Coregonus clupeaformis (lake whitefish): 121546448
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Entry
121546448 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: piezo-type mechanosensitive ion channel component 2-like
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121546448
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121546448
Membrane trafficking [BR:
cclu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
121546448
Ion channels [BR:
cclu04040
]
Other channels
Mechanosensitive channel (Piezo)
121546448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_TM1-24
Piezo_TM25-28
Piezo_THU9_anchor
Piezo_cap
THU_Piezo1
FAM210A-B_dom
YncO
Motif
Other DBs
NCBI-GeneID:
121546448
NCBI-ProteinID:
XP_045068346
LinkDB
All DBs
Position
Unknown
AA seq
2709 aa
AA seq
DB search
SSFRYNGLSVVYFLFLLTLPLLPNPSLTSMQGKTGTFLLLICSTSVTFLALQCFMQITFA
YVPQYENEYWENILYHLGIVRFSLVDAGNIVRLLAPDLGLFLSGLFILRLVRKLLRPMPQ
LNQNCIAPSDPEDVDMSDSESEVGSEVTGGSSYDSSDESIAVPAALPQFVQKFIAFALGL
RLLLSAIMNTAGKVVVTILLGLAGITLPSLTSVVYFGTFLGLVWWWVLLRSLSMLFFSTL
CVMMAIFSTGHLLSLYLYQLPLAQQIVPPQDIYARLFGITAVIQTNETEPYSLGLQPDVS
WPVFTNPIVLLLLYYTLVALLHKWVNITEEEEDTLEKSESPVETHEDPPSFSKILFISGD
RLELLTSTDDEAYMPEEVHEPMVLLMSSSWHDLRGQEVGSLLVGPAAGYSNCYPPPQYEG
IDLSLSQESEEVKEMSEEEKERSEEEKERSEVSIQDTETIPTPPGPSGLVVFGLFIMKHS
YVSALIIMMVWSITYNSWLTFALLVWSCLIWMMRDRRRYAMMSAPFLAVYGTVLLLLAFL
SGLRLRQDELYPGLPHAVLVDFDMVTYPVPCVHLGAKMFYAFSFLLLFRQQLKEKQEEQD
LKESEESLDEVKVLPSDEGDTSSIMEMLGSAVKGTLVKYWILFCCSTFFVVSFSGKVMVY
KILYIVLFLFCVVLYQICYDMWRRVLKYFWAVVVGYSMVVLIAIYMYQFKTVSGLFRQIM
GMSEEGLRDLGLEQYDTVELFARILLPAAFLLACILQLHYFNQDFLDLTDLDNIPVRQGQ
TREEELRNSINVIADMMAKEHSKQMSGESGRVGSQHTLDSDGLSASSEKKPEEEQEGTGP
PEERLTQWGLIVDRAGLLLLQALAVFQRAQEIGWRLLELHSLKIVSTGIIWVSLQEVSLM
NFLFLVLWAFALPFPRLRPIASSVSSVWTCVMVVCKMLYQLKVIKPLEYSSNCTTVSSLT
TRMPNTDQILTNSLFXLLRRSVLYVKPVDPAIWCGELRKCEDRILPCLRNHLMVLGLLMF
EVTVHRHQLYYRLRNDLKVPTFSIIFQGITRQHLDHGILPCIKYFINYFFYKFGLEVCFV
VAVNVIGQRMDFYALLHSCALIAVLSRRRRKAMGEVWPKYCCFTAGLMVLQYLLCIGIPP
ALCVDYPWRTSSQALTSNLIKWLYLPDFAMRPAPSFIFYDHLLLLCSSLQWNMFEEENRA
AVRLMAGENVEISRSLDPRSFNQYIPVNNFLHCRSYLDMVKVFVFSYFFWLVLCLIFITG
TTRINIFCLGYLLACFYFMLFGGSLLMQPVRYILRLWDWLIGYTCFVIGMKNLLSLGSCA
YLDSLLKNGCWLIQAFSMVCTIKGYDLPAPDDECELPEGEAGIVWDAICFTVLLAQRRVF
LSYYFLYVVSDLRASKILASRGAELFEAKVKKLVAARLEMEKKSVETLKKQMEKIKSKQK
SKPGQGDAAAPPTDIVPKGEIEKSENDQEKWWKPWVSRPGVGNDCGYHLFESDSEEEEEE
VQEKKEEEAPPKKKSAFQLAYEAWVTSSKAALNLHEKEEKRRAKKQLQRQQGIERAESSE
DELEVEEEEEAEEKENIFQRIIDSLKFLWVFILSLLDDLTEGLNSFCKDGLDISKVLRFE
RALLGQQQKKGKEVSQESVKRFYENWMSRQNTLASLEDQEDIVPPVSSPPPVPSSPRGYS
KLKHGHSKISWGSSLSSCMTDETLLGSRQPTLDELDDPPILQPAADQLRRKLLKTANLDL
GSFDTEDPPPSHDDTVPNKEDSKEGEDAYEEEEGEYKEEEEYRMEEEEWREEEEEEREKA
VMLSGSISLDYLECDENSEDFPDSPRPLSETRNLTASELLLNNMFGNDEIEASDQFFQSL
PRHLRLVFALYNTMVSKSEMLCYFVIILNHMVSASLLSLILPILIFLWAMLSVPRPTKRF
WMTAIIYTELIVVVKYFFQFGFFPWTTSAYRGINADRPFALPNIIGVEKKDGYVVFDLIQ
LLALFFHRSILKCHGLWDNKEVEMPDFFKKLKKKTEKKKMSGGDKAGDQPKRRLPFLPLQ
ASTASLFRRRGKANSTETNDDMQHKKRHSKKKRHHNKVPLTRKERIKKLIRERMLETKAA
IIEVALHIYLPIRQFFYDIIHPEYSPVCDVYALMFLIDVINFIVIIFGYWAFGKHSAAAD
ITDAIGEDQVPSAFLVMLLIQFGTMIVDRALYLRKTLMGKCVFQVVLVFGIHFWMFFILP
GVTERRFNMNQVAQLWYFVKCIYFGLSAYQIKCGYPNRVLGNFLTKNYNYLNLFLFQGFR
LVPFLIELRAVMDWVWTDTTLSLGSWICVEDIYANIFILKCWRESEKKYPHTPGQKKKMV
VKYGMGGFIIFFLISVIWFPLLFMSLVKSVAGVTNQPLDVSIQLSIAGYEPLFTMSAQEQ
NLVPYSQAGLNRLTNLYATHPSAMQFLVNYMAEDIVIAKIKSDASLLWSISPASRDAMIH
ELSNSTHIYITLRWVLLRNASLSMNVETVGEHTVKYEDRALRDQIVQMLKGTHNDSVVIE
SLLPKFIRGPGGLESKMATRLDVEHSDRPEDLQMLAFYRPLSIKLQRAEDNGSAEGGQWW
MVEECTPGQGHVQSSCHSIEIVVFNDKVSPSSLGALAGQGIVGLYMSVVLVVGKFVREFF
NGISRSIMFEELPCVDRVLKLCTDIFVVRETGEMELEETLFEKLIFLYRSPETMIKMTRE
KRLESTITF
NT seq
8132 nt
NT seq
+upstream
nt +downstream
nt
cgtcatccttccggtacaatggtctgtctgtggtgtatttccttttcctgctcacccttc
ccctgctgccaaacccctctctcacctccatgcaaggaaaaacagggacgttcctgctgc
tcatctgttctaccagcgtgacgtttctggctctccagtgtttcatgcagatcacttttg
cctacgtacctcagtatgagaacgaatattgggagaatattctctaccatctgggcattg
tacggttcagtttggtggatgcagggaacattgtgcgtctcttagcccctgatctggggc
tcttcctgtcagggctcttcatactgcgcctggtcaggaagctgctgcgccccatgcccc
aacttaaccagaactgtatcgcaccctctgaccctgaggatgtggacatgtccgactcag
agtctgaggttggcagtgaggtcacaggcggctcgtcctatgacagttcagatgaaagca
tagcggtgccggcagcccttcctcagtttgtccagaagttcattgcatttgcccttggac
tgcgcctcttgctgtccgccatcatgaacacagcagggaaagtagtggtcaccatactac
tagggctggcaggcatcactctgccctccctgacctcagtggtgtatttcgggacgttcc
tgggcctggtgtggtggtgggtgttactccgctccctcagcatgctgttcttcagtaccc
tctgtgtgatgatggctatattcagcaccggtcacctgttgagcctctacctgtaccagc
tgcccctggcccaacagatcgtacccccacaggacatctatgccaggctgtttggtataa
cagcggtcatccaaaccaatgagactgagccatacagtctgggtctgcagccagacgtca
gctggcctgtcttcaccaaccccattgtgctgctgctcctctattacacactggtggctc
tgctgcacaagtgggtcaacatcactgaggaggaggaggatactctggagaagtctgaga
gtccagtagaaacccatgaggatccccccagcttctccaagatcttattcatctcaggag
acagactggagctactgaccagtacggatgatgaagcgtacatgccagaggaggtacatg
agccaatggttttactgatgagcagctcatggcatgatctgagaggacaggaggtggggt
cactgctggtagggccagcggcaggatattcaaattgctaccctccaccacaatatgaag
gaatagacttgtcactctcacaagagtcagaggaggtgaaagagatgagtgaggaagaga
aggagaggagtgaggaagagaaggagaggagtgaggtgtctatacaggatacagagacca
ttcccacccctcctggccccagtggactggttgtgttcggcctgttcatcatgaagcaca
gctatgtcagcgcactcatcatcatgatggtgtggagcatcacctataacagctggctga
cgttcgccctgctggtgtggtcgtgtctgatctggatgatgcgtgaccgtcggcgctatg
ccatgatgagcgctcccttcctggcggtgtacggcaccgtgctgctgctgctcgccttcc
tgagcggcctgaggctgcggcaggacgagctttaccctggcctacctcacgccgtgctgg
tagactttgacatggtcacttacccagtaccctgtgtccacctgggagccaagatgttct
acgcctttagcttcttgcttctgttccgtcaacaactgaaggagaaacaggaagagcagg
atctgaaggagtcagaagagtctctggatgaagtcaaagtgctaccatcggatgaaggtg
acacctcctccataatggagatgctgggttcagcggtcaaaggaaccctggtgaagtact
ggatcctgttctgctgctctacgttctttgtggtcagcttctctgggaaggtgatggtct
acaagatcctctacatcgtgctgttcctcttctgtgttgtcctctatcagatctgttatg
acatgtggaggcgagtgctaaagtacttctgggcggtggtggtgggctactccatggtcg
tcctgatagccatctacatgtaccagtttaagacggtgtctggcctgttcagacagatca
tgggcatgtctgaggaaggtctgcgtgatctggggttggagcagtacgacactgtggagc
tgtttgctcggatcctcctccctgcagccttcctattggcctgtatcctgcagctgcact
atttcaaccaggacttcctggatctcaccgacctggacaacatacctgtccgccagggac
aaaccagagaggaagagctgaggaactcaatcaatgtgatagctgacatgatggcgaagg
agcacagtaagcagatgagtggggagtcaggacgtgtggggagtcagcacacattggaca
gtgatggactgtctgcctcatcagagaagaaaccagaggaggagcaggagggaacaggcc
ccccagaggagcgtctgacccagtgggggttgatagtggaccgggccggcctgctgctgc
tccaggctctggctgtcttccagcgggctcaagagataggctggaggctgctggagctcc
acagcctcaagatcgtctctaccggcatcatctgggtgtccctgcaagaggtgtctctga
tgaacttcctgtttctggtactgtgggcctttgccctgcccttcccccggctccgcccca
tcgcctccagtgtgtcgtcagtctggacctgtgtcatggtggtgtgtaagatgctgtacc
agctcaaggtcatcaaacctctggagtactcctccaactgtaccactgtgagttcactta
ccactagaatgcccaacactgatcaaatactgactaattcattattctagctgctgagga
ggtctgtgctgtatgtgaagcctgttgacccagccatatggtgtggagagctgcgcaagt
gtgaagacaggatactgccctgtctcaggaaccacctgatggtgctggggctgctgatgt
ttgaggtgacggtccatagacaccagctctactatcgcctccgcaacgacctcaaggttc
ccaccttcagcatcatcttccagggcatcacacgccagcacctggaccacggcatcctgc
cctgcatcaaatacttcatcaactacttcttctacaagtttggcctggaggtgtgctttg
tggtggcggtgaatgtgattggccaacggatggacttctacgcgctgctgcactcctgtg
ctctgatagctgttctgtcacgacgacgcaggaaggccatgggggaggtgtggcctaagt
actgctgcttcactgcaggactcatggtgctgcagtacctgctctgtatcggcatccctc
ccgctctctgtgtcgattatccatggagaacctccagtcaggccttgacctccaacctca
tcaagtggctttatctgcctgactttgccatgcgtcctgccccttctttcattttctatg
accacctcctgctcctgtgctcctcgctgcagtggaacatgtttgaggaggagaaccgtg
ccgcggtgcgccttatggcgggggagaacgtggagatcagccgcagcttggacccgcgct
ccttcaaccagtacatccctgtcaacaacttcctccactgcaggtcctacctggacatgg
tcaaggtgtttgttttcagctacttcttctggctggtgctgtgcctcatcttcatcacag
gcaccacccgcatcaacatcttctgcctgggctacctgctagcctgcttctacttcatgt
tgttcgggggcagcctgctcatgcagcccgtacgatacatcctcaggctctgggactggc
tcatcggatacacctgcttcgtcatcggcatgaagaacctgctatctcttggctcatgtg
cttatctggacagcctgttgaagaatggctgctggctcattcaggccttcagcatggtct
gtacaatcaaaggctatgatctccctgctcctgatgatgagtgtgagctgccggaggggg
aggctggcatcgtgtgggatgcgatctgcttcaccgtgctcctagctcagaggagggttt
tcctcagctactacttcctgtatgtggtgtctgacctcagggcctccaagatcctggcct
ccaggggtgctgagctctttgaagccaaagtgaagaaactggttgctgcaagactggaga
tggagaagaagtctgtggagacgctgaagaagcagatggagaagatcaaatccaaacaga
agagtaagcctggccaaggagacgcagcagcgccccctactgatatagtgccaaagggtg
aaattgagaagtcagagaatgatcaggagaaatggtggaaaccatgggtctcacggcctg
gtgttgggaacgactgtggctaccatctatttgagagtgacagtgaagaggaagaggagg
aagtccaggaaaagaaagaggaagaggcaccaccaaagaagaaatctgcttttcagttag
cctatgaggcatgggtcacaagctccaaagcagccctgaatttgcacgaaaaagaggaga
agaggagggcaaagaaacagctgcagagacagcaaggcattgagagggcggagtctagtg
aggatgagttggaggtggaagaggaagaggaagcggaggagaaagaaaatatatttcaga
ggatcatcgactcgctcaagtttttatgggtgtttatcctgtcccttctggatgacctca
ctgagggcctgaactccttctgcaaagatggtctggacatctccaaagtgctacgctttg
aaagggctcttctaggccagcaacagaagaaggggaaagaggtgtcacaggagagcgtga
agcgcttctatgagaattggatgtccagacagaacaccctggcctccctggaagaccagg
aagacatagttccccccgtctcctcccctccacctgtaccatcatcaccacgaggttact
ccaagctgaaacacggccactccaaaatctcctggggtagcagcttgtccagctgcatga
cggatgagaccctgctggggtctcgtcagcccactctggatgagctggatgaccctccta
tactccagcccgctgccgaccaactcagacggaaactactgaagactgcaaacctggacc
ttggctcatttgacaccgaagaccctccaccaagccatgacgatactgttcccaataagg
aggacagtaaagaaggagaggatgcatatgaagaagaggagggggagtataaagaggagg
aggagtatagaatggaggaggaggaatggagggaggaagaagaggaggagagggaaaaag
ctgtgatgctttcaggatccatctccctggactatctggagtgtgatgagaatagcgaag
atttcccagactcccccaggcctctgagtgagaccaggaacctcacggccagcgagctac
tgctcaacaacatgtttggtaacgatgaaatcgaagcgtctgatcagttcttccagtctc
ttccaagacacctgagactggtgtttgccttgtacaacaccatggtgtctaagtcagaga
tgctgtgctactttgtgatcatcctgaaccacatggtgtcagcctcgctgctcagtctga
tcctgcccatccttatcttcctctgggccatgctgtctgtgccacgcccaaccaagcgct
tctggatgactgccatcatctacacagagctgattgtggtggtgaagtattttttccagt
ttggctttttcccctggaccacctcggcctaccgaggcatcaacgcagaccggccctttg
ctctgcccaacatcattggggtggagaagaaagatggctatgttgtctttgacttgatac
aactcctggctctgttcttccatcgctctattctaaagtgccacggtctttgggataaca
aagaggttgagatgccggacttcttcaagaagttaaagaagaagacggagaagaagaaga
tgagtggaggagacaaagcaggggatcagccgaagcgaagactgcccttccttcctctac
aggcctcaactgcatccttgtttcgcagacggggaaaagccaactccactgagacaaacg
atgatatgcagcacaaaaagcgccactcaaagaagaagaggcaccacaataaagtgcccc
tgaccaggaaggagaggatcaagaagctgatccgagaaaggatgctggagactaaagctg
ctatcatagaagttgccctgcacatatacctacctatcaggcagttcttctatgacatca
ttcacccagagtacagcccagtgtgtgatgtctacgctctcatgtttctgattgacgtaa
tcaacttcattgtcatcatatttggatactgggcttttgggaaacacagtgctgctgctg
acatcacagatgctattggggaggaccaggtcccatcggccttcctggtcatgctgctca
tccagtttgggaccatgatagtggaccgtgctctctacctccgcaaaaccctcatgggaa
aatgtgtcttccaagtggtgctggtgtttggtatccacttctggatgtttttcatactcc
ccggggtgactgagaggaggttcaacatgaaccaggtggcacagttgtggtactttgtga
agtgcatctactttggcctctctgcctaccagatcaagtgtggctacccaaatcgtgtgc
tgggaaacttcctgaccaagaactataactacctcaacctattcctctttcaagggttcc
gcctggttccgttcctcatagagctgcgtgccgtgatggactgggtctggactgacacca
ccctcagcctgggcagctggatctgtgtcgaggacatttatgccaacatcttcatactca
agtgctggagggagtcggagaagaaatacccacacaccccagggcagaagaagaaaatgg
tggtgaagtatggaatgggcggcttcatcatattcttcctcatcagcgtcatctggttcc
ccctcctcttcatgtcattggtcaagtcagtggctggggtgaccaatcagcctcttgatg
tctccattcagctcagcatagcaggatatgagccactgttcacaatgagtgcccaggagc
agaacctggtgccatactcacaggccggcctcaaccggctcaccaacctctatgccactc
acccgtcagccatgcagttccttgtgaactacatggccgaggacattgtcattgcaaaga
tcaagagtgatgccagtctgctgtggagcatcagccctgccagccgtgatgctatgatcc
atgaactcagcaactccacccacatctacatcaccctgcgatgggtactactcaggaatg
cgtctctgtcgatgaacgtggagaccgtgggggaacacactgtcaagtatgaggaccggg
ccttgagggaccagatagttcagatgctcaaagggacacacaatgactctgtggtcattg
agtctctcctgcccaagttcatcagaggtcccggaggactggagtccaagatggccaccc
gtctggatgtagaacactcagataggcctgaggacctccagatgttggccttctaccggc
ccctgtccatcaaactacagcgggcagaagacaatggaagtgcagaggggggtcagtggt
ggatggtggaggaatgcactcctggacaggggcacgtccagagcagctgccacagcattg
agatagtagtgttcaacgacaaagtcagcccctccagcctgggtgctctagcaggacagg
gaattgtgggcctgtacatgtctgtggtgctggtcgttggaaagtttgtcagggaattct
tcaacggtatatcccgctccatcatgtttgaggagctgccatgtgtggaccgggtgttga
agctctgcacggacatctttgtggtgcgagagactggtgagatggagctggaggaaacac
tgtttgagaagctaattttcctgtatcgctcgccggagaccatgatcaagatgaccagag
agaagagactagagagcacaattacattttag
DBGET
integrated database retrieval system
