Coregonus clupeaformis (lake whitefish): 121546170
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Entry
121546170 CDS
T08357
Name
(RefSeq) IQ motif and SEC7 domain-containing protein 1-like
KO
K12495
IQ motif and SEC7 domain-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121546170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121546170
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121546170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
IQ_SEC7_PH
SOS1_NGEF_PH
PH_19
RHG20_PH
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
121546170
NCBI-ProteinID:
XP_041713167
LinkDB
All DBs
Position
30:complement(41354799..41404562)
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AA seq
1295 aa
AA seq
DB search
MLERKYGGYFLSRRAARTIQTAFRQYRMNKNFEQLRSSASESRVTRRMILPNMRLQYSFD
ERPGQPQGQGVQQGQRYQHPGGQPGDEEMEAGSPPRCQGAREEDTHLDETFSKQVKSLAD
SIDDALTCQSGVEDFQEEEEEEEEEEEGDGGETGVEADDFEECVWRPREGERQRGGGRGG
VGGRGGGERQSMHEDSTATFYSDVTLYMDDGLPSSPQSLDRAPSSTDTEYWSPGVCGGGV
GGREDSRDTAGGGSSNSRRSTPCTECRDYSLRGSHLPLLTIEPPSDSSVDMSDRSDRGSI
GRLVYETEPGGGGGGGSPQGTIKHNPHPNPHPNPNGRALPYHPLHHHPYPDTPTSSSQSP
QGPPLTPLSSSSSATLPPGGLEQVCCSDGDNDSLSSTTNSNDTINCSSGSSSRDSLREPL
PPLGKQTYQKESRHSWDSPAFNNDVVQRRQYRIGLNLFNKKPEKGIQYLIERGFVSDTPV
GIARFILERKGLSRQMIGEFLGCRQKQFNKDVLDCVVDELDFSGMDLDDALRKFQAQIKV
QGEAQKVERLIETFSQRYCVCNPVLIQQFQNPDTIFILAFAIILLNTDMYSPNVKPERKM
KLEDFIKNLRGVDNGQDIPRDLLVGIYHRIEKWELRTNDDHVSQVQAVERVLVGKKPVLS
LPHRRLVCCCQLYEVPDPNRSQRTGVHQREVFLFNDLLVVTKIFQKKKTSVTYSFRQSFP
LVEMQVHMFQNQYYPHGARLTSANPGGERKVLIVFNAPSQQDRTRFTSDLRESIAEVQEM
EKYRVESELEKQKGVMRQVVDGSGGVGPSCGVKAVNGTLGRPSLDDSYVSADGLKRTALS
SSLRDLADTGKRGRRNSAGSLDSTLEGSIISSPRPHQRPHMAEGIMPPGYYRPHHPILSP
GTGVGGGPGLNHHTATGTTALGPSSGDRRGTGSQGSGSGGGGGSGGSFLGSLFGSKRSST
KPPGPLTPLLPPGLPHYPAPVPPPTTGGPPPHSPSALSHSDPGGPSKIQALHAQYCHNSI
AGQQPPPPYHHHHHYHAQTGPAPSQPSSTAQGAPGPHTIHRGPMVGDPKRPGPGPVPSHP
QLQQLSEPLLAQLQPHGVQGQGGRYTIMGGSMGVGCPAPPLSPHSPLSPVPPALYHTHGR
GGGGGGGGGGAKLPLTLSRSQPHPHAHTHVPHLTAHSHNHSPHPGLSPSPLTAQHPQHQT
HFIFGTPPPQTPTARHIPQAAAHSHTQYLPLSSIPPPPLHSPLPPPLSPYTHPLQQQPGQ
PPQLQGSGGGSASSTGTGSTGSSKSKPINRISTVV
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgctggagaggaagtatggcggttacttcctcagtcggcgggcggcacgcaccatccag
acggcgttccgtcagtaccgcatgaacaagaacttcgagcagctacgaagctctgcctct
gagagccgggtgactcgacgtatgatcctgcctaacatgagactgcagtactcgtttgac
gagcggccaggccagccccaaggccagggggttcaacagggacagaggtatcagcaccct
ggaggccagcctggggatgaagagatggaggctgggtctcctccacgctgccagggggcc
agagaggaggacacacacctggacgagaccttctccaaacaggtcaagtccctggctgac
tccatcgatgacgccctgacctgtcagtctggtgtggaagactttcaggaggaggaggag
gaagaggaagaggaggaggaaggtgacggaggcgagacaggggtggaggcagacgacttt
gaagagtgtgtttggagaccgagggagggagaaagacagaggggcggaggaagaggagga
gtgggaggaagaggaggaggagagagacagagcatgcacgaggacagcacagccaccttc
tacagcgacgtgaccctctacatggatgacgggctcccttcttcgccccagtccctggac
cgggcccccagcagcaccgacacagagtactggagccctggagtctgtggcggcggagta
ggggggcgcgaggacagccgggacacagcgggagggggcagcagtaacagccgacgcagc
accccctgtactgagtgtagagactacagcctgagaggatctcacctgcccctgctgacc
attgaacccccaagcgacagctctgttgatatgagtgaccgctcggaccgtggctctata
ggcagactggtctacgagacagaaccagggggaggtggtggaggagggtcgcctcagggc
actattaaacacaacccccacccaaatcctcaccccaaccccaacgggcgagctctccca
tatcaccctctacaccaccacccgtaccccgacacccctacctcctcctctcagtccccc
cagggaccacccctcaccccgctatcttcctcctcatctgccacactgccccctggtggc
ctggagcaggtctgctgttctgacggagacaacgactctctcagctccaccaccaactct
aacgataccatcaactgctcctccgggtcctcgtcacgtgacagcctccgcgagcccctc
ccaccgctcggaaaacagacctatcagaaagagagcaggcacagctgggatagccccgcc
tttaacaatgacgtggtgcagagacgacagtaccgcatcggactcaatctgttcaacaag
aagccagagaagggtatccagtacctgatagagagaggcttcgtatcggacacaccagta
ggcatcgcccgcttcatcctggagaggaaaggactgagcagacagatgataggggagttc
ctgggctgcagacagaaacagttcaacaaggacgtactggattgtgtggtggatgagttg
gacttctcagggatggatctggatgatgccctcaggaagttccaggcccagatcaaagtc
cagggggaggcccagaaggtagagagactgatagagactttcagtcagcggtactgtgtg
tgtaacccggtgctgatacaacagttccagaaccccgacaccatcttcatcctggccttc
gccatcatcctcctcaacacagacatgtactctcccaacgtcaaaccagagaggaagatg
aagctggaggacttcatcaaaaacctcagaggagttgacaacggtcaggacattcccaga
gacctgttagtagggatctaccatcgcatagagaaatgggagctacgcaccaacgatgac
cacgtctcacaagtacaggctgtggagagggttttggtcggcaagaagcctgtgctttcg
ctgccccaccgcaggttggtgtgttgctgtcagctgtacgaggtgcctgaccctaacaga
agccagaggactggagtccaccagagagaagtcttcctcttcaacgacctgctcgtagta
accaagatcttccagaagaagaagacctctgtgacatacagtttcagacagtccttccca
ctagtcgaaatgcaggtccacatgttccagaaccagtactacccccatggtgcccgtctg
acgtcagccaaccctggcggggaaagaaaggttctgattgtgtttaatgctccgagccag
caggacagaacacgcttcacctccgacttgagagagagcatcgctgaggtgcaggagatg
gagaaatacagagttgagtcggagttggagaagcagaaaggagtgatgaggcaagttgtg
gacgggtctggcggtgttggtcctagctgcggcgtgaaggcggtgaacggcactctgggt
aggcccagtctggacgacagctatgtctctgcagacggactaaaacgtaccgcgctcagc
tcatcactgagagacctagcagacacaggaaagcggggccgccggaacagtgctggctcc
ctggacagtactctggaaggctccatcattagcagtccccggcctcaccagcgcccccac
atggctgaaggtataatgccacccggctactaccggcctcatcaccccatcctgagcccc
gggacgggggtggggggtgggccggggctaaatcaccacaccgctactgggacgacggca
ctgggtcccagcagtggagaccgaagggggactggatcccaggggagcgggtctggaggg
ggagggggcagtggaggatccttcctgggttccctgttcgggagcaagcgctccagcacc
aagccccctggtcctctcacccctctcctcccacctgggctgccacactaccctgcacct
gtccccccgcccaccactggcggcccgcccccacactccccctccgccctcagccactcc
gacccaggagggccctccaagatccaggccctgcacgcccagtactgccacaacagtatc
gcggggcagcagcctcctccaccctaccaccaccaccaccactaccacgcccagacaggg
cccgctcccagccagccctcctccaccgcccagggggcccctgggcctcataccatccac
aggggccccatggtgggggaccccaagcggccgggccccggtcccgttccctcccacccc
cagctccagcagctctccgagcctctgctggcccagctgcagccgcatggtgtacagggt
cagggggggcgctataccatcatggggggttctatgggggtaggatgccccgctccgccc
ctttctccacattcccctctctccccggtgcccccagccctctaccacacacacggtcgg
ggaggaggaggaggaggaggaggaggaggcgccaagctccctcttactctctcgcgctcg
cagccccaccctcacgcccacacccacgtccctcatcttaccgctcattcccacaaccac
agcccccaccccggcctgtcccccagccctcttaccgcccagcaccctcagcaccagact
cactttatctttggcaccccgcccccacagacccctaccgcccgtcacatcccgcaggcc
gccgcccacagccacacccagtacctcccgctctcctccataccccctccccctctgcac
tcccctttacccccccctctctccccctacacccaccccctccagcagcagcccggccag
ccgccccagctccaggggtctggcgggggcagcgccagcagcacgggcacggggagcacc
ggcagctccaagtccaagcctatcaaccgcatcagcacggtggtgtga
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