Coregonus clupeaformis (lake whitefish): 121546023
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Entry
121546023 CDS
T08357
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 2
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121546023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121546023
Membrane trafficking [BR:
cclu04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
121546023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
121546023
NCBI-ProteinID:
XP_041712933
LinkDB
All DBs
Position
30:complement(40969226..41014540)
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AA seq
1774 aa
AA seq
DB search
MQQQRLAQQQQKQEQTKSMFLSRALEKILSDKEVKRIQHSQLRKACQVALDEIKIELEKQ
KDGTVVPPRANYIEADKYVLPFELACQSKSPRIVSTSLDCLQKLIAYGHITGNAPDSSAP
GKRLIDRLVETICNCFQGPQTDEGVQLQIIKALLTAVTSPHIEIHEGTVLLTVRTCYNIY
LASRNLINQTTAKATLTQMLNVIFTRMETQAAMEALEKDRLCLPQQNPSPSPGQMSGGSL
RSDCTPDLNWTPSSAASTPDLNATPPAPDTPSINGQPEECKTEEGVATTEENREQTPPPE
GDHPPPIPPEHPEAMPPTPRTDRNQMNGIMGDRGSVSSTDILDAESIQGGQNTARFSHIL
QKDSFLVFRSLCKLSMKPLADGPPDPKSHELRSKVVSLQLLLSALQGAGPVFRTHEMFVN
AIKQYLCVALSKNGVSSVPEVFELSLAIFLTLLSHFKVHLKMQIEVFFREIFLTILETSS
SSFEHKWMVIQTLTRICADAQCVVDIYVNYDCDLNAANIFERLVNDLSKIAMGRSGQEMG
MTPLQELSLRKKGLECLVSILKCMVEWSREMYVNPNLQTNLGQERPSDGEGAELNLPDQL
ASRRDSVSSLDSTMSSSVQSSQPDHPEQYEVIKQQKDVIEHGIELFNKKPKRGVQYLQDQ
GMLGTTAEEIAQFLHQEERLDTTQVGEYLGENMRFNKEVMYSYVDLLDFCGRDFVSALRA
FLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTEFASADTAYVLAYSIIMLTTDLHSPQV
KNKMTKEQYIKMNRGINDSKDLPEEYLSSIYDEIAGKKIAMKDSKEHTITPKTSKHSIAN
EKQRRLLYNVEMEQMAKTANALMEAVSHAQAPFFSVTHLEHVRPMFKLAWTPLLAAFSVG
LQDCDDQEVASLCLEGIRCAVRIACVFSMQLERDAYVQALARFTLLTASSSITEMKQKNI
DTIKTLITVAHTDGNYLGNSWHEILRCISQLELAQLIGTGVKTRYISGVVRDSQAGIKGF
PTGGEEFMPLGLGTLVGGPDRRQMAHIQESVGETSSQSVVVAVDRIFTGSTKLDGNAVVD
FVRWLCAVSMDELASAHQPRMFSLQKIVEISYYNMNRIRLQWSRIWQVIGDHFNKVGCNP
NEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIVKKNRSPTIRDMVIRCVAQ
MVNSQAANIRSGWKNIFSVFHQAASDHDETIVDLAFQTTGHIVMITFQQHFAAAIDSFQD
AVKCLSEFVCNAAFPDTSMEAIRLIRHCAKYVADRPQALREYTSDDMNVAPGDRVWVRGW
FPILFELSCIINRCKLDIRTRGLTVMFEIMKSYGHTFEKHWWHDLFRIVFRIFDNMKLPE
QQTEKHEWMTTTCNHALYAICDVFTQFYEPLSEVLLADLFTQLQWCVRQDNEQLARSGTN
CLENLVILNGEKFSPEVWNVTCSCMLDIFQTTSPHGLLTWRPAGQEEEAGDGKHMDVDFD
TQSQSSYDRALSEKGGQSQISTASDETWKGKPHARVADQKLFAGLLIKCVVQLELIQTID
NIVFYPATSKKEDADNMAAAQVYHNDHRDALEEAAEEGEQGMYRHLSSQHLFKLLDCLLE
SHAFARDFNSSNEQRTALWRAGFKGKSKPNLLKQETSSLACSLRILFRMYCDRQLQDSWP
DIQTRLLLVCSEALAYFISLTSESHREAWTNLLLLLLSRTLRLTNDKFKPHASCYYPHLC
EMMQFDLIPELRAVLRHFFLRIGSVFHIAAPEMG
NT seq
5325 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagcaacgtcttgctcaacaacaacagaagcaggagcaaaccaagagcatgttt
ctgtctagggcgctggaaaaaatcctctccgataaggaggtgaagcggatccagcacagc
cagctgcgtaaagcttgtcaagtggcacttgatgaaatcaaaatcgagcttgagaagcaa
aaagatggcacagtggtcccgccccgagcaaactacattgaagctgacaaatatgtgcta
ccttttgagctcgcctgtcaatcaaagtccccacgcattgtcagcacatcgttggactgc
ctacagaagctcattgcgtatggccacatcacagggaacgcccctgacagtagtgctcca
gggaagaggctcatcgaccggctggtggagaccatttgtaactgcttccagggcccacag
acagacgagggggtgcagctgcagatcatcaaggctctgctgacggcagtgacctcccct
cacattgagatccatgagggaactgttctgctgacagtgcgtacctgttacaacatctac
ctggccagccgtaacctcatcaaccagaccaccgccaaggccacgctcacacagatgctc
aatgtcatcttcacccgcatggagacacaggcggctatggaggctctggagaaggataga
ctatgtctgccccagcagaacccctccccttcccctgggcagatgtctggtggttccctc
aggtcagactgcaccccagacctcaactggaccccctcttctgcagccagcacaccggac
cttaatgccacgcccccggccccagacacaccctccatcaatggccaaccagaggagtgc
aagactgaggagggtgtggctactacagaggagaacagagagcagacaccacctccagaa
ggggatcatcccccacccatacccccagagcaccctgaggcgatgccccctacacccagg
acagacaggaaccagatgaacggcattatgggtgaccgtggttctgtgtcctctacagac
atcttggatgcagagtccattcagggtggccagaacacagctcgtttctcccacatcctg
cagaaagattctttcctggtgttccgctccctctgcaagctctccatgaagccgcttgcg
gacggaccccctgacccaaagtcccatgagctgcgctccaaggtggtgtccctgcagctg
ctgctgtctgcgctccagggggcggggcctgtcttccgcacccacgagatgtttgtcaac
gccatcaagcagtacctgtgtgtggccctctctaagaacggtgtctcctctgtgcccgag
gtgttcgagctctcccttgccatcttcctcaccctgctctcccacttcaaagtccacctc
aagatgcagatcgaggtgttcttcagggagattttcctgaccatcctggaaacgtcatcc
agctcctttgaacacaagtggatggtcattcagacactgacacggatatgtgcagatgct
cagtgtgtggtggatatctatgtgaactacgactgtgacctgaacgctgcaaacatcttt
gagcgtctggtgaatgacctgtctaagattgccatggggaggagtggccaggagatgggg
atgacccctctacaggagttgagtctgcgtaagaagggcctggagtgtctggtgtccatt
ctgaaatgcatggtggagtggagcagagaaatgtatgtcaaccccaacctgcagaccaac
ctcggccaggagcggccgtcggatggtgagggtgcggagctaaatcttcctgaccagctg
gcgtctcgtagagacagcgtcagttctctggactccaccatgtcgtctagtgtccagtcc
tcccagcctgaccacccagaacagtatgaggtcatcaaacaacagaaggacgtcatcgaa
catggcattgagctgttcaacaaaaagcccaagcgaggtgtccagtacttacaagaccaa
ggcatgctgggaaccacagcagaggaaatcgcccagttcctgcatcaagaggagcgcctg
gatacgacccaggtaggggagtacttgggagaaaacatgcgtttcaacaaggaggtgatg
tacagctatgtggacctgctggacttctgtggccgggactttgtttctgctctgagggct
ttcctggagggcttccggctcccaggagaggcccagaagattgacaggctcatggagaag
tttgctgccagatatctggagtgtaaccagggacagacagagtttgccagtgcagacacg
gcctacgtcttggcctactccatcatcatgctcaccacagacctgcacagtccacaggtg
aagaacaaaatgacgaaggagcagtacatcaaaatgaaccgtggcatcaacgacagtaag
gacctgcccgaggagtacctgtcctccatatacgatgagatcgctggcaagaagatcgcc
atgaaggacagcaaggagcacactatcacacccaagactagcaagcacagcatagccaat
gagaagcagcgccgtctactgtataacgttgagatggaacagatggcgaagacagccaat
gccctgatggaggctgtgagccacgcccaggcccccttcttcagcgtcacccacctggag
cacgtccggcccatgttcaagctggcgtggacccctctcctggcagcgttcagtgtgggc
ctgcaggactgtgatgaccaggaggtggcctctctgtgtctggaggggatccgctgtgct
gtcaggattgcatgcgtcttcagtatgcagttggagagggatgcgtatgtccaagccttg
gctcggttcaccctgctcacagccagctccagcatcaccgagatgaagcagaagaacatc
gacaccatcaagaccctcatcactgtggcccacacagacggaaactacctgggcaactct
tggcatgagatcctgcggtgtattagccagctggagttggcccagctgattggcacgggg
gtgaagacgcgctacatctctggagtggtccgggatagccaggctggcatcaagggcttc
cccaccgggggagaggagttcatgcccctgggactggggaccctggtgggaggtccagac
cggaggcagatggctcatatccaggagtcagtgggagagaccagctctcagagtgtagtg
gtggctgtggacaggatcttcactggctccacaaagctagatggaaatgcagttgtggac
tttgtgcggtggttgtgtgcggtgtccatggatgagctggcctccgctcaccagccgagg
atgttcagtcttcagaagatagtagagatctcctactacaacatgaaccgtatccgtctg
cagtggtcacgcatctggcaggtcatcggagaccacttcaacaaggtgggctgcaacccc
aacgaggacgtggccatctttgcggtggactctctgaggcagctgtcaatgaagttcctg
gagaaaggagagctggctaacttccgcttccagaaggacttcctccggccatttgaacac
atcgtgaagaagaacaggtctcccactatcagggacatggtgatccgctgtgtggcccag
atggtcaactctcaggcagccaacatccgctccggctggaagaacatcttctctgtgttc
caccaggccgcttccgatcacgacgagaccattgtggacctggccttccagactactggc
cacatagtcatgatcacgtttcagcagcactttgcagcagccatagactccttccaggat
gcagtgaagtgtctgtctgagtttgtgtgcaacgctgcctttcctgacaccagtatggag
gccatccggctcatccgccactgcgctaaatatgttgcagaccggccgcaggctctgcgg
gagtataccagtgatgacatgaatgtggccccaggggaccgggtgtgggtgagaggctgg
ttccccatcctctttgagctgtcctgcatcatcaaccgctgcaagctggacatcaggacc
aggggtctgactgtgatgtttgagattatgaagagctacggacacacctttgaaaagcac
tggtggcacgaccttttccgcatcgtcttccgcatcttcgacaatatgaagcttcctgag
cagcaaacggagaagcatgagtggatgaccacgacctgtaaccatgccctgtacgctatc
tgtgacgtcttcacccagttctatgagcctcttagtgaggtcctgctggctgacctcttt
actcagctgcagtggtgtgtcagacaagataatgagcagttggcccggtcagggactaac
tgcctggagaacctggtcatcctgaatggggagaagtttagcccggaggtgtggaacgtc
acctgctcctgtatgctggacatcttccagaccaccagcccacacggcctgttgacgtgg
cgaccggctggtcaggaagaggaggctggcgatgggaaacacatggatgtagattttgac
acccagtcccagagcagctatgacagggccctgtcagagaaaggagggcagagccagata
tccaccgccagcgatgagacctggaaagggaaaccccatgccagggtggcagaccagaag
ctgtttgctgggctgctcatcaagtgtgtagtgcagctggagctgatccaaaccattgac
aacatcgtcttctacccggcaaccagcaagaaggaagacgcagacaatatggctgccgca
caagtttatcacaacgaccatagggatgccctggaggaggctgcagaggagggggagcag
ggcatgtacagacacctctcctcccagcacctattcaagctgttggactgcctgctggag
tcacacgccttcgccagagatttcaactctagcaatgagcagaggactgcactctggaga
gcaggatttaaggggaagtcgaagcccaatctgctgaagcaggagactagcagcctggcc
tgtagcctgcgtattctgtttcgtatgtactgtgaccggcagctgcaggactcctggcct
gacatccagacacgcctactgctggtgtgcagcgaggccctggcctatttcatcagcctg
acctcagagagccacagagaggcctggaccaacctgctcctactactgctcagtaggacc
ctgcgactgaccaacgataagttcaagcctcatgcctcctgttactaccctcacctgtgt
gagatgatgcagtttgacctgataccagagctccgtgccgtcctgcgccacttcttcctc
cgcatcggctcagtcttccacatcgctgctcctgagatgggctag
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