgtggaccagatg
gactactgggagagtggcgagtgggtgatcatcaacgctgtgggcaagtacaacaccaag
aagtatgagtgttgcaccgagatctaccccgacatcacctactacttcatcatccgcagg
ctgccgctcttctacaccatcaacctgattataccatgtttgttaatctcctgtctgact
gtcttggtgttctatctgccctcccagtgtggcgagaagatcactctgtgtatctctgtg
ttgctgtctctcactgtcttcctcttgctcattaccgagatcatcccgtccacctcactg
gtcatcccgctcatcggcgagtacctcctcttcaccatgatctttgtcaccctctctatc
atcatcaccgtcttcgtgctcaacgtgcaccatcgctcaccgcgcacccactgcatgccc
cactgggtgcggcgggtcttcctggacctggtgcctcgcgtgctcttcatgaagcggccc
ccggccactgccaggcagaactgccggaagctgattgagatgatggaccagaccagctcc
tcgacagcagccggtcagtcccagtctttctgggccggggtggagacggggctaggacag
ctaggacagctggggcacactctccctgccacgcactctgacagccccatcatcctgacc
ctctctccttcgtcctctccctctccaccccagggcctgcttttggaggagcaccccccc
aaggccccccagctctgctgccgctccgcctccagcaagtactccatcctcctggaagag
cattccaagctggggaacaccgcctcccccttgtcctgcacaacccactcctccaccccg
tcctcctcctcctcccccccgtctctgccgctgggtcccttgggccccctacactctctg
tcccgggttgagccgcggatactggcccccaacaggtggagccatagtgtagagcacgtg
tttgaccaccagagggagccaaaccaggagcccccccagatgaccgagcaccactgccgc
tcccgcagctttaacaaagaggggtgtggggccgctgttggtggcaagggccgaggggct
gtaggtggaggaaggctaaagagacaaatcctgctagaccaccttggtagagcctcctcc
actaagccaaccatggctctaggtacctgggaaaccgtgatccccacaatatctccgtca
atgagaagggccatagagggcgtgcagtatatcgctgaccacctcagggcagaggacgct
gacttcttggtgaaggaggactggaagtatgtggccatggtcattgacaggatatttctc
tggatgtttgtactggtgtgtatactgggaacattgggactatttcttcctccttggctg
gctggaatgatctag
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