Coregonus clupeaformis (lake whitefish): 121546103
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Entry
121546103 CDS
T08357
Name
(RefSeq) DNA topoisomerase 1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cclu03032
]
121546103
Enzymes [BR:
cclu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
121546103
DNA replication proteins [BR:
cclu03032
]
Eukaryotic type
DNA Topoisomerases
121546103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
121546103
NCBI-ProteinID:
XP_041713059
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Position
30:complement(44670700..44702243)
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AA seq
912 aa
AA seq
DB search
MSGDHGERDSQVNSGSRANDSHKHKDKHKDKEHRHKEHKKDKEREKAKYSNSEHREHSEK
KHRDKEKEKERLKHSDGSVDRHREKQKEEERLKHSDGSVDRHREKQKEEERLKHSDGSVD
RHREKQKEEERLKHSDGSVDRHREKQKEEERLKHSDGSVDRHREKQKEEERLKHSDGSVD
RHREKQKEEERLKHSDGSVDRHREKQKEEERLKHSDGSVDRHREKQKEKDKEKRREEKVK
SSHVEGKPKKEKENGHAREMWSSPSPSPPAIKSEPEEDNGLYPSPKHNKTLKRERDEEEF
EYKPKKMKTENGKKAKKRKQEYEDEEEEEEIKPKKKAKDKKTKKEPEEKWKWWEEERSTD
GSKWKFLEHKGPVLAPPYEPLPGHVRFFYDGKPLRLSAPAEEVATFFAKMLDHEYTTKDM
FRKNFYKDWRKEMTSEEKSKITDINKCNFTEMSEYFKAQSEARKQMSKDEKLKIKEENER
ILQEYGFCVMDNHKERIGNFRIEPPGLFRGRGDHPKMGMLKRRIRPEDIIINCSKDSKHP
KPPQGTRWKEVRHDNKVTWLVSWTENIQGSIKYIMLNPSSRIKGEKDWQKYETARRLKKC
VDRLRAQYREDWKSKEMRIRQRAVALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHIK
LYPKMDDQEYVVEFDFLGKDSIRYYNKMPVEKRVFKNLQLFLENKQPEDDLFDRLNTSIL
NKHLQELMDGLTAKVFRTYNASITLQQQLKELTSPDESIPAKILSYNRANRAVAILCNHQ
RAPPKTFEKSMQNLQTKIDEKQKQLSTTRKQLKGAKTEHKASHDDRSKKMVEVKRKAVQR
IEEQLMKLQMQATDREENKQIALGTSKLNYLDPRISVAWVKKWDVPIEKIYNKTQREKFA
WAIDMAEEDYEF
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgagcggggatcacggtgaaagagactcgcaggtcaattctgggtctcgagccaatgac
tctcacaaacacaaggacaagcacaaagacaaagaacacaggcacaaagagcacaagaaa
gacaaggagagagagaaagccaagtacagcaacagtgaacacagggagcactctgaaaag
aagcacagagacaaagagaaggaaaaggagaggttgaagcacagcgacgggagtgtcgac
aggcacagggagaaacagaaggaggaggagaggttgaagcacagcgacgggagtgtcgac
aggcacagggagaaacagaaggaggaggagaggttgaagcacagcgacgggagtgtcgac
aggcacagggagaaacagaaggaggaggagaggttgaagcacagcgacgggagtgtcgac
aggcacagggagaaacagaaggaggaggagaggttgaagcacagcgacgggagtgtcgac
aggcacagggagaaacagaaggaggaggagaggttgaagcacagcgacgggagtgtcgac
aggcacagggagaaacagaaggaggaggagaggttgaagcacagcgacgggagtgtcgac
aggcacagggagaaacagaaggaggaggagaggttgaagcacagcgacgggagtgtcgac
aggcacagggagaaacagaaggagaaagacaaagagaagagaagagaggaaaaggtcaaa
tcctcccatgttgaaggaaagcccaagaaggagaaagaaaacggtcatgcaagggagatg
tggagcagccccagccccagccctcctgccattaagagtgaaccagaggaggacaacggc
ttgtacccctctcccaaacacaacaagactctgaagagagagagagatgaggaggaattt
gaatacaagcccaaaaagatgaagacagagaatggcaagaaggcaaagaagagaaaacag
gaatatgaagacgaggaggaggaagaggaaataaaacccaagaagaaggcgaaagacaag
aaaaccaagaaggaaccagaggagaagtggaaatggtgggaggaggagagatctactgac
ggctccaaatggaagtttctggaacacaagggacctgttcttgctcctccatacgaaccc
ctacccggccatgtcaggtttttctacgatggtaagcccctgagactaagtgcccctgca
gaggaggtggctacgttctttgctaagatgctggaccatgagtacacaaccaaggacatg
tttagaaagaacttctacaaggactggagaaaggaaatgacatcggaggagaagtcaaag
atcacagatataaataagtgtaacttcacagagatgagcgagtacttcaaggcccaatca
gaggcccggaaacagatgtccaaagacgagaaactgaaaatcaaagaggagaatgagcgt
atcctccaggagtatggcttctgtgtgatggacaaccataaggagcgaattggaaacttc
cgcatcgagcctcccggtctgttcagggggcgtggggaccacccaaagatgggcatgctg
aaacgccgcatccgccctgaagacatcattatcaactgcagcaaagattccaagcacccc
aagccgccccagggcacgcgctggaaggaggttcgtcatgacaacaaggtcacatggctg
gtgtcgtggactgagaacatccagggttctatcaagtacatcatgctcaaccccagctcc
agaatcaagggcgagaaggactggcagaagtatgagacggcccggaggctgaagaagtgt
gtggaccgcctgagggcgcagtacagagaggactggaagtctaaagagatgaggatcaga
cagagagctgtggctctctacttcatagacaagctggccctgagggcagggaatgagaag
gaggagggggagacggctgatacagttggctgctgctccctgagggtggaacacatcaag
ctgtaccccaagatggacgaccaggagtatgtggtggagtttgacttcctgggaaaagac
tccatcagatactacaacaagatgcctgtggagaagagggtgtttaagaacctgcagctg
ttcctagagaataagcagcctgaggacgacctcttcgacagactcaatacttctattctg
aataagcacctccaggagttgatggatgggctgacagccaaagtgttccgtacgtacaat
gcctccatcaccctgcagcagcagctcaaagagctcaccagcccggacgagagcattcct
gctaagatcctgtcctacaacagagccaaccgggcggtggctatactgtgcaaccaccag
agggctccacccaagacctttgagaagtccatgcagaacctgcaaaccaagatagatgag
aagcagaagcagctgtcgaccaccaggaaacagctgaagggggccaagacagagcacaag
gcttcacatgatgaccggagcaaaaagatggtggaggtgaagaggaaggcggtccagagg
atagaggaacagctgatgaagttacagatgcaggccacagacagagaggagaacaagcag
atcgccctgggaacctccaaactcaactacctggacccacgcatctctgtggcatgggtt
aagaaatgggacgttcccatagagaagatctacaataaaacccagagggagaaatttgcc
tgggccatcgacatggccgaagaagactatgagttttag
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