Coregonus clupeaformis (lake whitefish): 121546584
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Entry
121546584 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger protein 335-like
KO
K24371
zinc finger protein 335
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121546584
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121546584
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_16
zf-C2H2_6
zf-C2H2_7th_ZNF462
zf-C2H2_ZNF462
Actin_micro
Motif
Other DBs
NCBI-GeneID:
121546584
NCBI-ProteinID:
XP_045065326
LinkDB
All DBs
Position
30:complement(31164275..31200830)
Genome browser
AA seq
1985 aa
AA seq
DB search
MEEEIEVESSSDVGPSGSGMEEPSESGMGMESSEAMSADSSDAAAPHASHRHSQHHPGMA
PESDCHVGQSSEGFLVFLPETSSSTDVTHHRATVHLPDSSSVAQLTSVSTVTQSILVSGS
AQVMVHSSVAGSDCGGTMVSDSTASTSSDLGSAIDKIIESTIGPDIMNVCRAVTSAEDGA
AETSEGQYLILQGSDDGSPMVAHTSSLALSSHHRIAIEALGEGPTSTCHDQGDMGGHLDP
DQPDQPSGSHSHYGDQPDQPSGSHSHYGDQDNQLSGSHSHYGDQPDQPSGSHSHYGDQPD
QLSGSHSHYGDQDNQLSGSHSHYGDQPDQPSGSHSHYGDQDNQLSGSHSHYGDQPDQLSG
SHSHYGDQPDQPSGSHSHYGDQPDQLSGSHSHYGDQDNQLSGSHSHYGDQDDQPQHSHAS
QYMECSGGDADAPDQTGESSSSYVDDEEPDETRISSRSLSRSRFPEYGVVDNSDQDLRGY
VECSGSGSGAADSNPSSPGIRRRHTHYVVDCSAGTGAYLECEEDLRPQHSRSCSSSANHS
QSHQTLPNHSQSHQTLPNHSQSHLTLPNHSQSHLTLRQYVESVAADSEQPGCSNYQDQEG
QGEDPDQNQDPDQNQDPDQNQDPDQPQHSDQQQPQHSHNMETTSSSTGPEASLGRYTGAG
EGDEGSSTDHHHPQADIVRSGSDHHHPQADIVRSGSDHHHPQADIVRSGSDHHHPQADIV
RSGSDHHHPQADTVRSGSDHHHPQADTVRSGSDHHHPQADTVRSGSEHHHPQADTAGSAE
HPEAMECTESQHGPYISSSGTYFSHPEPEVDEPPEPQWSPSLGRLSRGEEGGVVGGSGTP
AVEEVAGAVRGPGVPVPVPVPHTMAELGEMMEVVIVQQFKCKMCPYKSVSKNTLINHMRD
RHFKPTGGPPPKKRGRGRSRRSDTLARQQAEVKPEPQPEEPEDDDIVDAGAIDDPEEDSD
YNPADEDCRGRQPAPPPCSSTDRPRRRVGRPRKFTSTEGSYNGKEAEGERANSSVDPQGS
EEASSSGLENGSASLANGKAAEAGISQSDSENKDPSPNGRPEEAEFFPRKRGRPSKRFLR
KKYKKYMNRKCYKSLKPLLRPHSCXICGSRFLSQEDLRFHVDSHQGNDPECFKCLQCNYR
CKRWSSLKEHMFNHQGNKPFKCEVCDYSSVYKKDVNRHSAIHNKDQKTKSESQVYKVLSF
PCPVCHRVYPMQKRLTQHMKTHSAENHTCDKCGKSFKKRYTFKMHLLTHIQSVDNSRVKC
EFCDYDCDNKKLLLNHQLSHNNDRPFKCDYCKYSTSKEDFLVSHLAIKHTGEKPFSCEMC
HFTTKHRKNLRLHVQCRHPEAFEEWSATHLXLLPRQTXRRRPFFTLQQIEDLKQQHDDTP
GLQNTLVAVDPDTLQAMQTMQNASVSQDAMGNTTITYEQAGNSDLSAQNAQDLLLNMSNA
RQLVENCLQVQMLKSSDSEVLEAGSWTGVTSATGGAQKVVTFHVSENGETLVQEVEEVYE
AGTDENGEITQISIQAYEESEGFSVVERMEQATQEMQSTGPGYSSGEGSPQPMEEDQDGT
ETLQENRDSHYYLTSGLGDGILQQVELSSEAPGSPSMVGSPQDQNQLNPKRFSCRICTES
FHGRSDMENHKRAHIDPSTFKCPDCDFTASSWPDVKTHMGVHAYLRPHTCPSCSFASRNR
KDLRRHMMTHTNEKPFTCQICGQRFNRNGHLKFHMERLHSQEPPTRKTHSGGGSQQQTFI
VSSDEEALVMLQYWPLSEMLCFSPLLTISQLFSLCCSPAGRTDHQSTVLSLLQPFRQDRP
SVNCSLSVAALQAGQTISQLFSLCCSPAGRTDHQSTVLSLLQPCRQDRPSVSCSLSVADL
QAGQTISPEQLQQAPGQDHIIVSQEQGLEDQVEATYTQQITTVDGQTLQYITGDNQVQYI
ISQEGVQHLVPQEYVVLSDGNRIQMSDGQIVQYENDGAFLQEQQSQQTVYTDGDTRPSGA
DAAAV
NT seq
5958 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggagatagaggtggagagcagcagtgatgtgggtccatcggggtctgggatg
gaggagccgtcagagagcggtatgggcatggagtcctcggaggccatgtctgcagacagc
agtgatgcagcagccccccatgcatcccaccgtcacagccagcaccaccccggcatggcc
ccagagtcagactgccacgtgggacagagctcagaggggttcctggtgttcctaccagag
actagctccagtacggacgtcacccaccacagggccaccgtccacctcccagactcctcc
tctgtggcccagctcaccagcgtctccactgtaacgcagtccatcctggtgtctgggtca
gcccaggtgatggttcactccagcgtggcggggtcagactgcgggggcacgatggtgtct
gactcgacagcctccacctcctcagatctgggatcagccatagacaagatcatagagtct
accatcggacctgacatcatgaatgtttgtagagcagtgaccagtgcagaggacggagct
gcagagaccagtgaggggcagtatttgatactacaaggatcagatgatgggtctcccatg
gtagcccacacgtcgtccttggccctgtccagccatcaccgcatcgccatcgaggctctg
ggagagggtcctacctcgacctgccacgaccagggagacatgggaggtcacctggaccct
gaccagccagaccagccttctggcagccactctcactatggggaccagccagaccagcct
tctggcagccactctcactatggggaccaggacaaccagctctctggcagccactctcac
tatggggaccagccagaccagccttctggcagccactctcactatggggaccagccagac
cagctctctggcagccactctcactatggggaccaggacaaccagctctctggcagccac
tctcactatggggaccagccagaccagccttctggcagccactctcactatggggaccag
gacaaccagctctctggcagccactctcactatggggaccagccagaccagctctctggc
agccactctcactatggggaccagccagaccagccttctggcagccactctcactatggg
gaccagccagaccagctctctggcagccactctcactatggggaccaggacaaccagctc
tctggcagccactctcactatggggaccaggacgaccagccccagcactcccacgcatca
cagtacatggagtgtagcggtggagacgcagacgcacctgaccagactggagagtcctcg
tcctcgtatgtagacgacgaggaacctgacgagactaggatctcgtcccggtctctctcc
cggtcccgcttcccggagtatggtgtagtcgacaactctgaccaggacctgcgggggtac
gtggagtgtagcggaagtggtagcggagccgccgactccaatccctcgtcccccggcatt
cggcgacgccacactcactatgttgtggactgcagcgcagggacgggggcgtacctggag
tgtgaagaggatttgaggccgcagcactctcggagctgcagcagcagtgctaaccactcc
cagagtcaccaaacccttcctaaccactcccagagtcaccaaacccttcctaaccactcc
cagagtcacctaacccttcctaaccactcccagagtcacctaaccctacggcagtatgtg
gagtctgtggctgcagattcagagcagcccggttgttccaactaccaggatcaggaaggg
caaggggaggatccagaccagaaccaggatccagaccagaaccaggatccagaccagaac
caggatccagaccagccacagcactctgaccagcagcagcctcagcactcccacaacatg
gagaccaccagcagcagtactggcccagaggcctccctggggaggtacactggggcaggg
gagggtgacgagggttcctccacagaccatcaccacccccaggcagacattgtgagatca
ggctcagaccatcaccaccctcaggcagacattgtgagatcaggctcagaccatcaccac
ccccaggcagacattgtgagatcaggctcagaccatcaccacccccaggcagacattgtg
agatcaggctcagaccatcaccacccccaggcagacactgtgagatcaggctcagaccat
caccacccccaggcagacactgtgagatcaggctcagaccatcaccacccccaggcagac
actgtgagatcaggctcagagcatcaccacccccaggcagacactgcaggctcagcagag
catccagaagctatggagtgcacagagagccagcatggcccttacatcagcagcagtggg
acctacttctcccacccggagcctgaggttgatgagccccctgagcctcagtggtccccc
agtctggggaggctttccaggggagaggagggtggcgtggtgggggggtctggaactcca
gccgtggaggaggtggccggggctgttagaggaccaggggtccccgtccccgtccccgtc
ccccacaccatggctgaactgggggagatgatggaggtggtgatcgttcagcagttcaag
tgcaagatgtgcccctacaagagtgtctccaaaaacaccctcatcaaccacatgagggac
aggcacttcaaacccacaggtggcccccctcctaagaagcgtggtcgtggccggtccagg
cgtagtgatacgttggcccgtcagcaggctgaggtgaaaccagagccccagcctgaggag
ccagaggacgatgacatcgtagacgctggggccatcgatgaccctgaagaggacagtgac
tataacccagcagatgaggactgtaggggcagacagcctgcccctcctccctgctcctcc
acagaccgcccccgccgcagggtgggacgccccaggaagttcacctccacagagggcagc
tacaatggcaaggaagctgagggtgagagagctaacagcagtgtggaccctcaaggctcg
gaggaggccagttcctcaggcctggaaaacggatcagcttccttggccaatggaaaagca
gcggaagccggcatcagccagtcagactctgagaacaaagacccgtcacccaatgggagg
ccggaggaggcagagtttttccccaggaaacgaggtcgaccctcaaagcggtttctcaga
aagaaatacaagaagtacatgaaccgcaagtgttataagtctctgaagcccctcctgagg
cctcacagctgttgaatctgcggctctcgcttcctgtcccaggaggacctgaggttccac
gtagactctcaccaaggaaacgacccagagtgcttcaaatgcctgcagtgtaactaccgc
tgcaaacgctggtcctcgctcaaggaacacatgttcaaccaccaggggaacaagcccttt
aagtgtgaggtgtgtgactacagcagtgtgtataagaaggatgtcaacagacactcagca
atacacaacaaggaccagaaaacaaagtctgagtctcaggtgtataaggtgttgtcattc
ccgtgtccagtgtgccacagagtctaccccatgcagaagagactcactcagcacatgaag
acacacagtgctgaaaaccacacgtgtgacaagtgtgggaagtccttcaagaagagatat
acgttcaagatgcatctcctcacacacatccagagtgtggacaacagcagggtcaagtgt
gagttctgtgactatgactgtgacaacaagaagctcctgctcaaccaccagctgtcccac
aacaacgaccggccctttaaatgtgactactgtaaatactccacctctaaagaggacttc
ctggtctcacacctggccatcaaacacacaggagagaagccattctcctgtgagatgtgc
cacttcacgacgaagcaccgtaagaacctgcgtctgcacgtccagtgtcgccacccggag
gcgtttgaggagtggagcgctactcatctctagctcctcccccgtcagacgnnaaggagg
agacccttcttcaccctgcagcagatagaggacctcaaacagcaacacgacgacacaccg
ggcctacagaacactctagtagcagtggatcctgacaccctacaagccatgcagacgatg
cagaacgcctcagtctcccaagatgcaatgggaaacaccaccatcacttacgaacaggcc
gggaactcagacctgtcagcccagaatgctcaggatctgctgttgaatatgagcaacgcc
agacagctggtggagaactgtctacaggtacagatgttgaaatcatcggactccgaggtt
ctagaagcgggctcctggacaggggttacctcagcgaccgggggagcccaaaaggttgtg
acgttccacgtgtctgagaacggggagaccctggtacaagaggtcgaggaggtctatgag
gctgggaccgatgagaatggagagattacccagatatccatccaggcctatgaggagtca
gagggcttcagtgtggtggaacggatggaacaagctacacaggagatgcaaagcaccgga
cctggatacagtagtggtgagggcagtccccagcccatggaagaagaccaggatggaaca
gaaacactccaagagaacagagacagccactactacctgacctctggtctgggggatggc
attctacagcaggtggagctaagcagtgaggcccccggttccccctccatggtgggatcc
ccccaggatcagaaccagctcaaccccaagaggttctcctgtcgtatctgcacggagtcg
ttccacggccgcagtgacatggagaaccacaagagggcccatatcgacccgtccaccttc
aagtgtcctgactgtgacttcactgcctcctcctggccagacgtcaagacccacatgggc
gtgcatgcctacctgagacctcacacgtgtcccagctgcagcttcgcctccaggaacagg
aaggacctgaggaggcacatgatgacgcataccaacgagaagcccttcacctgccagatc
tgtggacagaggtttaatcgtaacggccacctcaagttccatatggagcgcctccacagc
caggagcctccgacgaggaagactcattctggaggaggctcccagcagcagaccttcata
gtcagcagtgatgaggaggctctcgtcatgctacagtattggccattgtctgagatgttg
tgtttctcccctctgttgaccatcagtcagctgttctctctctgttgcagccctgcaggc
aggacagaccatcagtcaactgttctctctctgttgcagcccttcaggcaggacagacca
tcagtcaactgttctctctctgttgcagcccttcaggcaggacagaccatcagtcaactg
ttctctctctgttgcagccctgcaggcaggacagaccatcagtcaactgttctctctctg
ttgcagccctgcaggcaggacagaccatcggtcagctgttctctctctgttgcagacctg
caggcaggacagaccatcagtccggagcagctacagcaggccccgggtcaggaccacatc
atagtgtcccaggaacaaggcctggaagaccaggtggaggccacgtacacccagcagatc
accacggtggacggacagacgttacagtacataacaggagataaccaggtccagtatatc
atctctcaggaaggagtccaacacttagtacctcaggagtacgtggtgctatcagacggg
aaccgcatccagatgtcagatggacagatcgtccagtatgagaatgatggggccttcctg
caggagcaacagtcgcagcagacggtctacacagacggtgacacaagaccatctggagca
gatgcagcagctgtatga
DBGET
integrated database retrieval system
