Coregonus clupeaformis (lake whitefish): 121546013
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Entry
121546013 CDS
T08357
Name
(RefSeq) zinc finger protein castor homolog 1
KO
K25209
zinc finger protein castor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121546013
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121546013
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_CASZ1
zf-C2H2_CASZ1_1
Phage_YorO
Motif
Other DBs
NCBI-GeneID:
121546013
NCBI-ProteinID:
XP_045065314
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All DBs
Position
30:complement(7272179..7363438)
Genome browser
AA seq
2030 aa
AA seq
DB search
MKAERTFYTEKTSGQSKMAAKRKGGLKLNAICAKLSRQVVFDGRSQHAEGDLNVAENSER
RSSHYDDSSKRFETNLPEGLSLSQSLEEDQKRREAIEKWVNGEYGDKPPPSALDCREEQQ
QQQGFKSNNGEDRPPEGVYMVQPKGCSDEEDDALVEPEPMLDSQDGSYHDDKDSEDRPHK
EDVYMQSSSEPSSCQAPFSSPGEASVLRYYTANTMNEFLGMFDYNDLQVRDELAKKISVE
KLKAVTSGSNPSSLSSEEATRRARFSKYEEYIHKLKAGETLPWPIHPNPKPDDLNSKLAQ
DKNALLQAQVATSGGCHSGAEGQIYPSSLDHKQGQGQVHNIEHNPPPPNPTSHLQDLASR
ISKYDSFIQKLKMGESLRSQQNGNAYKRPSKYDLENIRYLHLFKPGKGNPYKTGKVSRPS
KYDIKNIQKLMPGRPEPSLMPSILSATPGNGGTQGTPTSASSAGATGHPRLTMDQMGHMG
FNTSDYVKSSFSKTDSITTGTVSSVKNGLPPEKSVTEDINLYQKYIGRSRQTFPKPPPPP
PPPPPYPEPPTTPPTFKRFSGRQHCGHVHCAYQYREHYHCMDPECNYQRFTSKQDMIRHY
NMHKKRDNSLQHGFMRFSPLDDCSVYYHGCHLNGKSTHYHCMQVGCNKVYTSTSDVMTHE
NFHKKNTQLINDGFQRFRATEDCGMVECQFYSQKTTHFHCRRPGCTFTFKNKCDIEKHKS
YHIKDDAYAKDGFKKFYKYEECKYEGCVYSKATNHFHCIRSGCGFTFTSTSQMTSHKRKH
DRRHIRSSGVIGLSSGGSFLVPKEEPGYESSNDDLMDFPAISSKNSSLSASPTTQQSSNR
PGAHLLATPNTTMSSSGGGHVGLKPTSSLSHSARMSSLLSQALPSNMPVALAMSNSALVG
VNKPFFPLMPRLPMQLPHSAASLISAVSSGSHSMPTDSLSQASCSSAGSDGAMASMPTSY
GSASSIMEKISASKGLISPMMARLAAAALKPSVNHQDTGNGLAGSLASRFNLVQVKQEPV
NHTSGASQDSIQQHSLDLSKKDHRQSQRDTLLSNESNGHPVPGNTSLLSSLMNKTELESG
QGADTLEATKYLSRIMTRPMPVKPIELWRTYLRRFDTANFCEAQCDFLQKVHFHCVVEEC
GALFSTVDGAIKHANFHLRATLKVKSEPHFNKAKDCGDGASVQPAAPVSKANNPTMDMAN
MSSSGGGYGSSHSLLVWKQLAGSIPQLNASMPNLPTNSPLAIISLENAKPQVKPGFLQFQ
DNDPCLATDCNYSNKFHFHCLFGNCKYVCKTSGKAESHCLDHINPNNHLVNVRDQFSYYS
LQCLCPNQHCEFRVRGHYHCLRPGCYFVTNITTKLAWHVKKHEKAERRAANGFNYFTMRE
ECGRLGCKYNQVNSHFHCIREGCQFSFLLKHQMTSHTRKHMRRMLGKNFDRVPSQVVSHS
QRADDMKHLSGMGSGPMGIHPGVTPGFSSMRDETDDYMDYMGEGSPLGFSSESSNQDRIC
NSTSVGNESSSLGPGCPVTTAPSTPTDTSAPQNALPLPPPPQLGLQSQAPSFPPALLRPP
IPSLPYLLSPSCLSYSLFSASLGATRSVVMPTNTPVFSPIIATPSPVKNDVPIVQDAAGN
TISIPMATSAKKRFWIMEDMSPFGKRRKTASSRKMLDEGIMLEGFRRYDLYEDCKDSGCQ
FSLKVTHYHCTCENCGYKFCGRTHMYKHAQHHDRVDNIVLDDFKRFKSSLSCTFPDCQFS
GNSTHFHCLRCGFRCTDSTKVTAHRKHHGKQDVISAAGFCQFSSSIDCEVADCKYKLKCS
HFHCTYPECKHTVVGMSQMDSHKHKHEKQERSEPPSVSPLQEGAQHMGVGVAAVPHASMG
IPPASLGGLPGLSHHNNNHAPSMFYPPARQTSDNNHPYPASLVSLDSSLNLGTDTSSSLF
FLKNAAGLGLNDSLDLRKKMQHHHNPSLTMAAGPNPTSPLDLPTPQDDTTGTSGDPEDDL
SPEEKANKEEEEEEDEDEAEEDLNTDSYEDSMPELDGDKDNGESFDASVN
NT seq
6093 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctgaaaggactttctacactgaaaagacctcaggacaatctaagatggccgcc
aaaaggaaaggtggcctaaaactcaatgcaatctgtgccaagctgagccgtcaggtggtg
ttcgacggaaggtcccagcatgctgagggagacctgaacgtggcagagaacagcgagcgc
aggagctcccactacgacgacagtagcaagcgattcgagaccaacctcccagagggcctg
agtctcagccagagccttgaagaagaccagaaacggcgtgaggccatcgagaagtgggtc
aacggggagtatggggacaaaccaccaccctctgccctggactgtagggaggaacagcag
caacagcagggattcaagtccaacaatggtgaggacagaccccccgagggtgtgtacatg
gtgcagcccaagggctgcagtgatgaggaggacgatgcgcttgtcgagcccgaacccatg
ctcgactcccaggatggcagttaccacgacgacaaggactcagaagacaggcctcacaag
gaggacgtctacatgcagtcatctagcgagccctcgagttgccaagcacctttctcctct
ccaggagaggcgtccgttctgcgatactacacagcgaacaccatgaatgagttcctgggc
atgttcgactacaacgacctgcaggtgagggatgagctggccaagaagatcagcgtcgag
aagctcaaagccgttacctcaggctccaacccgtcctccctgagcagcgaggaggccacg
cgtcgagcccgcttctccaagtatgaggagtacatccacaagctgaaggctggtgagacc
ctcccctggcccatccaccccaaccccaaaccagacgacctcaactccaagctggcccag
gacaagaatgctctgcttcaggctcaggtggccacctctggggggtgccactccggggcc
gagggacagatctacccctcaagtctggaccacaagcaggggcaagggcaggttcacaac
attgagcacaaccctccaccacccaaccccacctcccacctccaggacttggcctcccgc
atctccaagtacgactccttcatccaaaagctgaagatgggcgagagcttgcggagccag
cagaacggcaatgcctacaagaggccctccaagtacgacctggagaacatcaggtacctg
cacctcttcaagcccggtaaggggaacccctacaaaacaggaaaggtgagccgcccgtct
aagtacgacatcaagaatatccaaaagttgatgccggggaggcccgagccctcgctgatg
cccagcattctgtctgccacgccggggaatggagggacgcaaggcacccctacctcggcc
tcctccgccggggccactggccacccaaggctcaccatggatcagatgggccacatgggc
ttcaacacgtccgactacgtgaagtccagcttctccaagaccgactccatcaccacaggc
actgtatcctctgtcaagaatggcctaccaccggagaaatctgtcaccgaggacatcaac
ctgtaccagaaatatattggcagaagccgtcaaaccttcccgaagcccccaccaccacca
ccaccaccaccaccataccccgaaccccccaccacaccaccaacttttaaaaggttctca
gggcgccagcactgtggacatgtgcactgtgcctaccagtacagggagcattaccactgc
atggacccagagtgcaactaccagaggttcaccagcaagcaagacatgatcagacactac
aatatgcacaagaagagggacaactctctgcagcatggcttcatgcgcttcagcccactg
gacgactgtagcgtctactaccacggctgccacctcaacgggaagagcacccactaccac
tgcatgcaggtgggctgcaataaggtgtacaccagcacatccgatgtcatgactcacgag
aacttccacaagaagaacacccaactgatcaacgacggctttcagaggttccgtgccacc
gaggattgtgggatggtggagtgccaattctacagccagaagaccacccacttccactgc
aggcgcccgggttgcaccttcaccttcaagaacaagtgcgacattgaaaagcacaaaagc
taccacatcaaggatgacgcgtacgccaaggatggcttcaagaagttctacaagtacgag
gagtgcaagtacgagggctgtgtctacagcaaggccaccaaccacttccactgcatccgc
tcgggctgcggcttcaccttcacctccaccagccagatgacctcccacaagcgcaagcac
gaccgccgccacatccgctcctcgggcgtcataggcctctcctcaggcggttccttcctg
gtgcccaaggaggaacccgggtatgagtcgagcaatgacgacctcatggacttccctgcc
atcagcagcaagaactccagcctgagcgcctcgcccaccacccagcagtcgtctaacagg
cctggcgcccacctgcttgccacacccaacacgacgatgtcgtcctccggcggcggccac
gtcggtctcaagcccacctcctcactgtcacactcggcacgcatgtccagtctgctgtcc
caggcactgcccagcaacatgcctgtggcgctggcaatgtccaacagcgcccttgtcggc
gtcaacaagcccttcttcccgctcatgccccggctgcccatgcagcttccccattcggcc
gccagcctgatctcggccgtgtcatctggttcccactccatgcccactgactcgctgtcc
caggccagttgttcctcagcgggtagtgatggtgccatggcgtccatgccgacctcctat
ggctcggcctcttccatcatggagaagatctctgctagcaagggcctcatatcccccatg
atggccaggctggcagcggctgccctcaagccttccgttaaccaccaagacacagggaat
gggctggctggctctttggcgagtcggttcaatctggttcaagtgaagcaggagccagtt
aaccatacctccggggcctcccaggactccatccaacagcacagcctggacctgagcaaa
aaagaccacaggcagagtcaaagggacacactcctaagtaatgaatcaaacggacaccct
gtaccgggaaatacatctcttttatcctcacttatgaataagacggagttggagagcggc
caaggggccgacaccttggaggcaacgaagtacctgagccgcatcatgacgaggccaatg
ccagtcaaacccattgagctctggaggacatatctgcgcaggttcgacacggccaacttc
tgcgaggcccagtgtgacttcctgcagaaggtccacttccactgtgtagtggaggaatgt
ggggcactcttcagcacggtggacggagccatcaaacatgccaacttccacctacgagcc
acgctgaaagtgaaatcggagccccacttcaacaaggccaaggactgcggagacggagcg
tccgttcagcccgccgcccccgtctccaaggccaataaccccaccatggacatggccaac
atgtcgtcgtcaggcggtggctatggttcctcgcactccctgctggtatggaagcaactt
gcgggcagcatcccccaactcaacgcctctatgcctaacctgcctaccaactcgccgctg
gccatcatctctctggaaaacgccaagccacaggtcaaaccgggcttcctgcagttccag
gataatgacccttgcctggccactgactgtaattactccaacaagttccacttccactgt
ctctttgggaactgcaagtacgtctgcaagacctcggggaaagccgaatcccactgcttg
gaccacatcaaccctaacaaccacctggtcaacgttcgagaccagttctcctactactcc
ctccagtgtctctgtcccaaccagcactgtgagttcagagtgaggggccattaccactgt
ctgcgacccggctgctactttgtcactaacatcaccaccaaactggcctggcatgtcaag
aagcacgaaaaggcagagagacgcgcagccaacggcttcaactacttcaccatgagagag
gagtgtggcaggctaggctgcaagtacaaccaggtgaacagtcacttccactgcatccgt
gagggctgccagttctccttcctgctcaagcaccagatgacttcgcacacccgcaaacac
atgaggaggatgctgggaaagaactttgacagggttccatctcaggtcgtgtcccatagc
cagagggccgatgacatgaagcacttgtcaggcatgggctcaggccccatgggcatccat
ccgggtgtgactcctggcttctccagcatgagggacgagacagatgactacatggactac
atgggcgagggcagccccctgggcttctcctctgaatcctccaatcaggaccgcatctgc
aacagcacatccgtgggcaatgagagctcctcattaggaccaggctgcccggtcacaact
gctccctctacccccactgacactagcgctccccaaaacgcacttcctctaccacctcct
cctcagcttggacttcagtctcaggctccatcttttcctcctgccctcctccggcctcct
attccctcgctcccatacctcctctctccatcctgtctgtcatactcgctgttcagcgcc
tctcttggagccactcggagtgttgtcatgccaaccaacacaccagttttcagccccatc
attgccactccatctccggttaaaaatgacgtccctatagtgcaggatgctgcaggcaac
accatctccatccctatggccaccagtgctaagaaacgcttctggatcatggaggacatg
tccccctttggcaagcgacgcaagacggcttcgtcacgcaaaatgctggatgagggcata
atgctagagggcttccgccgctacgacctgtatgaggactgcaaggactccggctgccag
ttctccctgaaggtgacccactaccactgcacctgtgagaactgcggctacaagttctgc
ggccgcacgcacatgtacaagcatgcgcagcaccacgaccgcgtagacaacatagtcctg
gacgacttcaagcgtttcaagtcctcgctcagctgtactttcccagattgccagttctcg
ggcaacagcacccacttccactgtctgcgctgcggcttccgctgcacagacagcacaaag
gtgacagcccaccgcaagcaccatggcaagcaggatgtgatcagtgccgccggcttctgc
cagttcagctccagcattgactgcgaggtggctgactgcaaatacaagctcaagtgctca
cacttccactgcacctaccccgagtgcaagcacacggtagtgggtatgtcccagatggat
tcccacaagcacaagcacgagaagcaggagcgcagtgagcctccgtcggtgtcacccctc
caggagggggcgcaacacatgggggtaggagtggccgcagtgcctcacgcctccatgggc
attcctccagcctctctcggtggcctcccaggactctcccaccacaacaacaaccatgcc
ccatccatgttctaccccccagccaggcagacatctgacaacaaccacccctacccagcc
tccttggtcagcctggacagctccctcaacctgggcaccgacaccagcagctccttgttc
ttcctgaagaatgcagctggcctgggcctcaatgactcgctggacctgagaaaaaagatg
cagcatcaccataacccaagcctgaccatggctgccgggcccaaccccacatcgccgcta
gatctgcccactcctcaggacgacaccacgggaacatctggcgaccctgaagatgacctg
tcacccgaggaaaaggccaacaaagaggaggaggaggaagaggatgaggacgaggcggag
gaggatctgaacactgactcatacgaagattcgatgccagagctcgacggcgacaaggac
aatggcgagagttttgacgcttctgtaaactga
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integrated database retrieval system
