Coregonus clupeaformis (lake whitefish): 121546384
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Entry
121546384 CDS
T08357
Symbol
usp8
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8 isoform X2
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04137
Mitophagy - animal
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121546384 (usp8)
04137 Mitophagy - animal
121546384 (usp8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121546384 (usp8)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121546384 (usp8)
04121 Ubiquitin system [BR:
cclu04121
]
121546384 (usp8)
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121546384 (usp8)
Peptidases and inhibitors [BR:
cclu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121546384 (usp8)
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Others
Others
121546384 (usp8)
Ubiquitin system [BR:
cclu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121546384 (usp8)
BRITE hierarchy
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
Motif
Other DBs
NCBI-GeneID:
121546384
NCBI-ProteinID:
XP_041713556
LinkDB
All DBs
Position
20:complement(64516885..64548801)
Genome browser
AA seq
1108 aa
AA seq
DB search
MPAVSSGVKGLYLSTNLGDLNKKAEVKPDKINTRSYVQSACKIFKAAEECRLDGDEEKSY
VLYMKYLTVYDLIKKRPDFKQQQEFFLSMLGPTSFKKAIEEAEKLSESLKLRYEEVEVRK
KLEEKERQEERKRREDRTEKGGGRASPKGGKENKKVKEQKELKNGPSKAAVPAGGITAEG
LFKMMKDQAITVIVMDARCLQDFQDSQIQVPTQTVISVPEEAINPGITVNQIEANLPDAS
RETWKRRGFVDYIILLDWFSSVTDLKLGTTLQSLKDALYKWDSATILRSEPMVLEGGYES
WLLFYPMYTSNAKVRPPRTHNYNTLPQLNFSYPSLEEPKPPSPPPPEPDPEPQVPPASLG
SVQVNGAPPEDLAHSHPETPSTGMEADATDSPRTGPTQPGVGHSKKGPGSGPGTTSQPGG
TAKHIPQIDRTKKPSVRVSDGSKPPLDALPRDLPPSSQNGLFGPQPNRSVKPAFDPSVPL
TDEERSQIHTETAALMEKARREQEQRKQERSTEEEWRERERRENQEKEEQERPGKENEEE
EEKRRKEKENGVGEEREKKGEREDTPTKSASLDSPAPNHIVTEIKAPSPMKLSSAVKRRS
CQTGILNHRTADDYDIPKRELLTRARSEEMGRRVPGLPVGWMKFLDTVTGTYRYYHSPTN
RVHLYPPEVSVPQTPPSTPPTAKHKQPRPAEPDKTMDRDQEQSKLKRSYSSPDITQDLRE
EGIKKVTAPITAAPTFNRETKPPTANVYAKVEIARPSAAKIRNLNPVFGGLGASLTGLRN
LGNTCYMNSILQCLCNTPAMVDYFNKNYYQEDINRANILGHRGEVAEEFGVIMKALWSGL
YKFISPRDFKITIGKINESFSGFEQQDSQELLLFLMDGLHEDLNKADNRKRYTEEDNDDL
DDQRAADQAWSKHKMLNESVIVALFQGQFKSTVQCLTCHKKSRTFETFMYLTLPLASTNK
CSLQDCLKLFSKEEKLTDNNKVFCRHCKALRDSIKKLEIWKVPPIILVHLKRFSFEGRWK
QKLQTTVDFPLENLDVSQYVIGPRASLKRYNLFGVSNHYGGLDGGHYTAYCKNAVKQRWY
KFDDHEVSEISTSTVKSSAAYIFFYSSL
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagtgtccagtggggtgaagggcttgtacctctctactaatctgggggacctc
aacaagaaagctgaagtcaagcctgacaaaatcaacaccaggagctatgtccagagtgcc
tgtaagattttcaaggctgcggaggagtgtcgtctggacggagacgaggagaagtcctac
gttctctacatgaaatacctgacagtctatgatctcatcaagaagaggcccgacttcaag
cagcaacaggagtttttcctgtccatgctggggcccaccagctttaaaaaagccatagaa
gaagccgagaagctctctgaaagccttaagctcaggtacgaggaagtcgaggttcgcaaa
aaacttgaggagaaagagagacaagaggagaggaaaaggagggaggacaggacggagaaa
ggaggagggcgggcgtctccaaaaggagggaaagagaacaagaaggtgaaggagcagaag
gagttgaaaaatggaccttcaaaagctgcagtgccagctggagggatcacagcagagggg
ttgttcaagatgatgaaggaccaggccattacggtcattgtgatggacgctcgctgcctc
caagacttccaggactcacagatccaggtccccacacagactgtcatcagtgtcccagag
gaggctatcaaccctggcatcacagtgaaccagatagaggccaatctacctgatgcatcc
agagagacgtggaagagacgggggtttgtagattacatcatcctgctggactggttcagc
tctgtcactgacctcaaactgggaaccaccttacaaagcctcaaagatgctctctacaag
tgggacagtgccactatcctgcgtagtgagcccatggtcctggagggaggctatgagagc
tggctcctcttctacccgatgtacacatccaacgccaaagtcagaccgccccgaacacac
aactacaacaccctcccacagttgaacttcagctacccgtcactggaggagcccaaacct
ccatccccccctccccccgagccggaccctgaaccccaggttccccctgcctccctgggt
agcgtacaggtgaacggtgcccccccggaggacctggcccactcccaccctgagaccccc
tccacagggatggaggctgacgccacagactcaccccgcacagggcccactcagcctgga
gtgggccacagcaagaagggccctggatcaggaccaggcacaaccagccagcctggaggg
acagccaagcacatcccacagatcgaccgcaccaagaagccatcagtcagggtttcagac
gggtctaaaccccccctggatgccctcccaagggacctgcccccctcctcccagaatggc
ctgtttggaccccaacccaaccgctcggtcaaaccggcctttgacccttcggtcccgctg
acggacgaggaacgcagtcagatccacacggagacggctgctctgatggagaaggcccgg
agagagcaggaacaacgcaaacaggaacgcagcaccgaggaggagtggagagagagggaa
cggcgggaaaaccaggagaaagaagagcaggagaggcctgggaaggaaaatgaggaggag
gaggagaagaggaggaaggagaaggagaacggggttggggaggagcgagagaagaagggg
gagagggaggatacgccgacaaagagtgcttctctggactcgccagctcccaaccatatc
gtcactgagattaaggccccctcccccatgaagcttagtagtgctgtaaagaggaggagc
tgtcagactgggatattaaaccacagaacagctgacgactatgacatacccaagcgtgag
ctcctgaccagagccaggagtgaggagatgggtagacgtgtaccaggcctgcctgtcggc
tggatgaagttcttagacacggtaaccggtacctaccgttactaccattccccaaccaac
cgggtgcacctctacccccctgaggtcagcgtgccccagacgcccccctccaccccacct
acggccaaacacaagcagccccgccccgctgagccagacaagaccatggaccgcgaccag
gagcagtccaaactgaaacgctcctactcctctccagacatcacccaggacctgagggag
gaggggataaagaaggttaccgcccctataactgctgccccaacctttaacagggagacc
aaaccccccactgctaacgtctatgccaaggtggagattgcccgtccgtctgcggctaag
atccgtaacctgaaccctgtgttcggcggtctgggcgcgtcgctcaccggcctgcgtaac
ctaggcaacacctgctacatgaactccatcctgcagtgtctctgcaacaccccggccatg
gtcgactacttcaacaagaactactatcaggaggatatcaacagggctaatatcctgggt
cataggggcgaggtagcggaggagtttggtgtgatcatgaaggctctgtggtcgggcctg
tataagtttatcagcccccgtgactttaagatcaccatagggaagatcaatgaatcgttc
tctggctttgaacagcaggactcccaggagctactgctgttcctaatggacggactgcac
gaggacctcaacaaggctgataaccgtaagcgctacacggaggaggacaatgatgatctg
gatgaccagcgggctgctgaccaggcctggagcaaacacaagatgctcaacgagtctgtc
atcgtagcgctgttccagggacagtttaagagcactgttcagtgtctcacctgccacaag
aagtcacgcaccttcgagaccttcatgtacctgaccctgccgctggcctcgaccaacaag
tgctccctgcaggactgtctgaagctgttttctaaagaggagaagctgaccgacaacaac
aaggtgttctgtcgacactgtaaagctctcagagactccatcaagaaactggagatctgg
aaggtcccgcccatcatactggtgcacctaaaacggttctcgttcgagggccgttggaag
cagaagctgcagacgacagtagactttcctctggagaatctagacgtcagtcagtacgtc
atcggacccagagccagcctcaagagatacaacctgtttggggtgtctaaccattatggt
ggtctggatggtggtcactacacagcctactgtaagaacgccgtgaaacagcgctggtac
aagtttgacgaccacgaagtctccgaaatctccacctccaccgtcaagtcctccgcagcc
tacatcttcttctactcctccctgtga
DBGET
integrated database retrieval system
