KEGG   Coregonus clupeaformis (lake whitefish): 121546288
Entry
121546288         CDS       T08357                                 
Name
(RefSeq) transportin-3-like
  KO
K15436  transportin-3
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013  Nucleocytoplasmic transport
cclu03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    121546288
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    121546288
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cclu03016]
    121546288
Transfer RNA biogenesis [BR:cclu03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    121546288
SSDB
Motif
Pfam: TPR_TNPO3_IPO13_4th TPR_TNPO3_IPO13_3rd TPR_TNPO3_IPO13_2nd Xpo1 IBN_N KAP122_middle HEAT_MROH2B_C
Other DBs
NCBI-GeneID: 121546288
NCBI-ProteinID: XP_041713403
LinkDB
Position
Unknown
AA seq 921 aa
MEKPTVALVYQAVQALYHDPDPAGKERASVWLGELQRSMYAWEMADQLLQLKQDVESCYF
AAQTMKMKIQTSFFELPPETHIALRDSLLSHIQSLKDLSPIIVTQLALAIADLALQMASW
KGCVHTLIEKYSNDVSSMMFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSSTVVT
LLVTCVEKSGSNEKMLIKVFRCLGSWFNLGVLDSNFMANNQLLMVLFQVLQRDETSTNLH
EAASDCVCSALYAIENVDTHMSLALQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFTEL
CETFLETTVRSPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKTNDPALH
GIFRPYIQRLLHGLARHCQLDPDHEGIPEDTDDFGEFRMRVSDLVKDVIFLVGSMECFSQ
LYSTLKEGNPPWEVTEAVLFIMAAIAKSVDPENNPTLTEVLEQVVLLPETVHIAVRYTSI
ELVGEMSEVVDRNPRFLDPVLNYLMKGLREKTLASVAAKAIHNICSVCRDHMAQHFQGLL
DIARALDSFALTTEAAVGLLKGTALVLARLPLEKIAECLSDLCAVQVMALKKLLSQDPSN
GKAADPTVWLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNTHQADNRIVERC
CRCLRFAVRCVGKGSASLLQPLVTQMVSVYQVYPHSCFLYLGSILVDEYGMEEGCRQGLL
DMLQALCMPTFQLLEQSNGLRNHPDTVDDLFRLATRFVQRSPVTLLSSGIIVHIIQCAIA
ATTLDHRDANCSVMKFVRDLIHTGVINDHEDDFELRKQLIGQAMGQHGQQLVTQLMHTCC
FCLPPYTLPDVAEVLWEIMVFDRPTFCRWLENALKGLPKETSGGAVTVTNKQLTDFHKQV
TSAEECKQVCWAIREFTRLFR
NT seq 2766 nt   +upstreamnt  +downstreamnt
atggagaaaccgacagttgcacttgtgtatcaagctgtgcaggctctttatcatgatccg
gaccccgccggtaaagagcgagcctcggtgtggctgggggagctacagagatcgatgtac
gcgtgggagatggcagaccagctcctccagctgaaacaggacgtggagtcttgttacttt
gccgcccagaccatgaagatgaagatccagacttcgttctttgagctccccccagagacc
cacatcgccctccgagactccctgctctcacacatacagagcctcaaagacctctccccc
atcatcgtcacccagctcgctctggccattgcagacctcgccctacagatggcctcctgg
aagggctgtgtccacaccctcattgaaaagtatagcaatgacgtcagctccatgatgttt
ctgatagagatccttacagtgctccccgaggaggtccacagccgctcccttcgcatcgga
gccaatcgcaggacagagattatcgaggacctggcctattactccagtactgtggtcact
ctactggtgacgtgtgtggagaagtctggcagcaatgagaagatgctgatcaaggtgttc
cgctgtctgggcagctggttcaacctgggagtcctggacagcaactttatggccaacaac
cagctcctcatggtccttttccaagtgctgcagagagacgagacgtccactaaccttcac
gaggctgcgtccgactgcgtgtgttcagcgttgtatgccatcgagaacgtggacacacac
atgtccctggccctgcagctcttccagggcgtcctcacgctggagacggcctaccacatg
gctgtggcacgggaggacctcgacaaagtgttgaattactgtaggatcttcactgagttg
tgtgaaacgtttctggagaccacagtcaggagtccaggccagggcatgggagacctgcgg
acgcttgagctactgctcatctgtgcaggacacccccaatatgaggttgtggagatctcc
tttaacttctggtatcgtctgggagagcacttgtataagaccaacgaccctgccctccac
ggcatcttcagaccctacatccagagactgctgcacggcctggcccgccactgccaacta
gaccctgaccacgagggcatcccagaagatacagatgactttggggagttcaggatgagg
gtgtctgatcttgtgaaggatgtaattttccttgtgggctccatggaatgtttctcccag
ttgtactccactctaaaagaagggaaccctccctgggaggtgactgaggctgttctcttc
atcatggccgccatcgccaagagtgtagaccctgagaacaaccccaccctgacggaggtg
ttggagcaggtggtgctgctgccagagacggtccatatcgccgtgcgctacaccagcatt
gagctggtgggggagatgagcgaggtcgttgaccgcaacccgcggttcctcgaccccgtg
ctgaactacctgatgaagggcctgagggagaagaccctggcttccgtggcggccaaggcc
atccataacatctgctctgtgtgtcgggaccacatggcccagcacttccagggcctgctg
gacatcgcccgtgccctcgactccttcgccctgaccaccgaagccgccgtaggcctcctc
aaagggacagccctggtcctggctcgtttgcccctggagaagattgctgagtgtttgagt
gacctgtgtgctgtgcaggtcatggccctcaaaaagcttctctctcaggaccccagtaat
gggaaagccgctgaccccactgtctggctggacagactagcagtcatcttccgacacaca
aatcccatcgtagaaaatggacagacacacccatgtcagaaagtcatccaggagatctgg
ccggtcctatcagagactctaaacacacaccaggctgataaccgcatcgtggagcgctgc
tgtcgctgcctgcggttcgctgtgcgctgcgtgggcaagggctctgcctctctactacag
ccactagtcacacagatggtcagtgtgtaccaggtgtatccccactcctgcttcctgtat
ctgggcagcatcctggtggatgagtacggcatggaggaaggctgcagacaaggtctactg
gacatgctacaggctctgtgtatgcccaccttccagctattggagcagtccaacggtctc
cgtaaccacccagacacagtagacgacctcttcagactcgccaccaggtttgtccagcgt
agtcccgtcaccctgctcagcagtggcatcatcgtccacatcatccagtgtgccatcgcg
gccaccacactggaccaccgggacgccaactgcagcgtcatgaaattcgtcagagacctc
atccacacgggcgtcatcaacgaccacgaggatgactttgagctgcggaagcagctaata
ggccaggccatggggcagcacgggcagcagttggtcacccagctcatgcacacatgctgc
ttctgcctgccaccttacacactccccgacgtggctgaggtgctttgggagatcatggtg
ttcgacaggccgacgttctgccgctggctggagaatgcgctgaaggggcttcctaaggag
acgtcaggcggggcggtgaccgtcacaaacaaacagctcacagatttccacaagcaagtc
accagtgcggaggagtgtaagcaggtgtgctgggccatccgggagttcaccagattgttc
cgatag

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