Coregonus clupeaformis (lake whitefish): 121546561
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Entry
121546561 CDS
T08357
Symbol
cdx4
Name
(RefSeq) homeobox protein CDX-4
KO
K09312
homeobox protein CDX1/4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121546561 (cdx4)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
121546561 (cdx4)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
DUF7255
DUF7645
Motif
Other DBs
NCBI-GeneID:
121546561
NCBI-ProteinID:
XP_041713752
LinkDB
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Position
3:complement(25588851..25592160)
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AA seq
271 aa
AA seq
DB search
MHVGYLLDKEGSMYHQGPVRRSGINIPPQNFVSTPQYSDFTGYHHVPNMDTHAQSSGAWG
APYGAPREDWGAYSLGPPNTIPTPMNNSSPGQVSYCSPEYNPMHAPGSAVLQSPPDNISV
AQLSPDRERRNSSYQWMSKTVQSSSTGKTRTKEKYRVVYTDHQRLELEKEFHFNRYITIR
RKSELAGNLGLSERQVKIWFQNRRAKERKLIKKKMGSDGSGGSVHSDPGSVSPQPVPGSL
SPSDIHGSLYPPPGMNTMPSIRNIQQVTVTQ
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtgggataccttttggataaagaaggcagcatgtatcaccaaggacctgtaaga
cgatcgggcatcaacatcccaccacagaactttgtttccacgccacaatattccgacttt
actggataccatcatgtgccaaacatggatacgcacgcacagtcttcgggggcttgggga
gctccttatggcgcaccgagagaggactggggcgcctatagtctggggcctcctaacact
attcctacgcccatgaacaactcctcgccaggacaagtttcctattgctcacctgaatat
aatcccatgcacgcgccagggtcagcagtattgcaatcacctccagataatatttctgtt
gctcaactttccccggatagagaaaggcgcaattcttcttaccagtggatgagcaaaacg
gtacaatcatcttccacgggcaaaacaagaacgaaggagaaatacagagtggtttacacc
gatcaccagagactggaactggagaaggagttccattttaatcgttacatcactatcaga
agaaagtcagaacttgcagggaaccttggcctttcagaacgacaggtgaagatttggttt
caaaatcgcagagccaaggaaaggaaattaatcaaaaagaaaatgggatctgatggcagc
ggaggatcagtgcacagtgaccccggttcagtcagtcctcagccggtaccaggctcactc
agtccgtcggatattcacggctctctctacccaccccccggaatgaacaccatgccatct
attaggaacatacagcaagttactgtcactcagtag
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