Coregonus clupeaformis (lake whitefish): 121546367
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Entry
121546367 CDS
T08357
Name
(RefSeq) sodium/potassium/calcium exchanger 1 isoform X1
KO
K13749
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
121546367
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121546367
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
121546367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
121546367
NCBI-ProteinID:
XP_045075908
LinkDB
All DBs
Position
Unknown
AA seq
736 aa
AA seq
DB search
MHLPQRRRLNRSRILFFLSGVLLCCVYAVTFKARLQEPWVARQAAAEEDPGTALPEEGGG
SDSSSVPEVDTREVVTSNPSTLTEGYNDDVITRAPIVIEGDDVIVITVNRTDIKHCIYVE
DPEPEPPTKPSPTSPPPNTTTPPGIPGDVPHRKGEYPEDLFTVDQRRQGWVTLHILGMVY
MFVSLAIVCDEFFVPALGVITVKLDISDDVAGATFMAAGGSAPELFTSLIGVFISHSNVG
IGTIVGSAVFNILFVIGMCAIFSREMLHLTWWPLFRDVSFYIIDLIMLIVFFLDNTIMWW
ESVMLVSGYVAYVCFMKFNVQIEHFVKTQINKHKSIVKIIMPEEEEEEKEPKKVKPTLQR
GGSNASLHNSTNRNTIFQLMIHTLDPLGEETGFSRDVRGPGQRRVRQETTAFNGEVRTEV
SVQGKVRNRVKPDPLDPAARGKVDLRTHCRPIGGPDKTEEAKPSTSQTPPKEEEKPDPSE
AQTDQGPAGAGGSDGSDSSEEDESEEESEDEEDDEEGDEEEGEEEEGEENEEPLSLEWPD
TRRKQATYLFLLPIVFPLWLTVPDVRNPASRKYFALTFIGSITWIAVFSYLMVWWAHQVG
ETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITMGLPVPWL
IFSAMQGGVPVAVNSNGLFCAIVLLFIMLLFVIISIAACRWKMSRVLGLTMFMLYFVFLV
LSVMLEDRVIICPVSI
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgccacaaagacggagactcaatcggagtcgcatcctcttcttcctctctggt
gtattgctgtgctgtgtctacgccgtgacgttcaaggcccggctgcaggagccatgggta
gctcgccaggccgcagcagaggaggaccctgggacagcactcccagaggaagggggcggt
agtgatagtagtagtgtcccggaggtagacacacgagaggtggtgacctctaacccctcg
accctaacagagggctataatgacgacgtcatcaccagggctcctatagtgatcgagggg
gatgacgtcatagtgataactgtcaacaggacggacattaaacactgtatctacgtagag
gaccctgaacctgagccacctactaaaccttctcccacctcccctcctcctaacaccacc
acccccccgggtatccctggagatgtcccccacaggaagggagagtacccagaggacctg
ttcacggtggaccagaggaggcagggctgggtgaccctccacatcctgggcatggtctac
atgttcgtctccctcgccatcgtctgtgacgagttcttcgtcccggcgctcggagtcatc
accgtgaagctcgacatctccgacgatgtcgccggggcaaccttcatggctgcaggaggc
tccgcccccgaactgttcacctctctgattggcgtgttcatttcccatagcaacgtgggc
atcgggacgatcgtagggtcggcggtgtttaacatcctgtttgtcatcgggatgtgtgcc
atcttctccagggagatgctccacctcacctggtggcccttgttcagagacgtctccttc
tatatcatagacctgatcatgctgatcgttttcttcctggacaacactatcatgtggtgg
gagagcgtgatgctggtgtcgggttacgtggcctatgtctgcttcatgaagttcaacgtg
cagatcgaacactttgtcaagacgcagatcaacaaacacaagagcatcgtcaagatcatc
atgccggaggaggaggaggaggagaaggaacccaagaaggtgaagcccactctccagaga
ggaggcagtaatgcgtctctccacaacagcaccaacagaaacaccatcttccagctgatg
atccacacactggaccccctgggagaagagacgggctttagcagagatgttagaggccct
ggccagaggagagttagacaagaaacaacagcctttaatggggaggtcaggactgaggtg
tcagtgcaagggaaagtgaggaatagagtgaagcctgacccgctggacccagcagccaga
gggaaggtggacctcaggacacactgcagacctataggtggacctgataagactgaggag
gccaaaccctcgacctcccagactccacctaaagaggaggagaaaccagacccgtcagag
gcacagacggaccaggggccagcgggcgcaggggggtccgacggctcagacagcagtgag
gaggacgagagcgaggaagagagcgaggacgaggaggatgatgaagagggtgatgaggaa
gagggtgaagaggaagagggtgaagagaatgaggaacctctgtcgttagaatggccagac
accagacgtaaacaggccacatatctctttctcctacccatagtgttccctctgtggctc
actgtgcccgacgtacgcaacccggcttccagaaagtactttgccttgacgtttattggt
tccatcacgtggatcgctgtgttctcctatctaatggtctggtgggcacatcaggtgggt
gagacaataggcatctcagaggagatcatgggcctgaccatcctggcagctggaacctcc
atccctgacctcatcactagtgtcatcgtggctcgtaaaggactgggagacatggctgtg
tccagctcagtgggatccaacatcttcgatatcactatgggcctgcctgtcccatggttg
atcttctcggcgatgcaaggcggggtgccggtggcggtgaactccaacggtctgttctgt
gccatcgtactcctcttcatcatgcttctcttcgtcatcatcagcatcgcggcgtgtcgc
tggaagatgagccgtgttctgggcctcaccatgttcatgctttactttgtgttcctggtg
ctcagtgtgatgctggaggaccgtgttattatctgccctgtctccatctga
DBGET
integrated database retrieval system
