Coregonus clupeaformis (lake whitefish): 121546378
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Entry
121546378 CDS
T08357
Name
(RefSeq) KH homology domain-containing protein 4
KO
K25780
kelch domain-containing protein 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121546378
Spliceosome [BR:
cclu03041
]
Complex B
Other components
Prp19-related factors
121546378
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
KH_12
Motif
Other DBs
NCBI-GeneID:
121546378
NCBI-ProteinID:
XP_041713550
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Position
20:64901349..64916409
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AA seq
624 aa
AA seq
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MSSGMTGQTPCLTSSSRWDQPAQPKTRVDVEQGFASSVATAQTCTSAPTTPQSAQHPVAG
PLVPQTLRGDMPAAQGGGVEMAAAMAAKINAMLMAKGKLMVPPPLPGKIPPCMPAASGGD
ETVVTEVDINDVPINSRNLLTKGKTQEEIRQFSGAVVSTRGHYMTSAEKSHGKGVERPLY
LHVQGKSQEEVNKAVLRIKEIISEDVLRTAAALGSQLRPVIPPLPLYPQAPRPMAALHPH
LPRMPSVNPPLPHGHRPAAPHQGSFVHVKIFVGLDQALPSFNVNEKVEGPGGMYLAHIQT
ETGARVFLRGKGSGYIEQASRRESFEPLYVYISHPYSTGLEAAKKLTESLLETVRAEHTR
MVSIYTATGSTQPYPAHGYPANSTYSSQGWCSSSGYPGCNGLGLAGGYAASTSYPTPPGP
AGYWTSAASGQPSQSNLSTNPPSSQAMVQYPVCPRKTHPYLLQDPGCSDQTETDLSSSSS
TRTGTGSPKRRFQEKTEDEQASQPASSSPEAPVREKSPPLPSAALREEERGQGAERMLMP
PPLPVFLAPGPVARKRPRETAVPVVPPSLPTSTPASQDSPQEVIVKKIKVVEKPSGLVPY
GGGVMDTSCLVPYGGDSSDEGEDS
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgggatgactgggcagacaccgtgcctaaccagtagcagcagatgggatcag
cctgctcagcccaaaacgagggtagacgtcgagcaaggcttcgcatcctctgtggcgacc
gcccagacctgcacatcggcccctacgacccctcaatcagcccagcaccctgtagccggc
ccactggtgccccagaccttgcggggggacatgccagcagcacaggggggaggcgtggag
atggctgcggctatggctgctaagatcaatgctatgctgatggccaagggaaaactgatg
gttcctccgccactacctggcaagatccctccgtgtatgccggctgccagtggtggagac
gagactgtggtgacagaggtggacatcaacgatgtgcccatcaacagcagaaacctgctc
accaaaggaaaaacacaggaagagattcgtcagttcagcggtgcagtagtctcaaccaga
ggccactacatgaccagtgcagagaagtcccatggaaaaggagtagaaaggcctttgtat
ttgcacgtccagggaaagagccaagaggaggtcaacaaggcagtgctgaggataaaggag
atcatctctgaggatgtgttgaggacagctgcagcgttaggatcccagctgagacccgtc
ataccccccctgcctctctacccccaggcccctcgccccatggctgccctccatccacac
ctgcccaggatgcctagtgtcaaccctcccttgccacacggacaccggcctgccgcgcca
caccaagggagttttgtgcacgtcaagatctttgtgggtctggaccaggccctgccctcg
tttaatgtgaatgagaaggtggagggtcccgggggcatgtacctggcacacatccagacc
gagacgggagccagagtgttcctcagggggaaaggctcggggtacatagaacaggcctca
cgacgggagtccttcgaaccactctacgtctacatcagccacccctactccacagggctg
gaagctgcaaagaaactcacagagagcctgttggaaactgtgagagctgaacatacccgc
atggtctccatctacacagccaccggctccacccaaccatacccagctcatggataccca
gctaatagcacttactctagccagggctggtgcagcagcagtggttacccagggtgtaac
gggctggggctggctgggggctatgctgcctctaccagctaccccacaccgccaggaccc
gctggctattggactagtgctgctagtggtcagcccagtcaatctaacctgtcgacaaac
cctccatcttctcaggctatggttcagtatcctgtctgtcccaggaagacacacccatac
ctattacaggaccctgggtgcagtgaccagacggagactgacctgtcgtcatccagctct
actcggacagggacaggaagtcctaaacgacgcttccaggaaaagactgaggatgagcag
gcctctcagcctgccagcagctcacccgaggccccggtgagagagaagtctccccctcta
ccttcagcagctctgagagaggaagagcgaggacaaggagctgaaaggatgttgatgcca
cctcctctccctgtgtttctggcccccggccctgtggcacgcaagagacccagagagacg
gcagtaccagtggtcccacccagtctaccaaccagcacccccgcatcacaggattctccc
caggaggtgattgtgaagaagataaaggtagtggagaaaccttcaggtttagtgccctac
ggaggtggggtaatggacacttcatgcctagtaccctacggtggggactcttctgatgag
ggagaggactcctag
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