Coregonus clupeaformis (lake whitefish): 121545989
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Entry
121545989 CDS
T08357
Name
(RefSeq) bromodomain and PHD finger-containing protein 3
KO
K11350
bromodomain and PHD finger-containing protein 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121545989
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
MOZ/MORF complex
121545989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPL1
zf-HC5HC2H_2
Bromodomain
zf-HC5HC2H
PWWP
PHD_2
PHD
FYVE_2
PHD_NSD
C1_1
DNA_topoisoIV
GP67
Motif
Other DBs
NCBI-GeneID:
121545989
NCBI-ProteinID:
XP_041712880
LinkDB
All DBs
Position
30:complement(9872744..9913896)
Genome browser
AA seq
1254 aa
AA seq
DB search
MRKPRRRGHLAGGGDCGGRKSDQAGRGRGGPRQRSPSPYSLKLSPTRETLTYSQTQKVVE
VDLDGRLHRISIVDRLTVITEDEMMAQDIAECNSNKENSKQPLAPANPGSKPPAMPRGLK
KYSKHASSTSSSSSSTPQNYCPNAHSQPYYKTNSSSHNHHHTPLPEPTFRMLETFSPCAV
PPLPVAYYRYIERSAEEQEAEAEYDMDDEDAAWLEMVNTRRTSDGHATISPDTFELLVDR
LEEESYREARSRAPSQSAIDDDAFCCVCLDDECLNSNVILFCDACNLAVHQECYGVPYIP
EGQWLCRCCLQSPQRPVDCVLCPNRGGAFKQTSDGRWAHVVCAIWIPEVCFANTVFLEPV
EGVDNIPPARWKLTCYLCKQKVRGAAIQCHKANCYTAFHVSCAQRAGLFMKIDPVRETNI
NGTTFSVKKTAFCEAHSPPGQEEGVVGSDEEETTGRVMGGLASRGRSAYTESPLVQKRSK
KEVKQGKRKGKKDLEAAACRSATTPMVTVPQIPSQRLNNICKGILVQRKKQFMQRLHNYW
LLKRQSRNGVGLIRRLHSHVQSQRHIEQPEQDKKVCAVREELKYWQKLRHDLERARLLVE
LIRKREKLKREQVKVHQAALELQLTPVQVLLRSTLDKLQEKDVGQIFAQPVNLKEVPDYL
EFISQPMDFTTMRSKLEVHSYDSVAYLEADFNLMVANCLLYNAKDTLFHRAALRLRDLGC
AILRHAQRKAHNTGLDPATGMHLAESPQKHDYFRSTWEDVDTLLDPENRLHMSPEEQLKE
LLDKLDVVTAVRSSGAHTHRIHLLRREINSIRYRQGQHHRHSLFNGDKEEDEDEEEKDEE
VDSGLFSSDKEDLKYTPPPLLEPTCLAPHPLQRDTPLEPPTLRPMTGEPRTLGHPNKRLK
LDSESSDNGTPTLAATGNYDCTKAEEARSLHCGGPVVNGLSDHSPSHPVTTGVGRRTSVL
FKKAKNGAKLLREKERDNLLLNGKAGEAVTSSSASPNPNSALSTPLSTPSKTPQQTPTPS
SFTTPEWGNPSRGAISEVELDKMSNHTLESGLTNGFTKHKDGGSDSDCSPLPILHKEISS
PPKRSLGKPALSKVQFLDTVNGDADYTATGSSILMPFENGAALESLDLVWAKCRGYPSYP
ALIIDPEMPKEGLLHNGVPIPVPPLDVLQLGEQRTEEAGEKLFLVLFFDNKRTWQWLPRD
KVTPLGVDDTADKLHMMEGRKTTIRKSVQVAYDRAMVHQSRVRHDQAFVTSNYL
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagccacgccggaggggccacctggccggtggaggggattgtggtgggaggaag
tctgaccaagctggtagggggcgaggagggccccgccaacgctccccctcaccctacagc
ctaaagctgtcccccaccagagagacgttaacttactcccagacccagaaagtggtggaa
gtggacttggacggcaggctccaccggatctccattgtggaccgtctgactgtcatcaca
gaggacgagatgatggcccaggacatcgcagagtgcaacagcaacaaagagaacagcaaa
cagcccctcgcaccagccaaccccggaagcaagccacctgccatgcccagaggcctcaag
aaatactccaaacatgcctcctccacatcatcgtcgtcctcctccacccctcagaactac
tgccctaacgctcactcacaaccttactacaaaaccaactcctcctcacacaaccatcac
cacacccccctccctgagcccacctttcgcatgctggagaccttcagcccttgtgctgtg
ccccctctgcctgtggcctactaccgctacatagagcgctcagcggaagagcaggaggcg
gaggcagagtatgacatggatgatgaggacgcggcctggctggagatggtgaacactagg
cggacgtcagacggccacgccaccatctcccccgacaccttcgagcttctggtggaccgc
ctggaggaggagtcataccgggaggctcgcagccgggctccctcacagagcgccatcgat
gacgacgccttctgctgcgtgtgcctggacgacgagtgcctcaacagcaatgttattctc
ttctgtgacgcctgcaacctggccgtgcaccaggagtgctacggcgtgccctatatccct
gagggtcagtggctgtgccgctgctgcctgcagtctccccagcggcccgtggactgtgtg
ctctgtcccaaccggggtggtgcctttaagcagaccagcgacgggcgctgggcccacgtg
gtgtgcgccatctggatccctgaggtgtgcttcgccaacacagtgttcctggagcccgtg
gaaggggttgacaacattccgcccgcccggtggaagctcacctgctacctgtgcaagcag
aaggtccgcggcgctgcaatccagtgccacaaggccaactgctacacagctttccacgtc
tcatgcgcccagcgcgccggcctcttcatgaagatcgaccccgtgcgcgagaccaacatc
aacggcaccaccttctcggtgaagaagacagccttctgcgaggcacactcgccgcccggc
caggaggagggcgtagtggggtcggacgaggaggagaccactgggagggtgatggggggc
ctggccagccgagggcgcagtgcctacactgagtccccactagtgcagaagcgaagcaag
aaggaggtcaagcaggggaagaggaaggggaagaaggatctggaggcggctgcctgtcgt
tccgccactacaccgatggtcacggttccacagatcccctctcaaaggttaaacaacatc
tgcaaagggattcttgtccagaggaagaaacagttcatgcaaaggctgcacaactattgg
ctcctgaaacgccagtcacggaacggggtcggactcattcgtcgcctgcactcccacgtc
caatcacagaggcacattgaacagccggagcaagataagaaggtgtgtgctgtgagggag
gagctgaagtactggcagaagttgcgacacgacctggagagagcccggctattggtggag
ctcatccgcaagcgggagaaactgaagagagagcaggtcaaggttcaccaggcggccctg
gagctacagctgaccccggtgcaggtgttgctgcgctccacactggacaagctgcaggag
aaagatgtgggccagatatttgcacagcccgtcaatctcaaggaggtcccagactatctg
gagttcatcagccagcccatggacttcaccaccatgcgctccaagctggaagtccacagc
tacgactcggtggcctacctggaggccgacttcaacctgatggtggccaactgcctgctg
tacaatgccaaggacacactgttccaccgcgccgccctgcgactccgcgacctgggctgc
gccatcctccgccacgcccagcgaaaggcccacaacacgggcctggacccggccacggga
atgcacctcgccgagtcgccccagaaacatgactacttccggagcacctgggaggacgtg
gacactctgctggaccccgagaaccgtctgcacatgtcgcccgaggagcagctgaaggag
ctgctggacaagctggacgtagtgaccgccgtgcgctccagcggcgcccacacccaccgt
atccacctcctgcggcgcgagatcaacagcatccgctatcgacaaggccagcaccaccgc
cactcgctcttcaatggagacaaagaggaagacgaagacgaagaggagaaagacgaagag
gtcgacagcggcctgttttcttcagataaagaggacctcaaatataccccacccccattg
ctggagccaacgtgcctggcacctcaccctctgcagagagacacgcccctggagcctccc
accctgcgccccatgactggggagccaaggaccctgggccatcccaacaagcgtctgaaa
ttggacagcgagagctcagataatggtacacccacccttgccgctacagggaattatgat
tgcactaaagcagaagaggcgcgcagtttgcactgtggagggccggtggtcaacggcctt
tctgaccattcgccctcacaccccgtcacaacgggagtagggcggcggacttctgtgctt
ttcaaaaaagcaaaaaacggagcaaagctgcttagagagaaagagagagacaatctttta
ctgaatgggaaagctggggaggcagtcactagcagcagtgcctccccaaaccccaactca
gctttaagtaccccattatccaccccgtctaagaccccccagcagaccccgaccccgtcc
tcattcaccacccccgaatgggggaaccctagtcgaggtgccatctcagaggtggagctg
gacaagatgtctaaccatacactggagagtggactcaccaatgggttcacaaagcacaaa
gatggtggttctgactcagactgtagccctctcccaatcctccacaaagaaatcagctca
ccacccaaacgtagcctcggaaaaccagcactttccaaagtacagttcctggatactgtt
aacggggatgcagattacaccgctacaggcagtagtatcctgatgccttttgagaacggc
gcggcgctggaatccctggacttggtctgggccaagtgtcgggggtacccctcctaccct
gcattgataattgaccctgagatgcccaaggagggcttgttgcacaacggggtgcccatc
cccgtgccgccgctggacgtcctgcagctgggggagcagaggacggaggaggccggggag
aagctatttttggtgctcttcttcgacaacaagaggacatggcagtggctaccacgggac
aaggtgactcctctgggtgtggacgacacggctgacaagctgcacatgatggagggcagg
aagaccacgatccgcaagtctgtgcaggtggcctacgaccgcgccatggtccaccagagc
cgcgtgcgccacgaccaagcctttgtcacctccaactacctgtag
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