Coregonus clupeaformis (lake whitefish): 121546176 Help Entry 121546176         CDS       T08357                                  Name (RefSeq) host cell factor 1 isoform X1   KO K14966   host cell factor 1 Organism cclu  Coregonus clupeaformis (lake whitefish) Pathway cclu03083   Polycomb repressive complex cclu04980   Cobalamin transport and metabolism cclu05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:cclu00001]  09120 Genetic Information Processing   09126 Chromosome    03083 Polycomb repressive complex     121546176  09150 Organismal Systems   09154 Digestive system    04980 Cobalamin transport and metabolism     121546176  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     121546176  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:cclu01009]     121546176   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:cclu03036]     121546176    03029 Mitochondrial biogenesis [BR:cclu03029]     121546176 Protein phosphatases and associated proteins [BR:cclu01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      121546176 Chromosome and associated proteins [BR:cclu03036]  Eukaryotic type   Histone modification proteins    HAT complexes     NSL complex      121546176    HMT complexes     COMPASS/SET1 complex      121546176     MLL-HCF complex      121546176    Polycomb repressive complex (PRC) and associated proteins     PR-DUB complex      121546176 Mitochondrial biogenesis [BR:cclu03029]  Mitochondrial quality control factors   Regulator of mitochondrial biogenesis    Other regulator of mitochondrial biogenesis     121546176 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Kelch_5 Kelch_3 Kelch_4 Kelch_1 Kelch_6 fn3 Motif Other DBs NCBI-GeneID:  121546176 NCBI-ProteinID:  XP_041713177 LinkDB All DBs Position 30:complement(41973220..42041932) Genome browser AA seq 1819 aa AA seqDB search MASCSVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTATNQ WFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKRLKAKSP KNGPPPCPRLGHSFSLVGNKCFLFGGLANDSEDPKNNIPRYLNDLYTLELRAGSSVVGWD IPVTYGVLPPPRESHTAVVYTEKTSKKSRLVIYGGMSGCRLGDLWILDIDTLTWNKPSIN GTPPLPRSLHSATTVTNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDSMVWES VLMDSVEDNMPRARAGHCSVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYLETEKPRPPS RVQLVRANTSSLEVSWGEVPTADTFLLQLQKYDIPPATAASSPGVSPPSSLPVGSSPKSP VTASAMSVHGHPPQGIALVPSPTTSMPGSPLAARGPAILKVSAPHSTTGTSIVTVRQANQ GGKSPVMVTSLPAGVRMVVPAQVAQGTPMGSSPQMSGMAALAAAAAATQKIPPSTATMQL PAGATIVKTVAMSPGSQTVKAASPVMISNPATRMLKTAAAQVGTSGVATPGTPNRPIITV HKSGTVTVAQQHQVVTTVVGGVTKTITLVKSPLTLGGGGTLLTAANQGQNKLMSGKDVQH WLSNLSNLGKVMSVVQTKPGQTGALTGHAGSSLQHILQTKGPLPAGTILKLVTSADGKPT TIITTSKAGGTVGGKPTILSYSGVPTSKPGTHIIKTIPMSTVGQTGVTGSGMKSPITIIT TKMMTPGTGTPGKIISAMPRAGAGQQGLTQVVLKGAPGQPGTILRTVPMGGVRLVSPVTV SGVKPNVTTLVVKGTTGVTTLGTVTGTVSTSLAGGSVASATPITTLGTRTTLPGQVTVSA AQAGGQATQVTLITTPSGVEAQPVHDLPVSIMSSPTSADPSSTVTLVCSNPPCETHETGT TNTATTASANMTGNGGVERVCSNPPCETHDTGTTNTQTTASSNMGQVQQLCTNPPSETHD TGTTNTPTTASCNMGSDKQQQGSCITNPSGSDPPSSPAPSSSGALSPSSVSGAVSAPGVL RPETLRTGTTYTSTTARSNMGSDKMGMSLGSSSSDSQSKSSSGCGGGSPLTSPVCSSPRY ETHQTDTTTTSTQANSSMGSGQTTGTVQRVCSNPPCETHETGKTNTPSQATSNLAGTGTG TGTVQRVCSNPPCETHETGTTNTPSQATSNLAGTGTGTGTVQRVCSNPPCETHETGTTNT ATTATAQPGDSTQGDNGTTEAPSSSSATTESNAVTTSGRAFTMVTQSTPTPGPSVPEISS MSGLSEAVASGAEEEEEAMQTDSLPEGTIRVVTLEEAAAAGIQVHVEGMEEQNQGEQEGL PAELMSEGGAGGQQTLMVTGLTPEELAVTAAAEEAAQHAATGEANAQAMAIQAVLQAAQH TVMNQTTTIPIVLTQAELAALVQQQQQLQQAQAQAQAQAQAQAQAAAAQHIQAQAAAAQH NQPTEGLAPADSLNDPASESSGQELAAAVTQAVARLAPSCTLTPTQAMMVASPAKTQAAT SEREVVNGIESAAGRQGAPPAVAKAPVKKDNQWFDVGIVKVTNTVVTHYYLPSEDQAAVD DDSGAIPDYSQMRKMDLQPGTAYKFRVAGINACGRGNFSEVSAFKTCLPGFPGAPCAIKI SKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSTQSGEQAKPTTTTTPAQLAFMRVFCGPN PSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQEMSKDGLAAKPSAKR PGSSPDMKAAGPKKARSDQ NT seq 5460 nt NT seq  +upstreamnt  +downstreamnt atggcatcttgctcagtcctgcagccacggtggaagcgggttttgggttggtccggtcct gtccctcggccccgacacgggcaccgtgcggttgcaatcaaagaattaatggtcgttttc ggggggggcaatgaaggaattgtggatgagttgcacgtttataacacagcgaccaaccag tggttcattcctgctgtccgtggtgatatcccgcctggctgtgctgcgtatgggtttgtg tgtgatggcaccaggctgctggtgttcggggggatggtggagtatggtaaatacagcaac gatctgtatgaactgcaggccagccgctgggagtggaagcgtctgaaggccaagtctcct aagaacggcccccctccctgcccccgtctgggccacagcttctctctggtagggaacaaa tgcttcctgttcggaggactggctaacgacagcgaggaccccaagaacaacatccccaga tacctgaatgatctgtatacgttggagctgcgtgccggctccagtgtggtgggctgggac atccccgtcacctacggggtgctgcccccgcccagagagagccacactgccgtggtctac acagagaagacctccaagaagtcacgtcttgtcatctatggaggcatgagcggctgtcgt ctgggggatctgtggatcttagacatagacaccctgacgtggaataagccttctatcaac ggaacacctcctctccctcgcagtctccactctgctacaaccgtcaccaacaagatgtat gtgttcggaggctgggttcccctggtgatggatgacgtcaaagtagcgacacacgaaaag gagtggaagtgcaccaacacgctggcctgtctcaacctagactcgatggtgtgggagtcg gttctgatggactctgtagaggataacatgcctagagcccgggccggacactgctccgtt gccatcaactcacgcctctacgtctggagtggacgggacgggtaccgtaaggcctggaac aaccaggtgtgctgcaaggacctctggtacctggagacagagaagccccgccccccgtca cgggtgcagttggtgagagccaacaccagcagcctggaggtgagctggggggaagtacct actgcagacaccttcctgctgcaactgcagaagtacgatatcccccccgccacggctgcc tcttcccccggcgtcagccccccgtcgtcactaccggtcggttcctcccccaagagcccc gtcacagcctcggccatgtccgtccatggccaccctccccagggcatcgccctggtcccc tcccctaccacctccatgcctgggagtccactggctgcacgcggaccagctattcttaag gtgtctgctccccactccaccacaggcacctccatcgtcacggtgagacaggccaaccag ggcgggaaatcccctgtcatggttacatcacttcctgccggggttcgcatggtggtgccg gcccaggtcgcacagggaactccaatgggcagcagccctcagatgagtggcatggctgcg ctggctgcagctgctgcggccacccagaagatcccgccctccacggccaccatgcagctg ccagctggtgccaccatcgtcaagacggtggccatgagccctggctcccagactgtcaaa gctgcttcgcctgtcatgattagtaacccagccacccgcatgctgaagactgctgcggct caggtgggcacgtcaggtgtcgccacacccggaacgccaaatcggccaatcatcaccgtg cacaagtctggcacggtgacagttgcccagcaacaccaggtggttaccacggtagtggga ggagtcaccaagaccatcactcttgtcaagagtcccctcactcttgggggaggcggcacg ctgctgactgcggccaaccagggtcaaaacaaactgatgtctggcaaggacgttcagcat tggctgtccaacctgtccaacctggggaaggtgatgtcagtggtccagacgaaacctggt cagaccggagcgctgacgggccatgctggctccagcctgcagcacatcctacagacgaag ggtcctctcccggcaggtactatcctgaagctggtgacatcagccgacggcaagcccacc accatcatcaccacttccaaggccgggggcaccgtggggggcaagcccactatcctgtcc tacagcggcgtgcccacctccaagccgggcacacacatcatcaagaccatacccatgtcc accgtcggacaaacaggagtgactggcagtggtatgaagtcccccattaccatcatcacc actaagatgatgacaccaggcaccgggactccaggcaagatcatcagcgctatgcccaga gctggggctggccagcagggactcacacaggtggtgctgaagggtgcccccggacagccc gggactattttacggaccgtccccatgggaggtgtacgtctcgtctccccggtaactgtt tccggtgtcaaacctaacgtcaccaccctggtcgtcaagggaaccacaggtgtgactacg ttgggtacagtgactggcacagtgtcgaccagcctggcaggaggaagtgttgccagcgct actcccatcaccaccttgggcaccaggacgaccctgcctggacaggtcactgtctccgca gcacaggcaggaggccaggccacccaggtgaccttgatcacgacccccagcggcgtggag gctcagcctgtccatgaccttcctgtctccatcatgtcctcccccacctccgctgacccc tcctccacggtgaccctggtctgctctaaccccccctgcgagacccacgagaccggcacc accaacacggctaccacggcctccgctaacatgaccggtaatggtggggtggagagggtg tgttcaaacccgccgtgtgaaacccacgataccggcaccaccaatactcaaacgacggcg tcctccaacatgggccaggtacagcagctgtgcaccaaccccccgtcagagacccacgat acaggcactaccaacaccccgaccactgccagctgtaacatggggtccgacaagcaacag caaggttcctgcataactaaccccagtgggtctgatcctccgtcctctccggccccctcc tcctccggagccctctccccctcgtctgtctccggggccgtgtctgcgccgggggtgctg cgaccggagaccctgagaacagggaccacctacacctccaccaccgcccgctctaacatg ggctctgataagatggggatgagtctcggctcctcgtcctccgacagccagagcaaatcg tccagcggttgtggaggagggtcccccctcacctctcctgtgtgctccagtccacgctat gaaacacaccagacagacaccaccactacctcgacgcaggccaactccagtatgggcagt ggacagactacagggacagtgcagagggtgtgttccaatcctccgtgtgaaacgcatgag acggggaagaccaacaccccgtctcaggctacgtccaacctggcgggaacagggacagga acgggcacggtccagagggtgtgttccaatcctccgtgtgaaacgcatgagacagggacg accaacaccccgtctcaggctacgtccaacctggcgggaacagggacaggaacgggcacg gtccagagggtgtgttccaatcctccgtgtgaaacgcatgagacggggacgaccaacacg gccactactgccacagcccagcctggtgactcgacacagggagacaacggaactacggag gctccctcgtcgtcctcggcaactaccgagtccaacgctgtgacgacgtctggcagagcc ttcaccatggttactcagtccacgcccacacctgggccctccgtacctgagatctcatca atgtctgggttgtctgaggcggtggcatcgggggctgaagaggaagaggaggccatgcag actgactctctcccagagggcacaataagggttgtgaccctggaggaggctgctgcagct gggatacaggtccatgtggagggcatggaggaacagaaccagggggagcaggagggcctg cctgcagagctgatgtctgaaggtggcgctgggggccagcagaccctgatggtgacgggt ttaacccccgaggagctggctgttaccgctgcagccgaggaggcagcacaacacgctgct actggggaggctaacgcccaggccatggccatacaggctgtcctgcaggccgcacagcac actgtcatgaatcagaccaccaccatccccattgtgttgactcaggctgagctggcagcc ctggttcaacagcaacaacagctgcagcaggctcaggcccaggcccaggcccaggcccag gcccaggcccaggcagcggcagctcaacacatccaggcccaggcagcagcagcacaacac aaccagcccaccgagggcctggccccagcagacagcctgaacgacccagcgtcggagagc agcggccaggagctggccgctgcagtgacccaggctgtggcccgcttagccccgtcctgc accttgaccccaactcaggcaatgatggtggccagcccggctaagacgcaggcagctacg tccgagagagaggtggtcaatggaatagagtctgctgctgggaggcaaggagctcctcct gcggtggccaaagccccggtgaagaaagacaaccagtggtttgacgttggcatcgtcaag gttaccaacacggtggtcacacactactacctaccctctgaagaccaggccgccgtcgac gatgactctggggcgatcccagactacagtcagatgaggaagatggacctccagccaggg acggcctataagttcagagtggccgggatcaacgcctgtggccgggggaacttctcagag gtctcggccttcaagacctgtctaccaggcttccccggagctccctgtgctatcaagatc agcaagagcccagacggagcccacctgacctgggagcctccgtcggtaacgtctggtaag atcattgagtactccgtgtacctggccatccagagcacccagagcggagagcaggccaag cccaccaccaccaccaccccagcccagctggccttcatgcgggtgttctgtgggccaaac ccctcctgcctggtgcagtcgtccagcctctccaacgcacacatagactacaccaccaag cctgccatcatcttccgcatcgcagcccgcaacgagaagggttacggccctgccacccag gtcaggtggctccaagagatgagtaaagatggccttgcagctaaaccgtctgccaagaga ccaggctcctcacctgacatgaaagctgctggtccaaagaaggccagatcagaccagtaa

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