Coregonus clupeaformis (lake whitefish): 121546577
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Entry
121546577 CDS
T08357
Name
(RefSeq) putative nuclease HARBI1 isoform X1
KO
K23222
nuclease HARBI1 [EC:3.1.-.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121546577
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Gene silencing
Transposable elements
121546577
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_4
DDE_Tnp_1
Plant_tran
HTH_Tnp_4
Motif
Other DBs
NCBI-GeneID:
121546577
NCBI-ProteinID:
XP_045065428
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Position
30:complement(24701202..24703035)
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AA seq
390 aa
AA seq
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MANRGGRRDVLQTLDDRELLRRYRLDRAGIMFVVDLLRDAITSPTRRHNAITPEKKVITT
LRYLATGKMQQCSSDDLGLSQSSVSRVITQTLTALSQPNIVTQFVSFPLDARTLHTHKRA
FMDIAGFPGVVGVIDGTHVRIIAPSEDEAVFVNRKSFHSINVQIVFNAAWKILDIVAKWP
GSTHDARMLSESGIRQLFERRYVPANCHLLGDSGYPCKPWLLTPYLQPRQGPQLNYNRAH
KTTRAVVERGIGQLKRRFHVLHGEVRLRPEKVSKLIIACAILHNICKVRQIAEPLEDGDE
DEDEDGDNDEDGGEEDIHIPQGNLAQSGLPYRANFTNLHFRQAVAPCHLRTCDGIKNYHS
FTAHHLQLLNARHRTQSLNGLFFRCSILRR
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggccaacagaggaggcaggagagatgtcctgcaaacactggatgacagggaattattg
agacgctacagattggatcgtgcaggaatcatgtttgtggtggatctccttagagatgca
attacttcaccaactcgacgccacaacgctattacaccggagaagaaagtaatcacaacc
ctgaggtatttggcaacagggaaaatgcaacaatgcagcagtgatgacttgggtctgtcc
caatcctccgtcagcagagtcatcacccaaacactgacagctttgtcacaacctaatatt
gtgacacaatttgtttcattcccgctggatgcccgcactttacacacacataaaagggca
tttatggacattgcaggattccctggcgttgtgggtgtaattgatggaacacatgtgaga
ataattgcgccatcagaggacgaggctgtctttgttaacaggaagagtttccacagcatc
aatgtgcaaatagtgttcaatgcggcctggaagattttggacattgtggctaaatggcca
ggctccacacatgatgcgagaatgctctccgagagtggcatcagacagctttttgagaga
cgctatgtgccagctaattgccacttgttaggggacagtggctacccatgcaaaccatgg
ctccttacaccttacctccagccacgccaagggccccaactaaactataacagggcccac
aagacaacaagagcggtggtggagcgtggcataggccagcttaagaggcgctttcatgtt
ctccacggagaggtgcggctgaggcctgaaaaagtcagcaaactcatcatagcctgtgca
atattacacaatatttgcaaggttagacagattgcagaacctctggaggatggcgatgag
gatgaggatgaggatggagacaacgatgaggatggtggtgaagaagatattcacattcca
caggggaacctagcccagagtggactgccttacagggcaaacttcacaaatttacatttc
aggcaagctgtagccccatgtcatttgagaacttgtgatggtattaagaactaccacagt
tttactgcacatcacctgcaactgttaaatgcaagacacagaacacaatctctaaatggt
ttattttttaggtgttcaattttaaggcggtag
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