Coregonus clupeaformis (lake whitefish): 121546181
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Entry
121546181 CDS
T08357
Name
(RefSeq) transcription factor E3-like isoform X1
KO
K09105
transcription factor E3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04137
Mitophagy - animal
cclu04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
121546181
04137 Mitophagy - animal
121546181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121546181
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
121546181
SSDB
Ortholog
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Motif
Pfam:
MITF_TFEB_C_3_N
DUF3371
HLH
bHLH_IRO3
Vezatin
Motif
Other DBs
NCBI-GeneID:
121546181
NCBI-ProteinID:
XP_045065513
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Position
30
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AA seq
569 aa
AA seq
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MSTFNQGQNSEETGTFDSYQNHILLQRAPHEQPQTVFVILDTAETLNLISVEPLLPESGI
VADIEVESVLPSESDTFYQLKSQPITLSVSQPPSDTASPSSGPVMTSRVLMRQELMRQQA
RDQERREAQQQVSSAQLRTADSSPAISMAPAHAGARPPPAQVPVEVLKVQTHLENPTKYH
IQASQRQQVKHYLSSTLGNKLTNQTLGASPSPQSGSAPSLQPAASSTPSSPLAVLSLSAN
KEEMEDVIDDIISLESSLNDEFFTLIDSGLHLANTLPVSGNMLDVYSSGGMVAPTIAVSN
SCPADLHNVKTELTGTEVEVKAMTKERQKKDNHNQIERRRRFNINDRIKELGALIPKSSD
PPPCYGDRETRWNKGTILKASVDYIRRLQKEQQRAKEMETRQRKLEHSNRNLLLRIQELE
LQARLHGLSTPASSSQGSSSSHLSLSQSLDPSTGDALSRTLLSLSGGPGLQAASPSFLSP
PPSASPVGLMTMASPLDLDSLSFSELDDPSAAAFHASLLPDMGLGDILMDDRGVGMSSVG
GRDPLLSSVSPGASKTSSRRSSFSMEEDL
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgtctacctttaaccaggggcagaacagcgaggaaacgggaacatttgattcatatcaa
aatcacattctgttacagcgagcgcctcacgagcaaccgcagactgtgttcgtcattcta
gacacggccgaaactctgaatttgattagtgtggagcctctcctgcctgagtcggggata
gtagcagatatcgaggtggagagcgtcctcccgtcagagtctgataccttctaccagctg
aagagccagcccatcaccctgagcgtgtcccagcccccatctgacacggcgtctccctcc
tccggcccagtgatgacgtcccgggtgttgatgaggcaggagctgatgcgccagcaggcc
agggaccaggagaggagagaggcccagcagcaggtctcctcagcccagctacgcaccgcc
gactcctccccagccatctccatggccccagcgcacgccggggccagacctccccctgct
caggtccctgtggaggtcctcaaggttcagacccacctggagaaccccactaagtaccac
atccaggcctctcagagacagcaggtgaaacactacctctcctccaccctggggaacaaa
ctgaccaatcagacactgggcgcctccccctcgcctcagtccggatccgccccttctctc
cagcctgcagccagcagcactcccagcagcccactggctgtgctcagcctgagcgccaac
aaggaggagatggaagatgtgatcgatgacatcatcagtcttgaatccagtctcaacgat
gagttctttacgttgatcgactctggcctacatctagccaacacgctgccagtgtcaggg
aacatgctggatgtgtacagcagtggagggatggttgctcctaccatcgccgtctcaaac
tcctgtcctgctgacctgcacaacgtcaagactgagttaaccggtactgaggtggaggtt
aaagctatgacgaaggagcgacagaaaaaggacaaccataaccagattgagagacggagg
aggttcaacatcaacgatcgcatcaaggaactgggagctctcatccccaaatcgagtgac
ccacccccctgctacggagacagggagacgcgttggaacaagggaaccatcctgaaggcg
tctgtggactacatcaggaggctgcagaaggagcagcagagagccaaggagatggagacc
agacagcggaaactggagcacagcaaccgtaacctactgctacgtatacaggagcttgag
ctgcaggcccgcctccacggcctctccacccccgcctcctcctcccagggcagctcctcc
tcacacctaagcctatcacagtccctggaccccagcacgggcgacgccctctccaggacc
ctcctctccctgagtggtggcccaggcctccaggccgcctccccctccttcctgtctcca
cccccctcggcctccccggttggtctgatgaccatggccagccctctggatctggactct
ctgagcttctctgagctggacgacccgtcggccgcagccttccacgcctccctgctgccg
gacatgggtctgggggacatcctgatggacgataggggggtggggatgtcctctgttggg
ggcagagacccgctgctctcctccgtctccccaggagcctccaagacatctagtcgcagg
agcagcttcagcatggaggaagacctgtga
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