Coregonus clupeaformis (lake whitefish): 121546383
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Entry
121546383 CDS
T08357
Name
(RefSeq) very long-chain acyl-CoA synthetase
KO
K08746
solute carrier family 27 (fatty acid transporter), member 2 [EC:6.2.1.-
6.2.1.3
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03320
PPAR signaling pathway
cclu04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121546383
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
121546383
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cclu01004
]
121546383
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121546383
Enzymes [BR:
cclu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
121546383
Lipid biosynthesis proteins [BR:
cclu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
121546383
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
121546383
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
121546383
NCBI-ProteinID:
XP_041713555
LinkDB
All DBs
Position
20
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AA seq
599 aa
AA seq
DB search
MQDLRYTVTCVVLGFRTDRIKRSKPFYSMLDCFLDKVKKHPNKPFIVFENSSYTYRDVDK
QSNKFARALSQHASVKEGDTVALFMGNEPMYVFIWLALAKLGCTAALLNYNIRSKSLLHC
FTCCGANVLLAASELRGEVDEVLPTLREQSVSVFVLGQGVEEAECVMEGMKTLSSSRIQQ
ASDQPLDPQLRSKVTLKSPALYIYTSGTTGLPKAAVITHERLSMASSLQFISGVASDDVI
YIYLPLYHTAGFMMGLTGAIERGITIVLRRKFSASNFWDDCRKYNVTVIQYIGEIMRYLC
NAPKKDNDRHHKVRLALGNGLRADTWSEFLQRFGDIRVCECYGATEGNGGFINYIGKVGA
IGKEHFLHKASFSYALIQYDTEREEPVKDSRGFCIKVPKGETGLLVSKISARAPFNGYAN
NQQQTDRKKLTDVFVKGDLYLNSGDLLRIDHQGFVYFMDRIGDTFRWKGENVATTEVTEH
LIMVECIEEANVYGVKVPGHEGRIGMAAVKLKDDVEFDSKATFQHVTTSLPSYARPRFIR
IQNSLAVTGTFKQMKAKLAEEGFNPSVIQDRLYYLEDSKGYIPMTQEIYDSISDGKIRL
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacctgcgctacacagtgacgtgcgtcgtactcgggttccgaacggacagaatc
aagaggagcaaaccgttctacagcatgctggactgttttctcgataaggtcaaaaaacac
cccaacaaaccgtttattgtattcgagaatagttcgtatacgtaccgggatgttgacaag
cagagcaacaagttcgcccgggcgctctcacagcacgcaagcgtgaaggaaggggacact
gtcgcactcttcatgggcaacgagcccatgtacgtgtttatctggctggccctggctaaa
cttggatgtacagccgcgctgctcaactacaacatcaggtccaagtccttattgcactgt
ttcacctgctgcggagccaacgtgctcctggctgcttcagagttgcgtggagaggtagat
gaggtgctccccaccctgagggagcagagtgtaagtgtgttcgtgctgggtcagggtgtg
gaggaggcagagtgtgtgatggagggcatgaagactctgagcagcagcaggatacagcag
gcctcagatcaacctctggacccacagctcaggtcaaaggtcaccttaaagagccccgcc
ctctacatctatacctcgggaactacaggtctgccgaaggctgcagtgatcacccatgag
aggctgtccatggcctcctctctgcagttcatctcaggtgtggcctctgatgacgtcatc
tacatctacctgcccctctaccacaccgccggcttcatgatgggcctgactggagccata
gagagaggcatcaccattgtcctgaggcgtaaattctctgcctctaatttctgggatgac
tgcaggaaatacaacgtgacagtgatccagtacataggagagatcatgaggtacctctgt
aatgcacccaagaaagataatgacaggcatcacaaggtacgtctggccctgggtaacggg
cttagagcagacacctggtcagagttcctgcagcgtttcggtgacatccgtgtctgtgaa
tgctacggcgccaccgagggaaatggcggcttcatcaactacatcgggaaagtcggcgcg
atcggcaaagagcacttccttcacaaagcaagcttctcatacgctctgattcagtatgac
acagagagagaggaacctgtcaaagactctagaggtttctgtatcaaagtccctaaagga
gaaactggtctactggtttccaagattagcgcgcgggctccgttcaatggctatgctaat
aaccagcagcagacagacaggaagaagctgacagatgtgtttgttaagggagatctgtac
ttaaacagtggagacctgctgaggatcgaccaccagggatttgtttacttcatggaccgc
atcggagacaccttcaggtggaaaggagagaacgtggccaccacagaggtgactgagcac
ctgatcatggtggaatgtatcgaagaagccaacgtctacggtgtcaaggttccaggacac
gaggggaggatcgggatggcagctgtcaaactgaaagatgacgtggagtttgacagcaaa
gccacgttccagcacgtcacgacgtccctgcccagctacgctagaccacgcttcatacgc
atacagaattccctggctgtgactggaacattcaagcagatgaaggcaaagctagccgaa
gagggattcaacccatctgtgatacaggatcgattatactacctggaggacagtaagggc
tacatccccatgacacaggagatttatgactctatttctgatggaaagatacggttatga
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