Coregonus clupeaformis (lake whitefish): 121546055
Help
Entry
121546055 CDS
T08357
Name
(RefSeq) potassium voltage-gated channel subfamily D member 1
KO
K04891
potassium voltage-gated channel Shal-related subfamily D member 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121546055
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Potassium channel, voltage-gated (Kv)
121546055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
DUF3399
BTB_2
Ion_trans_2
Shal-type
BTB_3
PKD_channel
Motif
Other DBs
NCBI-GeneID:
121546055
NCBI-ProteinID:
XP_041712994
LinkDB
All DBs
Position
30:complement(24491879..24553998)
Genome browser
AA seq
635 aa
AA seq
DB search
MAAGVATWMPFARAAAVGWLPLAQQTMPKPPVDKTSRSDEILFVNVSGLRFQTWKNTLDR
YPDTLLGSSEKEFFYNEETQEYFFDRDPEMFRHILNFFRTGKLHYPRHECIQAFEEELAF
YGIIPEIIGDCCMEEYRDRKKENQERLAEDTEAENAGDAPLPPDATLRDKLWRAFENPHT
STMALVFYYVTGFFIAVSVIANVVETVPCRPLKGSVKDLPCGEKFSVAFSCLDTACVLIF
SCEYLMRLYAAPSRCDFARSVMSVIDVVAILPFYIGLVMPENEEVSGAFVTLRVFRVFRI
FKFSRHSQGLRILGCTLQACASELGFLLFSLTMAVIIFATVMFYAEKGTKGTTFSSIPAS
FWYTIVTMTTLGYGDMVPDSIAGKIFGSICSLSGVLVIALPVPVIVSNFARIYHQNQRAD
KMRAQQKVRQARIRMAKKGATNAFLQHKEDGGLQGGDSDSTALCGKNRSAFEHQHHHLLQ
CLEKTTNHEFTDEVTYSEVCMMDSVGFRTSRSTSLSSQQGATTTCCSRRSKRRAIRLANS
TVSVSRGSVQELATLHITKTPVGTQYPQSRSNLNARTEDLKLNCDDYTAAIISIPTPPAN
TPDESLPNSPAIPGILRNSRSSTYNTQETVKISSL
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggctgctggagttgcaacatggatgccctttgctcgggcagcagccgtgggctggcta
ccactggcccaacagaccatgcccaagcctcctgtggacaaaacaagtcgcagtgatgag
atcctgtttgttaatgtgagtggactacgcttccagacatggaagaacaccttggaccgt
tacccggacacccttctaggcagctcagaaaaggagtttttctacaatgaggaaactcag
gaatatttctttgacagggatccagagatgtttcgccatatactcaacttttttcgaaca
ggcaagctacattatccccgacatgaatgcattcaggcctttgaggaggagctggctttc
tatggcataatacctgagatcataggtgactgctgtatggaagagtaccgggatcgtaag
aaggagaaccaggagcgtttggctgaggacacagaggcagagaatgccggagatgctcca
ctgcccccagacgccacgttacgagataagctatggagggccttcgagaaccctcacaca
agcaccatggccctggttttctactacgtcactggcttcttcatcgctgtgtctgttatt
gccaacgttgtggaaacggttccctgccgaccactcaaagggagtgtaaaggacctgccg
tgcggtgagaagttttcagtggccttctcttgtttggacacggcctgtgtgcttatcttc
tcctgcgagtacctcatgagactgtatgctgcccccagccgctgtgattttgctcgttcg
gtgatgagcgtgatcgacgtggtggccatcttgcccttctacattggccttgtgatgccc
gagaacgaggaagtcagcggggcctttgttaccctgcgagtcttccgggtgttccgtatc
ttcaagttctcccgccactctcagggcctgcgcatcctgggctgcacgctgcaggcctgc
gcctcggagctgggtttcctcctcttctccctcaccatggctgtcatcatcttcgccacc
gtcatgttctatgctgagaaaggcaccaagggaaccacgttttctagcatcccagcctct
ttctggtacaccatcgtcaccatgacaacactaggatatggagacatggttccagactcc
atagcaggcaagatatttggctccatctgctcgctcagtggtgtgctggtgatcgctcta
cctgtgcctgttatagtctccaacttcgcgaggatctaccaccagaaccaaagagcagat
aagatgagggcacagcagaaagtgcgccaggcaaggattcgaatggctaaaaaaggggcc
accaatgcattcttgcagcacaaagaggatgggggattgcagggtggtgatagtgacagc
acagctctttgtgggaagaacaggtccgcctttgagcaccaacatcatcacctattgcag
tgcttggagaaaactactaatcacgaattcaccgatgaagtcacctacagcgaggtgtgt
atgatggactcagtgggcttccgcaccagccgcagcacttccttgtccagccagcagggg
gccaccaccacctgctgctcccggcggtccaagaggagggctatccgccttgccaactcc
accgtatctgtcagccggggaagtgtgcaggagctggccacgctgcacatcaccaagact
cctgttggtacccagtacccacagagtcgctccaatctaaacgccaggaccgaagacctg
aagctgaactgtgatgactacacagcagccatcatcagtatccccactcccccagccaac
actcctgatgagagcctacctaactcgcccgccatccctggcatcctacgcaactctcgg
tccagtacctacaacacccaggaaactgtcaagatctcctctttataa
DBGET
integrated database retrieval system
