Coregonus clupeaformis (lake whitefish): 121546007
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Entry
121546007 CDS
T08357
Name
(RefSeq) paired box protein Pax-7-like isoform X1
KO
K09381
paired box protein 3/7
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121546007
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
121546007
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
Pax7
HTH_23
Homeobox_KN
HTH_32
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
121546007
NCBI-ProteinID:
XP_041712902
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Position
30:complement(8257305..8454820)
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AA seq
475 aa
AA seq
DB search
MQSSLPGTVPRMMRPAPGQNYPRTGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKI
VEMAHNGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKRIE
EYKRENPGMFSWEIRDKLLKDGVCDRSTVPSGEASSVSSISRVLRTRFGKKDDEDDCDKK
DEDGEKKTKHSIDGILGDKGSRMDDASDVESEPDLPLKRKQRRSRITFTAEQLEELEKAF
DRTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPGSG
MPTLPTYQLQDSGYGTSTHSQDGSSTLHRPQPLPPSTIHQGGLSVGDSSSAYGLSSNRHG
FSSCSDSFMSPSAPSYHTDTVINSLSPQVMSIKSNLNSVPSQTQHDFSISPLHGSLESSN
SISASCSQRSSDQSIKTVDSMASSHSYYTPTYSTSSYSVDPVTTGYQYSQYGQSE
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcgtctttgccaggaacagtccctcgaatgatgcgaccagcgcctggacaaaac
tatccccgcacgggcttccctttagaagtgtcaactcccctgggtcaaggtcgggtgaac
caacttggtggagtattcatcaacggaaggcccctgccaaatcatatccgacacaagata
gtggagatggcccacaacggcatccgtccctgcgtgatctctcgacagctacgagtttcc
cacggttgcgtgtccaaaattctttgtcggtatcaagaaactggttccatccgacccggg
gcaataggaggaagcaaacccagacaggtagcaacgcctgatgtggagaaacggattgag
gagtacaagcgcgagaaccccggaatgttcagctgggagatccgagacaagctactgaag
gacggggtgtgtgacagaagcacagttccttcaggtgaggcctcatctgtgagttcaatt
agtcgtgttctgagaactcgatttgggaagaaagatgacgaagacgattgtgataagaag
gatgaagacggagagaagaaaaccaaacacagcatcgatggcattctcggcgataaaggt
agccggatggacgacgcctcggatgtggagtctgagccggacctgcccctgaagaggaaa
cagaggcgcagtcgcatcaccttcacggccgaacagctagaggagctggagaaggccttt
gataggacacactaccctgacatctacaccagagaagagcttgcccagaggaccaagctc
acagaggcccgtgtacaggtgtggttcagcaatcgacgggccaggtggcgtaagcaagcg
ggagccaatcagctggcggcgttcaatcacctgttgccgggcggattcccaggcagtggc
atgcccacgctacccacctaccagctccaagattctggctacggcacaagcacgcattca
caagacggtagtagcacgcttcaccgcccccagccgttaccgccgtccaccattcaccag
ggagggctgtcggtcggggacagtagctcggcctacggcctgtcatccaaccgccacggc
ttctccagctgctccgactccttcatgagcccctcggcgcccagctaccacacggacacc
gtcatcaacagcctctccccacaggtgatgagcatcaaaagtaacctcaacagtgtgccc
tcgcagactcagcatgacttctccatctcgcccctccacggtagcctagagtcatccaac
tccatctcggccagctgcagccagcgctcctcagaccagtccatcaagactgtggacagc
atggcctcctcccattcctactacacgcccacctacagcacgagcagctacagtgtggac
cccgtcacgaccggctaccagtacagccaatacggacagagtgagtag
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