Coregonus clupeaformis (lake whitefish): 121546236
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Entry
121546236 CDS
T08357
Name
(RefSeq) leucine-rich repeat neuronal protein 3
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121546236
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
121546236
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
Ig_3
I-set
LRR_9
ig
Ig_2
LRR_EndoS
fn3
LRR_Zer-1
LRRCT
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
121546236
NCBI-ProteinID:
XP_041713271
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All DBs
Position
30:47253537..47271195
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AA seq
706 aa
AA seq
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MKDVSFVDRFFVGLAMTAFVLASEERVDCPQLCMCEIRPWFSPSSVYMEAPIVDCNDLGL
FILPGRLPTDTQVLLLQTNNIAKIEKPLDYLANITEIDLSQNNLSSMSDIHLGRLPQLLS
LHMEENWIRQLPDSCLAELANLQELYMNHNLISSISSTAFQGLHNLLRLHLNSNKLQTIS
SEWFDTMPNLEILMIGENPITSVQDMNFKPLHNLRSLVLTRMNLSQLPDGALSGLDNLES
ISFYDNTFPEVPHAALRNLKNLKFLDLNKNPIGRIQRGDFADMLHLKELGINSMPELVSI
DSFALNNLPELTKIEATNNPKLSYIHPNAFYKLPRLETLMLNGNALSALHRITVESLPNL
REVSMHSNPIRCDCVVRWMNMNKTNIRFMEPDSLFCVEPPEYEGQHVRQVHFREMTEICL
PLISTESMPGHVSIDNGSSVSLHCRAFAEPEPEIYWITPSGTRVLPNTVSDKYYMHPEGT
FDIYDVTENEAGLYTCVAHNLVGADLKSVSVEVDGYFPRPANGSLDVNIKSVQTNSVLVA
WKAAHGGLAPNIKWYTASDPSHPTMSFTARVPSDVKVYNLTHLTPATQYKVCVDIRGILY
KHDTKCVNVTTKGLELAAKDTEKWHAAVIAVFGVLLAVISVACLLIYVSLRNHHLYGDLR
KCHSKVSLMPVAGLHSPFTRLWVSGKGLPTAVEVKPTVINVSDNAF
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacgtgtcatttgtggatcgtttcttcgtgggccttgccatgactgcctttgtt
ctggcctctgaggagagagtcgattgccctcagctatgtatgtgtgagatcagaccctgg
ttctctcccagctccgtgtacatggaggccccaattgttgactgtaatgacttgggactt
ttcattctgcctgggagattaccaacggacacacaagtgctattgctgcagaccaacaac
attgcaaagattgagaaacctttggattacctggccaacatcacagagattgacttgtcg
caaaacaacttatcctcaatgagtgacatccacctcgggcggctgcctcagctgctgtcc
ctacacatggaggagaactggatacgccagctgccagacagctgcctggcagagctggcc
aaccttcaggagctttacatgaaccacaacctgatctcctccatctcctccacagcgttc
cagggcctccacaacctcctccggctccacctcaactccaacaagctgcagacgatcagt
agtgagtggttcgacaccatgcccaatctggaaatactcatgattggagagaatccgatc
acctccgttcaagacatgaacttcaaaccccttcataatctccgaagtctagttctgacc
aggatgaacctatcgcagttacccgacggcgctctatctggcctcgacaacttggagagc
atctcgttctacgacaacaccttccccgaagttccccacgcagctctgaggaacttaaag
aacctcaagtttctggatctaaacaagaatcccattgggaggatacagcggggagatttc
gcggacatgctccacctcaaagagctgggcattaacagcatgccggaactggtttctatc
gacagctttgccctcaacaacctccccgaactgactaagatcgaggccaccaacaacccc
aaactctcctacatccaccccaatgctttctacaagctgcctaggctggagacgttgatg
ctgaatgggaacgcgctcagcgccctacacaggattacagtggagtccctccccaacctg
cgggaggtgagcatgcacagcaaccccatccgctgcgactgtgtggtccgctggatgaac
atgaacaagaccaacatacgcttcatggaaccggattcactcttctgcgtggagcctccc
gagtacgagggccaacacgtccggcaggtccacttcagggagatgacagagatctgtctg
cctctcatctccactgagagcatgcccgggcacgtcagcatcgacaatgggagttctgta
tcactccattgccgggcctttgccgaacccgaaccggaaatctactggatcacgccttcc
ggtaccagggtcctaccgaataccgtttcagataaatactacatgcacccagagggaacg
tttgacatctacgacgtaacagagaacgaggctggactgtacacctgcgttgcccacaat
ctggttggcgcagacctgaagtcagtctctgtggaggtggatggatacttcccccgacct
gccaacggctctttggacgtcaacatcaaatcagtgcagaccaactcggtcctagtggcc
tggaaagctgcccatggcggtctggctcctaacataaagtggtacacggcttccgacccc
agccacccgaccatgtcattcactgcacgcgtaccgtctgatgtgaaagtgtacaatctc
acacatctgactcccgccacccagtacaaggtgtgtgtggacatccgtggcatcctctac
aaacacgacaccaaatgtgtcaatgtcaccacaaagggattagagctggcggccaaggac
actgaaaagtggcacgcagcagtaatcgccgtctttggtgtgcttctcgctgtgatttca
gtggcctgtctgcttatttatgtgtctctgaggaaccaccacctttatggggatttaagg
aaatgccactccaaagtgtccctgatgccggtggccggcctgcactctccttttacgagg
ctctgggtctcagggaaaggactgccaaccgcggtggaagtgaaacccacagtcataaat
gtatctgacaatgccttttaa
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