Coregonus clupeaformis (lake whitefish): 121546115
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Entry
121546115 CDS
T08357
Name
(RefSeq) TBC1 domain family member 22B-like isoform X1
KO
K20360
TBC1 domain family member 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121546115
Membrane trafficking [BR:
cclu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
121546115
Retrieval pathways
121546115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
121546115
NCBI-ProteinID:
XP_041713075
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All DBs
Position
30:complement(39760768..39773037)
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AA seq
526 aa
AA seq
DB search
MSPHAPSDAPGRLLLFVFYSIQPVYGAQHPPLDPRIHRTFPKDTPKGNNLKSKKASSFHE
FARSTNDAWDIDEEEDEDFLAPIHPSSLPPTLHSPHQVPPLPSQQPSDTTRELDTGPGPA
DQLAPPTAEVCLQQEENTDCGQINGRVVVKSSSEALLNTNTVSSTVRSTLQKQQSLPVRP
IIPLVARISDQNSSGAPIMTVRDKSRLDKFKYLLSCPNTDLEALRKHSWSGIPREVRPIT
WRLLSGYLPANMERRDLVLMRKRDEYFGFIEQYYHSRTDETYKDTYRQIHIDIPRTNPLI
PLFQQPTVQEVFERILFIWAIRHPASGYVQGINDLVTPFFVVFLSEFVEEDVENFDVASL
PLDTQRNIEADSFWCMTKLLDGIQDNYTFAQPGIQNKVKALEELVSRIDEDIHNYFKRYE
VEYLQFAFRWMNNLLMRELPLRCTIRLWDTYQAEQEGFSHFHLYVCAAFLIEWRKEILSM
VDFQGLLMLLQNLPTIHWGNEEVGLLLAEAYRLKYMFADAPNHYKR
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgagcccacatgctcccagtgacgcaccaggtaggctactgctctttgtcttctacagt
atacagccagtttatggagcgcagcatcctccactcgaccccagaatacaccgcacgttt
cctaaagacactcctaagggaaacaatctcaagtctaaaaaggcgtctagtttccacgaa
tttgcccgtagcaccaacgatgcctgggacattgatgaggaggaggatgaggacttctta
gctcccattcacccttcatctctcccgcccaccctgcactccccgcaccaggtgcctcct
cttccttcacaacaacccagtgacaccaccagggagctagacacagggccagggcctgca
gaccagctggctcccccaacagcagaggtctgtcttcagcaggaggagaacacagactgt
ggacagatcaatggcagagtggtggtgaagtccagcagtgaggccctgctcaataccaat
acagtttcctccacagtgcgctccaccctgcagaagcaacagtctctcccagttcgtcct
atcatcccgttagtcgccagaatctctgaccaaaactcctcgggggccccaatcatgaca
gtgcgagacaagagccgattggacaaattcaaataccttctgtcctgtcctaacaccgac
ctcgaggcgctccggaagcacagctggtcaggcattccacgagaagtgaggcccatcaca
tggaggctcctctctggttacctcccagccaacatggagcgcagagatctggtgctgatg
aggaagagagatgagtactttggcttcattgaacagtattaccactccaggacagacgag
acttacaaagacacatatagacagatccacattgatattccgaggacaaacccgctaatt
ccactcttccagcagcccacggtgcaagaggtgtttgaacggatcctcttcatctgggct
atccgccatccagccagtggctatgtccagggaatcaacgacttggtcactccattcttt
gtggtcttcctctccgaatttgtggaggaggatgtggagaattttgacgtagcgtccctg
cctcttgacacccagaggaacattgaggcagacagcttctggtgcatgaccaagctgctg
gatggaatacaggacaactacacctttgctcagccagggattcagaacaaagtgaaagct
ttggaagaattggttagcagaatcgatgaggacatacacaactactttaagaggtatgag
gtggagtacctgcagtttgctttccgctggatgaacaacctgctgatgagagaactgcct
ctgcgctgcaccatccgcctctgggacacctatcaggctgagcaagagggcttctcccac
ttccacctgtacgtctgtgctgctttcctgatcgagtggcgcaaagagatcctctcaatg
gtcgattttcagggtcttctcatgttactccaaaaccttcccacaatccactgggggaac
gaggaagtgggccttctcctggctgaagcatacagactcaagtacatgtttgctgatgcg
cccaatcactacaagagatag
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