Coregonus clupeaformis (lake whitefish): 121546001
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Entry
121546001 CDS
T08357
Name
(RefSeq) rho guanine nucleotide exchange factor 16
KO
K20688
Rho guanine nucleotide exchange factor 16
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121546001
Membrane trafficking [BR:
cclu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
121546001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_9
SH3_1
SOS1_NGEF_PH
PH
SH3_2
RHG20_PH
IQ_SEC7_PH
ECT2_PH
Motif
Other DBs
NCBI-GeneID:
121546001
NCBI-ProteinID:
XP_041712892
LinkDB
All DBs
Position
30:complement(8568349..8603721)
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AA seq
703 aa
AA seq
DB search
MSNRQSDVSMGDQAPLLLERRFSSDLQLDCHSTENHHGQPQGLPTSQAEPSLAEGSEGRE
PVFLSTQSAAAQKLGTQQLIPKSLAVASRHNKPRHHTTVVTFPLGLEVSSNTPSSRSRHS
AMGPDLSWEDYDSDGDGFSLRRNRRNKSYRAAVTSLDIDAMAKNRGSANTLKPVREDSRA
SSPGPARSPGRKRTLGRKRNQKHRGSFKDDPQLYQEIRERGLHPNSPSMEDDDFVHVEPP
EEDHSIVVKSYRPAQVTWSSLPQVKDTGILQRISAEERKRQEAIFEIITSEYSYLHSLSI
LVRHFKGSEALRKTITATEHHHLFSNIAVIEGVSKRFFEDLERRHQDNVVIQDISDIVQN
HAAHHFEPYIVYCSNETFQQRTLQKLLTNNTAFKEVLKQIEGSGESQGLPMISFLILPMQ
RVTRLPLLLDTICQKTPDKMAEYFAAVWALKAISKLVNSCNDGARRMERTEQMYTIQKQM
EFGKIKPFPLVSSLRWLQKRGELAVCTEELSIFWKAFSHKSYYLFLFNDVLIVTKKKSEE
SYVVMDYATLENVEVKSAEETEGQTSPPAKGGSAHLSLRLLMSSNREGRLEQIALVAESR
VDRARWVSALREHKQMENRTSTDGLPQYEATKAYMPKEPDELGLQQAEVVILLQIEDDWC
HGERMRDGERGWFPANCATEITNRAAMENNVQRMKRLRKETNV
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacagacagtcggacgtctccatgggcgatcaggcccccctcttgctggagcga
cgcttctcctccgacctgcagctggactgtcactcgacggaaaaccaccatggccaaccg
cagggcttgcccacatcccaggctgagccctcgttggccgaaggctccgaggggcgggag
cctgtcttccttagcacgcaaagcgctgcggcgcagaagctgggcacccagcagctcatc
cctaagagcctggcggtggccagtcgacacaataagccccgccaccacaccaccgtggtc
accttccccttgggtctggaggtctcctccaacaccccctcctccaggagccgccactct
gccatggggcccgatctttcctgggaggactacgacagcgacggggatggcttctcactg
aggaggaaccgcaggaacaagtcgtaccgagcggcagtgaccagcctcgacatagacgcc
atggcaaagaaccgagggagcgccaacacactcaagcccgtgagggaggacagcagagcc
tccagccccgggccggcacgcagtcccggacgcaagagaaccttggggagaaagaggaac
cagaagcataggggctctttcaaagatgatcctcagctgtaccaggagatcagggagcgg
gggctgcaccccaactctccaagtatggaggacgatgactttgtccatgtggagcctcct
gaggaagaccacagcatcgtggtcaagagctacaggccagcacaggtcacttggagctcg
ctaccacaggtgaaggataccggtattcttcagaggatctcggctgaggagcggaagcga
caggaggccatctttgagatcatcacgtcggagtactcatacctccacagcctcagtatc
ctggtgcgccacttcaaggggagcgaggcgctgcggaagaccataaccgccactgagcac
caccacctcttctccaacatcgctgtcatcgaaggcgtcagcaaaaggtttttcgaggac
cttgaaaggcgtcaccaggacaacgtggtgatccaggacatcagcgacatagtgcagaac
cacgccgcccaccactttgagccctacattgtgtactgctccaacgagaccttccagcag
aggacgctgcagaagctgctaacgaacaacactgcctttaaggaggtgctgaaacagatt
gaggggagcggcgagtcccaaggtctgcccatgatctccttcctcatcctccccatgcag
agagtcacccggctgccgctgctactagacaccatctgtcagaagactccagacaagatg
gcagagtactttgctgcagtgtgggccctgaaggccatcagtaagttggtgaatagctgc
aacgatggagcaaggcggatggagaggacagaacagatgtacactattcagaagcagatg
gagtttggcaagatcaagcccttccctctggtgtcgtcactgcgatggctgcagaagcgt
ggggagctggccgtctgcaccgaggagctcagtatcttctggaaggccttcagccacaag
agctactacctgttcctcttcaatgacgtgctcatcgtcaccaagaagaagagtgaagag
agctacgtagtgatggactatgccactctggagaacgtggaggtgaaatcggcggaggag
actgagggtcagacatcgccacccgccaagggaggctccgcccacctgtctctacggctg
ctgatgtcaagtaacagagaggggagactggagcaaatcgctctggtcgcagaatccagg
gttgaccgagctcgttgggtgagtgctctccgggagcacaagcagatggagaacaggacc
agtacagacggccttccgcagtatgaggccaccaaagcctacatgcccaaggagccagac
gagctaggcctgcagcaagcagaggtagtcatcctcctgcagatagaagacgactggtgc
catggagagaggatgagggacggagagagaggctggttccccgccaactgtgccactgag
atcaccaaccgcgccgccatggagaacaatgtacagcgtatgaagcgtctacgcaaggag
accaacgtttaa
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