Coregonus clupeaformis (lake whitefish): 121546394
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Entry
121546394 CDS
T08357
Name
(RefSeq) carnitine O-palmitoyltransferase 1, liver isoform isoform X1
KO
K08765
carnitine O-palmitoyltransferase 1, liver isoform [EC:
2.3.1.21
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00071
Fatty acid degradation
cclu01212
Fatty acid metabolism
cclu03320
PPAR signaling pathway
cclu04148
Efferocytosis
cclu04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
121546394
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121546394
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
121546394
03320 PPAR signaling pathway
121546394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121546394
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
121546394
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
121546394
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Carn_acyltransf
CPT_N
HATPase_c_3
Motif
Other DBs
NCBI-GeneID:
121546394
NCBI-ProteinID:
XP_041713587
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Position
28:complement(21965709..21980068)
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AA seq
789 aa
AA seq
DB search
MNITLISLARTSGRVMAEAHQAVAFQFTVSPDGIDLQLSHEALRQIYLSGLHSWKKKFIR
FKNGVMTGVYPGSPTGLMLVVGLYMGRAKYVQADPSFALFTKVGAHLPVSRYMSFENQQV
VGGVLVGTGLWVAVFFTMRTALKWLLSWHGWMYACHGTVPWRTRIWLVLVKIFSGRRNPQ
LYSFQTSLPQLPLPSVKDTINRYLESARPLMDDEQYLRMEGLAKDFEKGLGPRLQWYLKL
KSWWATNYVSDWWEEYIYLRGRGPIMVNSNYYAMDFLYVFPTSLQAARAGNAIHAIMLYR
RMLDRAQIKPLFALDKRVPLCSAQWERLFNTSRLPGLERDTIQHMRDSRHIVVYHRGRYF
KVAMFYDGQVLSPRAVEQQMERILADPSEPQPGEETLAALTAGDRVPWAEAREAYLRQGR
NQQALDTVEKAAFFVTLDDTEQRYKADDPVRSLDSYAKSLLHGKCYDRWFDKSFNLIVFR
NGTMGLNAEHSWADAPIIGHLWEHVLSMDPVKLGYTEEGHCKGNPHPSLPGPQRLQWNIP
AECQTAIASSLMVAKALADDVDSHIIPFNSFGKGLIKKCRTSPDAFIQIALQLAHFRDKG
RFCLTYEASMTRMFREGRTETVRSCTVETCAFVRSMVDDTPRELRLKLLMEAATRHQHLY
RLAMTGGGIDRHLFCLYVVSKYLGEDSAFLKEVLSEPWRLSTSQTPLQQVELFDLSRHPE
YVSSGGGFGPVADDGYGVSYIILGENLINFHISSKHSSPETDSHRFGKHIKQAMLDILAL
FQLDANALA
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgaatataacgttaatatctttggctagaacctctggcagagtcatggcagaagctcac
caggctgtggcgttccagttcaccgtctctccagacggcattgatctgcagctgagccac
gaggccctgagacaaatctacctgtctggcctgcactcctggaagaaaaagtttatccgc
ttcaagaatggggtgatgaccggtgtgtaccctggcagtcccaccggcctgatgttagtg
gtggggttgtacatggggagggcaaagtacgtccaagctgacccttccttcgcactgttc
accaaagtgggtgctcacctgcctgttagtcgctacatgtcctttgagaaccagcaggtg
gttggcggggtgctagttggcacagggctctgggtggctgtcttcttcaccatgcgaact
gcactcaagtggctgctctcctggcatggatggatgtatgcctgtcatggcaccgtgccg
tggaggacacgcatctggctggtactggtgaagatcttctccggcaggcgaaatccccag
ttgtacagcttccagacatcgttaccacagctccctctgccctcagtgaaggacaccatc
aatagataccttgaatctgcccgtcctctcatggacgacgaacagtacttgaggatggag
ggtctcgccaaggattttgagaaaggcctgggtcctagacttcagtggtacctgaaactc
aaatcttggtgggctacaaactatgtcagtgactggtgggaggagtacatctacctaaga
ggccgtggaccaatcatggtcaacagcaactactatgcaatggacttcctgtatgtgttt
cccaccagtctgcaggccgctcgggcaggcaatgctatccatgccatcatgctgtacagg
agaatgctggaccgagcacagatcaaaccgctctttgcactggataaaagagttcctctt
tgctccgcccaatgggagcgcttgttcaatacgtcccgcctcccaggcctggaacgggac
accatccagcatatgcgggacagcaggcacatcgtggtgtaccaccgggggcgctacttc
aaagtggccatgttctacgacggtcaggtgctgtcgcccagggccgtagagcagcagatg
gagcgcatcctggctgacccctctgaaccccagccgggggaggagaccctggccgccctc
actgctggggacagggtgccctgggcggaagcccgcgaggcctacctgagacagggcagg
aaccagcaggccctggacaccgtggagaaggctgccttctttgtgaccctggacgacaca
gagcagcgttacaaggctgacgatcccgtccgctccctggacagctacgccaagtccctg
ctgcacggcaaatgttacgacaggtggtttgataagtccttcaacctcatcgtgttcagg
aacgggaccatgggtctgaacgcggagcacagctgggcagatgcccccatcatagggcac
ctctgggagcatgtgctgtcgatggaccctgtcaagctgggttacacagaggaaggccac
tgcaaaggaaaccctcacccgtccctcccaggcccccagaggctgcagtggaacatccca
gctgagtgtcagacggccatcgccagctcgctgatggtggccaaggccctggcagacgac
gttgactcccacatcatccccttcaacagcttcgggaagggcctgatcaaaaagtgtcgc
accagccctgatgccttcatccagatcgccctgcagctggctcacttcagggacaagggg
agattctgtctaacgtacgaggcgtccatgacgcgcatgttcagagaggggcgcacagag
acggttcgttcctgcaccgtggagacctgtgccttcgtccgctccatggtggacgacacc
ccgagagagctgcgactgaagctgttgatggaagctgcgacgagacaccagcacctgtac
cggttggccatgaccggaggaggcatcgaccgccacctcttctgtctctacgtggtctcc
aagtacctgggagaggactcagccttcctcaaagaggtgctgtcggagccctggaggttg
tccaccagtcagactcccctccagcaggtggagctgtttgacctgtccagacacccagag
tacgtgtccagcgggggaggctttggcccggtggcagatgatggatatggtgtgtcctac
atcatcttgggagaaaacctcattaacttccatatctccagcaagcactccagtcctgag
acggactctcatcgttttggaaaacacatcaaacaggccatgctcgacatcctggcctta
tttcagctggatgcaaatgccttggcgtga
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