Coregonus clupeaformis (lake whitefish): 121546392
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Entry
121546392 CDS
T08357
Symbol
cars1
Name
(RefSeq) cysteine--tRNA ligase, cytoplasmic isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121546392 (cars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cclu01007
]
121546392 (cars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cclu03016
]
121546392 (cars1)
Enzymes [BR:
cclu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
121546392 (cars1)
Amino acid related enzymes [BR:
cclu01007
]
Aminoacyl-tRNA synthetase
Class I (G)
121546392 (cars1)
Transfer RNA biogenesis [BR:
cclu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121546392 (cars1)
Prokaryotic type
121546392 (cars1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
Arc1p_N_like
Motif
Other DBs
NCBI-GeneID:
121546392
NCBI-ProteinID:
XP_041713582
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All DBs
Position
28:21979036..22008671
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AA seq
818 aa
AA seq
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MSSSGGLAFDYGFLLHTRDEVTATMALNEYLSSRSYLAGFSPSRADQEAFELLHRPPAPQ
HVHALRWYRHIAALQRDTPSPDSSIKGKRVQPPWSAPAGSNVPKLRLYNSLTRTKELFVP
QNGNKVLWYCCGPTVYDASHMGHARSYISFDILRRILMNYFKYDVFYCMNITDIDDKIIR
RARQNYLLEQYREKKPAVAQILQDVLSARGPFQAKLAETTDPDKKQMLERLDSAVSAALG
PLQGAVESKAGEADIQRLAQVLLEEAKDLLSDWLDAQFGSQVTENSIFSLLPKFWEGEYH
KDMDALNVLPPDVLTRVSEYCPEIVDFVKKILDNGFGYESNGSVYFDTAKFDTSQKHAYG
KLVPEAVGDMKALQEGEGDLSVSADQLSEKRSQNDFALWKASKPGEPSWDSPWGKGRPGW
HIECSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSEAYFENDHWVRYFLHTGHLTIAG
CKMSKSLKNFITIKDALAKNTARQLRLAFLMHSWKDTLDYSPNTMESAVHYEKFLNEFFL
NVKDILRAPCDITGQFEKWEAAEMELNESFYERKAAVHEALCDNVDTRSTMEEMRVLVTQ
SNTYIASRKSSKLQPNRMLMKSIALYLTDMLKTFGAIEGSEPIGFPVGGDGQHVDMENTV
MPYLKVLSDFRESVRKIAREQNVTEVLQLCDGVRDDTLPELGVRLEDHEGLPTVVKLVDK
ETLLREKNEKKKMEDEKKIKKEEAAKKKQEQELAKLAKMKISPCDMFRSETDKYSCFDET
GFPTLDVEGKDISKGQAKKLRKLYEAQEKLHQAYQNGC
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagctcgggagggttagcctttgattatggcttcttgctgcacacacgtgacgag
gtcaccgccaccatggccctgaatgagtacctgagctcccgcagctacctggctgggttc
agcccctctcgggcggaccaggaggcctttgagctcctgcacaggcccccggccccgcag
cacgtgcacgctctgcgttggtacaggcacatagcagccctgcagcgggacacccccagc
ccagatagcagcataaagggaaagcgggtccagcccccctggtctgccccagccgggtcc
aacgtgccaaagctgagactctacaacagcctcacacgcaccaaggagctgtttgttccc
cagaatggaaacaaggtgctgtggtactgctgcggacccactgtctatgatgcctctcac
atgggacatgccagatcttacatatctttcgatatcctccgaaggatactgatgaactat
ttcaaatatgacgtgttctactgcatgaacatcactgacatagatgacaagatcatcagg
cgggccagacagaactacctcctggaacagtacagggagaagaagccagcggttgcccag
atactgcaggatgtccttagtgccagagggcccttccaggccaagctggccgagaccaca
gacccagacaagaaacagatgctggagaggctggactctgccgtctctgctgccctggga
cccctgcagggggcggtggagagcaaggctggggaggctgacatacaacgcctggctcag
gtgttactggaggaggccaaagacctgctgtctgattggttggatgctcagtttggcagt
caagtgaccgagaactccatcttctctcttcttccaaagttctgggaaggggagtaccac
aaggacatggacgccttgaatgtccttcccccagacgtactcacccgggtcagcgagtac
tgcccagagatcgtggactttgtgaagaagatcctagacaatggcttcgggtacgagtcc
aacggttcagtttattttgacacagccaagtttgacaccagccagaagcatgcgtacggc
aagctggtacctgaagcggtcggtgacatgaaagctttgcaggagggagagggagacctg
agtgtctcggcagaccagctcagtgagaagaggtcgcagaatgacttcgccctgtggaag
gcctctaagccgggggagccgtcctgggactcgccctggggaaagggacgtccaggctgg
catatcgaatgttccgctatggctggttccatcttgggagaatccatggacatccacggg
ggagggtttgacctcagattcccccatcacgataatgagttggctcagtccgaggcttac
tttgagaacgaccactgggttcgctacttcctgcacactggtcacctgaccatcgcaggt
tgcaagatgtccaaatctctcaagaacttcatcaccatcaaggatgccctggcgaagaac
acagctcggcagctccgtctagccttcctgatgcattcctggaaggacaccctggattac
tcccccaacaccatggagtcagctgtccactatgagaaattcctgaatgagtttttcctc
aacgtcaaagacattctcagagctccctgtgacatcaccggacagtttgagaagtgggag
gcagccgagatggagctcaacgagagtttctatgagaggaaggcagcagtccatgaggcg
ctgtgtgacaacgtggacacgcgcagcaccatggaggagatgagggtgctggtgacccag
agcaacacctacatagccagcaggaagagctccaagctgcagcccaaccgcatgctgatg
aagagcatcgctctctacctgactgacatgctcaagacctttggggccattgaagggtca
gagcctattggattcccagtgggaggagatggtcagcatgtggatatggagaacacggtg
atgccctatctgaaggtgctgtcagacttcagagaatctgttcgcaaaatcgccagagaa
cagaacgtgacagaggtgctacagctgtgtgacggggtccgtgatgacaccttacctgag
ctgggggtgcgtctagaagatcatgaaggccttcccacggtggtgaagctggtggataaa
gaaacgctcctgagggagaagaatgagaaaaagaagatggaggacgagaagaagatcaag
aaagaggaggctgccaagaagaagcaggagcaggagttggccaaactggcaaagatgaaa
atctccccatgtgatatgttccgctctgaaacagacaagtattcctgctttgatgaaacg
ggtttccctacgcttgatgtggaggggaaggacatcagtaagggacaggccaagaagctg
cggaaactctacgaggcccaggagaaactgcaccaagcgtatcagaatggctgctga
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