Coregonus clupeaformis (lake whitefish): 121546269
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Entry
121546269 CDS
T08357
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121546269
04082 Neuroactive ligand signaling
121546269
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121546269
Ion channels [BR:
cclu04040
]
Ligand-gated channels
GABA-A
121546269
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7205
Motif
Other DBs
NCBI-GeneID:
121546269
NCBI-ProteinID:
XP_041713376
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Position
3:9637864..9689563
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AA seq
455 aa
AA seq
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MKNRDYIFQCLLICLSLTLLWQTRPVIADPTTDAFKNNITLFTRILDRLLDGYDNRLRPG
LGDRITEVNTNVYVTSFGPVSDTDMEYTIDVFFRQSWKDERLKFDGPMNILRLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVHAECPMHLEDFPMDFHSC
PLKFGSYAYTMSEVTYVWTSKAADSVVVEGESSRLNQYDLLGQTVGQETIKSSTGEYTVM
TAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKTIVNDKKKEKASA
MTKNNAYAVAVANYAPNINKDSGLSTIAKGGDADPNMAVGKVGGKADPKKTFNSVSKIDR
ISRIMFPVLFSSFNLVYWATYLNREPYIKDMVPST
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatagagactacatttttcaatgtctattaatctgcctctcactgacgctcctc
tggcaaacgaggccggtgattgctgatcctacgacagatgccttcaagaacaacatcact
ctcttcacacggatccttgacagacttctagatggctatgataatcgccttcgacccggc
cttggggatcgtataacagaggtgaataccaatgtctacgtcaccagctttggcccagtt
tcagatacagacatggaatacacaatagacgtgttcttccggcaaagctggaaagacgag
aggttaaaattcgacgggcccatgaacatactgcggctgaacaacttgatggccagtaaa
atatggacgccagacacgttcttccataacgggaagaagtcggtggctcacaacatgacc
atgcccaataaactactgaggattcaagacgatggcaccctgctttacaccatgaggttg
acggttcacgcagagtgtccgatgcatctggaggacttccccatggacttccactcatgt
cccctgaagtttggcagctatgcctatacaatgtcagaggtgacttacgtctggaccagt
aaggctgctgactctgtggtggtggaaggagagagctcccgcttgaaccagtacgacctg
cttggccaaacagtgggccaagaaaccatcaagtccagcacaggcgaatacactgtcatg
acggcacatttccatttgaagcggaagattggctactttgtgatccagacttatctacca
tgcatcatgaccgtcatcctctcccaagtgtccttctggctgaacagagagtccgtgcca
gctaggactgtgtttggtgtaaccactgtcctgacaatgaccaccctgagtataagtgct
cgtaactccctccccaaggtggcctacgccacggccatggactggttcatcgctgtctgc
tacgcctttgtcttctccgccctcattgagtttgccaccgtcaactacttcacaaagcgc
ggctgggcctgggatgggaagaccattgtgaatgacaagaaaaaagagaaggcctccgcc
atgacgaagaacaacgcatacgccgtggcggtggccaactacgcgcccaacatcaacaag
gactctgggttgtccaccatcgccaagggcggcgatgctgaccccaacatggcggttggc
aaggtgggtggcaaagcggacccaaagaagactttcaacagtgtgagtaaaatcgatagg
atttcaaggattatgttcccggtcctgtttagcagcttcaatttagtctactgggctaca
tacttaaacagagaaccgtatataaaggatatggtgccctcaacctag
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