Coregonus clupeaformis (lake whitefish): 121546088
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Entry
121546088 CDS
T08357
Symbol
cacna2d3a
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04260
Cardiac muscle contraction
cclu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121546088 (cacna2d3a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121546088 (cacna2d3a)
04261 Adrenergic signaling in cardiomyocytes
121546088 (cacna2d3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121546088 (cacna2d3a)
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121546088 (cacna2d3a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA
VWA_2
VWA_3
MCP-like_PDC_1
dCache_2
VWA_CoxE
Phage_holin_6_1
Motif
Other DBs
NCBI-GeneID:
121546088
NCBI-ProteinID:
XP_041713038
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Position
30:45216188..45509850
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AA seq
1093 aa
AA seq
DB search
MPGDLNSMCSRVWSVCLLLVWICLGTRVVGVVGSHQGSIPLSVVKLWASAFGGEIKSISA
KYSGSQLLQKKYKEFERAVRVEEIDGLRLVKKLAENMEEMFHKKSEAMKRLVEAAEEAHL
QHEEDPDLQYEYFNAVLINEVDEEGNSMELGGDFLLQPNDHFNNLSVNLSLSVVQVPTNM
YNKDSAIVNGVYWSEALNKVFVDNFERDPSLIWQYFGSAKGFFRQYPGIKWRPDEHGVIA
FDCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNVIAYN
DEVHYVEPCLNGTLVQADVTNKDHFRMNLDKLLAKGIGMLDVGLTEAFEVLNDFNQTGRG
SVCSQAIMLVTDGAVDTYDAVFAKYNWPDRKVRIFPYLIGRESAFADNLKWMACANKGYF
TQISTLADVQENVMEYLHVLSRPKVIAQEHDTVWTEAYIDSTLPQAQKLEDGQGPILMTT
VAMPVFSTKNETRNKGILLGVVGTDVPVSELLKTIPKYKLGIHGYAFAITNNGYILTHPD
LRPLYEESKKRRKPNYSSVDLSEVEWEDKDDILRNAMVNRKTGTFSMEVKKTVDKGKRVL
VLHNDYYYTDIKGTPFSLGVALSRGHGKYFFRGNVTVEEGLHDLEHPDVELADEWTYCDT
DEHPEHRYLSQIEAIKLYLSGREPHLKCDKELIQEVLFDAVVTAPLEAYWTSLVLNKSEN
SDKGVEIAYLGTRTGLSRINLFVVPDQLTNQDFLTAEDKEGVFNADHFPLWYKRAAEQVP
GTFVYSLPFNTGKENNSVVLASTAIQLLDERQSPIAAAVGIQMKLEFFQRKFWTASRQCA
ALDGKCSISCDNENINCYLIDNNGFILVAEDYSLTGMFFGEAEGAVMNKLLLMGSFKRVT
LYDYQAICRIFAESSDGSRTLLDPYFAIFATVKWLLTELVIFMVEFNLYSWWYSDLTAKA
QRGDRTMLVPCDTEYPAFVSERTIKETTGNIDCEGCIKSFVIQQIPSSNLFMVVVDNKCD
CSEAVPITMDPIEIMHNESLKCERLKFQKDRRRPDSCHPFHPEENSMECGGALNLSPSLT
ATLLCLLLALFLR
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgccgggggatctgaactcgatgtgttctcgtgtgtggagtgtgtgtctgctcctagtt
tggatatgtcttggcacgagggtcgtcggtgtggtcgggtcgcaccaaggcagcatccct
ctctccgtggtgaagttgtgggcctcagcgttcggaggagagatcaagtccatctcagcc
aagtactctggttctcagctactgcagaagaagtataaggagtttgagcgagcggtgcgt
gtagaagagatagatggactgaggttggtgaagaagctggctgagaacatggaggagatg
ttccacaagaagtctgaagccatgaagcgtttggtggaggcagcagaagaggcccatcta
cagcatgaagaggacccagacctacagtatgagtatttcaacgcagttttgattaatgag
gtggatgaggaaggtaacagtatggagctgggaggagacttccttctgcaacccaacgac
cacttcaacaacctgtccgtcaacctcagcctcagtgtggtgcaggtgcctaccaacatg
tacaacaaagactcagctatagtaaatggagtttactggtctgaagccttgaataaagtt
tttgtggataacttcgagagggacccatccctcatatggcagtactttggcagtgccaag
ggcttcttcaggcagtacccagggatcaaatggagaccagatgaacatggagtcattgct
ttcgactgtcgcaaccgcaaatggtacatccaggcagccacatctcctaaggatgtagtg
atattggtggatgtgagtggcagtatgaagggcctgagactgaccatcgccagacagacc
gtctcttccatactggacacactgggggacgacgacttcttcaacgtcattgcttacaac
gacgaggtgcactatgtagagccatgcctgaatggaactctggtccaagctgacgtcacc
aacaaagaccatttccggatgaatctggataagctgttagctaaaggcatcggcatgctg
gacgtaggtctcactgaagccttcgaggtcctcaatgattttaaccagacaggtcgaggc
agtgtgtgtagtcaggccatcatgttggtgaccgatggggcagttgacacgtatgacgct
gtcttcgccaagtacaactggcccgacagaaaggtccggatattcccctacctgattggt
cgagagtcagccttcgcagataacctgaaatggatggcctgcgctaataaaggttacttc
actcagatctccactctggctgatgtacaggagaatgtgatggagtatttgcatgtgctc
agtcggcccaaagtcattgcccaagagcacgatacggtgtggaccgaggcctacattgac
agcaccctccctcaggctcaaaagttggaggatggtcagggtcctattttgatgaccact
gttgccatgcctgtgttcagcaccaagaatgagacgaggaataaaggcatcctgctaggc
gtggttggtactgatgttcctgtctctgagctcctcaaaaccatccccaaatataagctg
ggtatccatggttacgcatttgccataactaacaacgggtacattctgacccaccctgac
ctcagaccattgtatgaggagagtaagaaacgtaggaagcccaactacagcagtgtggat
ctgtctgaggtggaatgggaagacaaggacgacatactgcgaaatgccatggtaaacagg
aagactggcaccttctccatggaggtaaagaagactgtggacaaagggaagcgtgtgctg
gtactgcataatgattactactacactgacatcaagggaacccccttcagtctaggggta
gccctgtccagaggccatgggaaatatttcttcagaggaaacgtcactgtagaagaaggt
cttcatgatctggagcaccctgatgtagaactagcagatgaatggacatactgtgacaca
gatgagcacccagagcatcggtacctgtctcagatagaagccatcaaactctacctcagt
ggacgagaaccacaccttaaatgtgataaggaactgatccaggaggtgctgtttgatgcc
gtggtaacagctcctctagaggcctactggaccagcctggtactcaacaagtcagagaac
tctgataagggcgtggagatagcctacctgggcacacgtactggcctctccagaatcaac
ttgtttgtggttccagaccagctgaccaatcaagatttcctgacagctgaagataaagaa
ggggtgttcaacgccgatcactttcccctgtggtacaagagagcggcagaacaggttcct
ggaacctttgtctactctctccccttcaacacagggaaggagaataacagtgttgtgttg
gccagcactgccattcagctactggacgagagacaatcccccattgctgccgctgtgggg
atccagatgaagctggagttcttccaaaggaagttctggacagccagccgacagtgtgca
gcgttggatgggaaatgctctataagctgtgataatgagaacatcaactgttacctgata
gacaacaatggcttcatcctggtagcagaggactactctctgacagggatgttctttgga
gaagcagagggggcagtgatgaataaactgctcctcatgggttcctttaagagggttact
ttgtatgactaccaggcgatctgtaggatctttgcagagagtagtgacggttcccgcaca
ttactggacccctactttgccatatttgccacagtgaagtggctcctgacagaacttgtc
atttttatggtggagtttaacctgtacagctggtggtactctgacctcacagccaaagcc
cagaggggtgatcggaccatgttggtgccatgtgatactgagtacccagccttcgtctca
gagagaaccattaaggagaccactgggaacatcgactgtgagggatgcatcaaatccttt
gtgatccagcagatccccagcagtaatctcttcatggtggtggtagacaacaagtgtgac
tgttctgaggctgttccaatcaccatggaccccatcgagatcatgcataacgagtctctg
aagtgtgaacggctgaagttccaaaaggaccggagacgacctgactcctgccaccccttt
cacccagaggagaactctatggagtgtggaggagctctcaacctctccccatcgctaacg
gcaacactgctctgcttgctgctggcgctgtttcttaggtga
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