Coregonus clupeaformis (lake whitefish): 121546063
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Entry
121546063 CDS
T08357
Symbol
otud5a
Name
(RefSeq) OTU domain-containing protein 5-A isoform X1
KO
K12655
OTU domain-containing protein 5 [EC:
3.4.19.12
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
121546063 (otud5a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121546063 (otud5a)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121546063 (otud5a)
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121546063 (otud5a)
Peptidases and inhibitors [BR:
cclu01002
]
Cysteine peptidases
Family C85
121546063 (otud5a)
Ubiquitin system [BR:
cclu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
121546063 (otud5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OTU
Peptidase_C65
CRISPR_assoc
Motif
Other DBs
NCBI-GeneID:
121546063
NCBI-ProteinID:
XP_041713003
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All DBs
Position
30:46969662..47000263
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AA seq
548 aa
AA seq
DB search
MTILPKKKPNSSVGVSDHPDETDRRSGSDPHQHPHGGRTGARPRASPPPWSYQAAPPSAR
EDRRNEASSRPQQASPPPVVSGSPVGPGDGTGGIPCVAGTRGELSGSVGCGGGIGSCCSG
PGLSKRRRQATCSGVAGGGTPGVAGGGSGGPSADSEEGAGYNSEDEYENASRLQSEDPAT
VEQQEHWFEKALGEKKGFVIKKMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLTKNA
DYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQEGTEPINTFHGIHQN
NDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPALKPGQYVDQSLMKNAIKTSEESWIEQ
QMLEDKKRATDWEATNEAIEEQVARESYLQWLQDQEKQARQPRKASATCSSATAASSSGL
EEWSARSPRQRSSAPSPENTDPSHSDTSNKPPSPAGAALMSKPPSPCAPGPSNQACVGPD
RPTSSSLKSLYPALEYRAIMKEMSPTAFGLTDWEDDEILASVLAVSQQEYLDSMKKNSMH
REPSPDSS
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgacgattcttccgaagaagaagccgaactcgagtgtcggtgtttcggaccacccggac
gagactgacagaaggagtggctctgacccgcatcaacatccacacggaggtcgtacaggt
gcaagaccgagggcctcgccgccaccatggtcctatcaagccgctccaccttcggcaagg
gaggatagacggaacgaggctagctctcggccacagcaggcctctccgcctcccgtggtt
tcagggtctcctgttggacctggggatgggactggaggaataccatgcgttgctgggaca
cgcggagaactgtcaggcagcgttggctgtggtggaggaattggtagttgctgctcgggg
cctggtctgagtaaaaggcgacgacaagcaacctgctctggggtggccggtggtggaaca
cccggcgtagctggaggtggcagtggaggtcccagtgctgattcggaggaaggtgcgggt
tacaacagtgaagatgagtacgagaacgcatcgagactgcagtctgaggacccagctaca
gtggaacagcaggagcactggtttgagaaagcgcttggggaaaagaaaggcttcgtcatt
aaaaaaatgaaagaggatggagcatgtctcttcagagctgtcgctgatcaagtatatgga
gaccaagatatgcatgaagttgtccgtaaacactgcatggactacttgacaaaaaatgca
gactacttctcgaactacgtgacagaagacttcaccacgtacatcaacaggaagaggaaa
aacaactgccacgggaaccacatcgagatgcaggctatggcagaaatgtacaatcgacca
gtggaagtttaccaggaaggcacagaaccaatcaacacgttccatggcattcatcaaaac
aatgacgaaccaatcagagtcagctaccatcgtaacattcactacaactctgtggtgaac
cccaacaaagccacaattggagtagggcttgggcttcctgctttaaaaccagggcagtat
gtagaccagtcgcttatgaagaacgctattaagacctctgaggagtcgtggatcgagcag
cagatgctggaggacaagaagagagccacggactgggaggccaccaacgaggccatcgag
gagcaggtggccagggagtcctacctgcagtggctccaggaccaagagaagcaggcgcgc
cagccccgtaaggctagtgccacctgcagctcggccaccgcagcatcttctagtggtctg
gaggagtggagcgcccgctcgccccggcagcgcagctcagctccctcaccggagaacact
gacccctcccactcagacacaagcaacaagcctccctcccctgctggggcagcccttatg
tcgaagcccccttcaccttgtgccccaggtcccagcaaccaggcttgtgttgggcctgat
agacccacctcctcctctctgaagtctctgtacccggcactggaataccgtgctatcatg
aaagaaatgtcacccacagccttcggcttaacagactgggaggatgatgagattctggcg
tcagtcttggccgtttcacaacaagagtaccttgacagcatgaagaagaactcaatgcat
agagaaccctctccagacagcagttga
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