Coregonus clupeaformis (lake whitefish): 121545990
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Entry
121545990 CDS
T08357
Name
(RefSeq) histone-lysine N-methyltransferase PRDM16-like isoform X1
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00310
Lysine degradation
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
121545990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121545990
03036 Chromosome and associated proteins [BR:
cclu03036
]
121545990
Enzymes [BR:
cclu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
121545990
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
121545990
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
121545990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
PRDM2_PR
zf-C2H2_jaz
zf-C2H2_6
zf-met
zf-C2H2_11
zf-H2C2_5
Zap1_zf1
SET
zf-BED
DUF7128
Motif
Other DBs
NCBI-GeneID:
121545990
NCBI-ProteinID:
XP_045065353
LinkDB
All DBs
Position
30:complement(9193706..9629264)
Genome browser
AA seq
1388 aa
AA seq
DB search
MRSKARARKLAKNDSEPVDSMHETEAHLLAGGGESGEEETEDSIMSPIPVGTLSPHPNNH
HHLPHHHHSHHHHHEDPFTPKEGSPYEVPVYIPDDIPVPSDLELRESSVPGVGLGIWAKT
RIGSGEHFGPHSTLQSATVKDSSFGWEQMLNDHEVMSSPESCIKKVVDEMGSVKFCLDEG
SEAGGSWLKYVRTAPSFEEQNLAACHLSGDQIDYKAIRDIEVGEELLVYMKEGIFPEGSM
APNLEDEQMYRCEDCDELFTSPLELRRHQKYSCSSAGSLFNTLSKEDFKQERDDSDHEPV
HECKDCEKIFPNEYSLGQHMIVHTEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFECE
NCDKVFTDPSNLQRHIRSQHVGARAHTCPECGKTFTTSSGLKQHKHIHSSVKPFICEVCH
KSYTQFSNLCRHKRMHADCRTKIKCKECGQMFSTTSSLNKHRRFCEGKNHYGPTGVLFAP
GIPMSSSILARSHPHHHQPGLNHSGLAFPDYFPSRPHLHASLPFSPGPHGFPSLSHGFPG
LFAPSLYPRPPSLPPSPLLKSPLGNNSNNGGSQEGKLPHSPLDGPPLSLINSIINNNNNG
GDSLLSSQEREDKERLELAYSEVKAKAKMSEVSDGSDLEDVNTTSGTDLDTTTGTASGSD
LDSDAESEREQRERISGTKRRKEAGVGGAGGTESAGQDWRPDDVSSGSVSAVSSSVNLAC
ERPSFLSVASQHSFFPPPDEQALPPTRGTTATDSIKAIASIAEKYFGPGLMGLQEKKMGS
LPCHSMFPFQFLPNFPHSLYPFAERAGALNPGMFFKSEPKSPHVQHPPPHKMAAPRTGEP
TPFDLTTKPKKAKPTPPPPAMPTPPSGSSNPPLILPGDEEQPLDLSIGSRRRDGHNGVVA
PEQPSSRKNHHKEEHPGRHLHPHTQHPQGQPPQPQQPSLHYAKPSSFFMDPIYSRVEKRK
LLDPLGALKEKFPRPNPLLFHPQLQYLYHGTPSLPQMSAMENMTEKLESFGALKLDAPPN
LLQHSAHPLFNFRSPPPSLSDAILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYR
CKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKKHEHENLPVSQH
SGILSNLGTNISSPNSEPDNHGLLNEKEDSYFSEIRNFISKSEMNQASSSTDKRSELAEE
ERPSSHGLSNSKTAARGLEEEEAEGEDEEEEEGSLTEKSQDEAPESPSPITMVTPGAYED
EEEEAEEEEEATPLAMSYEHTRRCIEEDGGLLDQEALPSFPKGLDLHKANSGEEPPFDVK
DIFNTASLESEALKETLYRQAKTQAYAMMLSLSENNPLHASSQNSLDAWLSMGGGPAETS
SFYPLNHI
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atgagatccaaggctagggcgagaaaactggccaaaaatgacagtgagccagtggacagc
atgcacgagacagaggcccacctcctggcgggagggggtgagagtggggaggaggagacc
gaggacagcatcatgtcccccatccccgtaggaaccctgtccccgcaccccaacaaccac
caccaccttccccaccaccatcacagccaccatcatcaccacgaggacccgttcacgccc
aaggaaggctcgccctacgaggtgcccgtctacattcccgacgacattcccgtccccagc
gacctggagctgcgtgagtcctcggtgcccggagtgggcctggggatatgggccaaaacc
cgaattgggtcgggagagcacttcggacctcacagcacactgcagagcgccacggtcaaa
gacagctccttcggatgggagcagatgctgaatgaccacgaggtgatgtcctctccggag
agctgcatcaaaaaggtggttgatgagatgggcagcgtcaagttctgcctggacgaaggc
tcggaggccggtgggagctggctcaagtatgtacgcaccgcaccttccttcgaggagcaa
aacctggcggcgtgtcacctcagcggagaccagattgattataaagctattagggatatt
gaagtgggagaggagctattggtgtatatgaaggaaggaattttcccagaaggatcgatg
gcaccaaacctagaagacgagcagatgtaccgctgtgaggactgtgacgagctgttcacc
tcgcccctggagctgcggcggcaccagaagtactcttgttccagtgccggttccctgttc
aacactctcagcaaagaggacttcaagcaggagcgtgacgacagcgaccacgaacccgtc
cacgagtgcaaggattgcgagaagatcttccccaacgagtacagtctgggccagcacatg
atcgtgcacacagaggagcgggagtacaagtgtgaccagtgtcccaaggccttcaactgg
aagtccaacctcattcgccaccagatgtcccacgacagcggcaagcgcttcgagtgtgaa
aactgcgataaggtgttcacggaccccagcaacctgcagcgccacatccgctcgcagcac
gtaggggcgcgcgctcacacctgccccgagtgtggcaaaaccttcaccacctcctcaggc
ctaaagcagcacaagcacattcacagcagtgtcaagcccttcatctgcgaggtgtgccac
aagtcctacacgcagttctccaacctgtgccgccacaagcgcatgcacgccgactgccgc
accaagatcaagtgcaaggaatgtggccagatgttcagcactacttcctccctcaacaag
caccggcgcttctgtgagggcaagaaccattatggccctaccggggtcctgttcgctccc
ggcatccccatgagcagctcgatcctggccaggtcccacccccaccaccaccaaccgggc
ctcaaccactcgggtctggccttccctgactacttcccctcccggccccaccttcacgcc
agcctgcccttctcccccgggccgcatggcttcccctcgctctcccatggcttcccaggc
ctcttcgccccctcgctctaccctcggccgccctcactgccccccagcccacttctgaag
agccccctgggcaacaacagtaacaacggtgggagccaggagggcaagctgccccacagc
cccctggacggtcctccactgtctctgatcaactccatcatcaacaacaacaacaatgga
ggagatagtctcctcagcagccaggagagggaggacaaagagaggctggagctggcgtac
agcgaggtcaaggccaaagccaagatgtcggaggtgtcggacggcagcgacctggaggac
gtcaacaccaccagcggcaccgacctggacaccaccaccggcaccgcctcgggttcagac
ttagacagcgacgccgagagcgagcgggaacaacgggagcggatcagcggcaccaagaga
aggaaggaggcgggcgttggaggggcgggggggacagaaagtgcgggtcaggattggcgg
ccggatgacgtgagcagcggctcagtgtcggcggtgtccagctcggtcaacctggcttgc
gagcggccctccttcctctcggtcgcctcccagcactccttctttccacctccggatgag
caggcgctgccccccacaagaggcaccactgccaccgactccatcaaggccatcgcttcc
atcgccgagaagtactttggccctggtctcatgggcctgcaagagaagaagatgggctcg
ctgccctgccattccatgttccccttccagttcctacccaacttccctcactccctctac
cccttcgccgagcgggccggtgccctcaaccctggcatgttcttcaagtctgagcccaag
tcacctcatgtgcaacatccgccaccccacaaaatggctgcccctcgcaccggagagcca
acgcccttcgacctcaccaccaagcccaagaaggccaagccgacaccgccgccccccgcc
atgccgaccccacccagcggtagcagcaacccccccctcattctcccaggggatgaggag
cagccgctggacctgagcatcggcagccgcagacgggatgggcacaacggggtggtggcc
cctgagcagccgtccagccgcaagaaccatcacaaggaggagcaccccggcagacacctg
cacccacacacccagcacccccagggccagccgccccagccgcagcagccctccctgcat
tacgccaagccctcgtccttcttcatggacccaatatacagcagggtggaaaagaggaag
ctcctggaccctttgggagctttgaaggagaagttcccgaggcccaatccgcttctcttc
catccacagctacagtatctttaccatggtacaccttctttacctcagatgtcggccatg
gagaacatgacggagaagctggagagctttggcgcgctcaaactggatgccccgcccaac
ttgttgcagcactcagcccacccactcttcaacttccgctcgccgccgccctccctctct
gatgccatcctccgcaaaggcaaggagcgctacacctgcaggtactgtgggaagatcttc
cccaggtcagctaatcttaccaggcacttacggacacacacaggggagcagccctacagg
tgtaaatactgtgaccgctcgttcagcatctcctccaacctccagcggcacgtgcgcaac
atccacaacaaggagaagcccttcaagtgtcacctgtgcaaccgctgcttcggccagcag
accaacctggaccgccacctaaagaagcatgagcacgagaacctgcccgtgagtcaacac
tctgggatcctctccaatctaggaaccaacatttcctctcccaactccgagccagacaat
catggacttttaaacgagaaggaggactcgtacttctcggaaatccgcaacttcatttcc
aaaagcgagatgaaccaggcgtccagctccacagacaagaggtcagagcttgcggaggag
gagcgtccatcgagccacggcctgtccaactccaagactgcggcccgggggctagaggag
gaggaggcggagggagaagatgaagaggaggaagaaggcagcctgacggagaagtctcag
gacgaagcgcccgaatccccctccccgatcaccatggtcacgccgggggcgtacgaagac
gaagaggaggaggcggaggaagaggaggaagccacaccgttggctatgagctacgaacac
acccgcaggtgtatagaggaggacggtgggctgttagaccaggaggccctacccagcttc
cccaagggcctggacctgcataaggccaacagcggcgaggagcccccctttgatgttaaa
gacatttttaacaccgcctcactcgagtcagaagccctgaaagagactctgtacaggcag
gctaaaacccaggcttatgcaatgatgctttctctgtcggagaacaaccctttgcacgca
tcctcccagaactcactggatgcctggctgagcatgggagggggcccggccgagacgagc
agcttttacccactcaaccacatctag
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integrated database retrieval system
