Coregonus clupeaformis (lake whitefish): 121546140
Help
Entry
121546140 CDS
T08357
Name
(RefSeq) sortilin
KO
K12388
sortilin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121546140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
DUF7859
Motif
Other DBs
NCBI-GeneID:
121546140
NCBI-ProteinID:
XP_045065496
LinkDB
All DBs
Position
30:complement(37921212..37973355)
Genome browser
AA seq
821 aa
AA seq
DB search
MGVLAHCVFIFIFQHLTSAYDFKEGLYNNGQYEFVKDPSLNIEKRSPDLDLEQFDSESSD
HIRTRRSADQGDCKSLQGFDTKLTNNTQTYSFDDLSGSVSLAWVGDATGVILALTTFQVP
FFMLRFGQSKLYRSENYGKSFQDVTNLINNTFIRTEFGIAIGPENSGKVILTGDVSGSLG
SRIFLSRDFGNSFEQQDLPFNPLMQIIYNPRDANVLLVISNTNELWLSEDFGENWRKIHD
MVCLAKWGMESNLFFTTNLNGSCNERGMLDLRKTTDYGKTIKTVAIKIFSFGLGGKFLFA
SVMTGTGTLRMIHVSTNQGEEWNMAQLPPVGHEEFYSILAANEDMVFMHVDEPGDTGFGS
IYVSDDRGTVYSKSLERHLYTTTGGDTDFTNVTSLRGVFITSILAEDGSVQSVVSFDQGG
EWVPLQKPDNTKCDSTAKDPDKCSLHIHAAYSTAMKLNVPMLPLSEPNAVGLIMAHGSVG
DAISVMKPDVFVSDDGGYTWLQALKGPHHYAILDSGGLLVAVEHSAQPIKDIKFSTDEGQ
CWHVHQFTSDPIHFTGLASEPGARSMNVSVWGYRDALLSQYWVSVTIDFRELLTRDCEDQ
DYVQWLAHSDDISDPNDGCMLGYKEKFLRLRKASVCWNGRDYEVNKQPTPCPCTLDDFQC
DFGYYRKENSPECVEQPDLKGHVLEFCLQGKKELLQTRGYRKIPGDKCEGGTQPERKEID
LSIRCVSDLLGPQDLLTDGHLSSSAPIVVTVLIILLLCIVAGVLFVKKYVCGGRFLVHRY
SVLQQHAEAQGDGVDESLDSNHTQAGNKTGCHDDSDEDLLE
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgggagttctggcgcactgtgtttttatttttatattccagcatttgacgtccgcttat
gattttaaagaaggactatataacaacggacagtatgaatttgtgaaagatcccagtttg
aatatcgaaaagagatcaccggatttagatttagaacagtttgactctgaatcatctgac
cacattaggaccaggagaagtgcggatcaaggggactgtaaaagtctccagggattcgac
accaagttgactaacaacacccaaacctattccttcgacgacctgagtgggtccgtgtca
ctggcctgggtcggagacgccaccggggtcattctggctctgacaacattccaggtgccg
ttcttcatgttgagattcggtcagtctaaactctatcgaagtgagaactatgggaagtcg
ttccaggacgtcacaaacctcatcaacaacactttcatcaggacagagttcggcatcgcc
atcggaccagagaactctgggaaggtgatcctgacaggtgatgtgtctggcagcctgggc
tctcgtatctttctctccagagactttgggaacagctttgagcagcaggaccttcccttc
aaccccctgatgcagatcatatacaaccccagagacgccaatgttctcctggtcatcagc
aacactaatgaactctggctgtctgaggactttggagagaactggaggaagatccatgac
atggtgtgtctggccaaatgggggatggaaagtaacctattcttcaccaccaacctcaat
ggatcatgcaatgaaaggggaatgctggacttgaggaagacaacagactatgggaagacc
atcaagactgttgccattaagatcttctcctttggcctgggcggaaagttcctgtttgct
tctgttatgactggtactggcactctgaggatgatccatgtgtcgactaaccagggggag
gagtggaacatggctcaactgcctccggttggccacgaggagttctattctatcttggca
gccaatgaggacatggtgtttatgcacgtggatgaaccaggagacacaggctttggcagc
atctacgtgtcagatgacagggggacagtgtattccaagtctctggagcgtcacctctac
accaccacagggggcgacactgacttcaccaacgttacctctctacgaggagtcttcatc
accagtatactggcagaggacggctcggtgcagtccgtggtgtccttcgaccagggaggg
gaatgggtgcccctgcagaagcctgacaacaccaagtgtgactccacagctaaagaccct
gacaagtgcagtctccacatccacgcagcttacagcacggctatgaagctgaacgtcccc
atgctgcctctcagtgaaccaaacgctgtaggactcatcatggctcacgggagtgtgggt
gatgccatctctgtgatgaagcctgacgtattcgtgtccgatgacgggggctacacctgg
ctccaggccctgaagggacctcaccactatgccatcctggactctggtggactactggtg
gctgtggagcactctgctcagcccatcaaagacatcaagttttccacagacgagggccag
tgctggcatgttcaccagttcactagcgacccaatccacttcacagggctagcgtcggag
ccgggggcgaggtctatgaacgtcagtgtctggggctacagagacgctctgctcagtcag
tactgggtatccgtcaccatcgacttcagagagctgctcactagagactgtgaggaccag
gactacgtgcagtggctggcgcactctgatgacatcagcgaccctaacgacggctgtatg
ttgggttataaggagaagttcctgcgtctgaggaaggcctccgtctgctggaacggacgg
gactatgaggtcaacaagcaacccaccccctgcccctgcaccctggatgacttccaatgt
gactttgggtactatcgtaaagagaacagccccgagtgtgtggagcagccggacctgaag
ggccacgttctggagttctgtctgcagggcaagaaggagttactgcagaccagaggctat
aggaagatccctggggataagtgtgagggaggaactcagccggagaggaaagagatcgac
ctcagtattaggtgtgtcagtgacctgctgggaccgcaggatctactgacggatggccat
ctgtccagctctgcacccatcgtagtgacggttctaatcattttgctactctgtatcgta
gctggggtcctcttcgtcaagaagtacgtctgcggtggaaggttcctggtacacaggtac
tcagtcctacagcagcatgctgaggcccagggagacggagtagacgagtcactagatagc
aaccacactcaggctggcaacaagaccggctgccacgacgattcagacgaggatcttctg
gagtaa
DBGET
integrated database retrieval system
