Coregonus clupeaformis (lake whitefish): 121546640
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Entry
121546640 CDS
T08357
Name
(RefSeq) filamin-A-like
KO
K04437
filamin-A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04510
Focal adhesion
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121546640
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121546640
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121546640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121546640
04147 Exosome [BR:
cclu04147
]
121546640
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
121546640
Intermediate filaments
Intermediate filament-binding proteins
121546640
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121546640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
CH
Y_Y_Y
GBD_IRG7_N
Big_3_5
CFSR
Invasin_D3
Motif
Other DBs
NCBI-GeneID:
121546640
NCBI-ProteinID:
XP_045065588
LinkDB
All DBs
Position
30:complement(50718385..50859102)
Genome browser
AA seq
2543 aa
AA seq
DB search
MSGSHLRQHQSAQPAFNALSPDKDADMPATEKDLAEDAPWKKIQQNTFTRWCNEHLKCVN
KRIANLQTDLGDGLRLIGLLEVLSQKKMFRKYNQRPTFRQMQLENVSVALEFLDKENIKL
VSIDSKAIVDGNLKLILGMVWTLILHYSISMPMWDEEEEGGDGQQKTPKQRLLGWIQNKL
PEIPIHNFSRDWQSGRALGALVDSCAPGLCPDWDQWDQTKPVDNAREAMQQADDWLGIPQ
VITPEEIVDPNVDEHSVMTYLSQFPKSKLKPGAPLRPKLNPKKARAYGPGIEPVGNVVMK
KAVFTVETISAGMGEVLVYVEDPAGHREEAKVTANNDKNRTYSVFYIPKVTGMHKVTVLF
AGLHINKSPYEVDVGMAQGDSSKAAAQGPGLEPSGNIANKTTYFDVYTAGAGVGEVEVVI
MDPAGKKDAVVCQIEDKGNSSYRCSYKPTLEGAHTIYVTFAGGQISKSPFTVNIGEACNP
SLVRAKGRGLQPKGLRVKETADFKVFTKGAGTGELKVSIKGPKGLEEPCKRKDLGDGVFG
FEYYPTPGTYNINITWGGQHIPRSPLEVKVGLEAGPQKVRAWGPGLESGIVGKSADFVVE
AVGENVGTLGFSVEGPSQAKIECDDKGDGSCDVRYWPMEAGEYAVHVLCNNEDIQHSPFM
AEITAAPNKDYYPDKVKAYGPGLQSSGLAVGKPTEFTVDAKLGGKAPLKILAQDGEGTPV
DVQVKDNGNGTYTCSYTPKKPLKHTVMASWGGVNIPDSPFRMTIGAGCHPNKVKVSGPGV
AKTGLKAFEPTSFTVDCAEAGQGDISIGIKCSPGVVGPAEADIDFDIIRNDNDTFTVKYT
PPGAGSYTIMVLFADQTIPMTPIRIKVDPSHDASKVKAEGPGLNRSGVELTKPTHFTVNT
KAAGKAKLDAVFSGPAKGEAVKDVEIINNHDNTHTVKYTPVQQGPLGVAVTYGGDSVPKS
PFSIPVAPSLDLSKIQVDGLGDKITVGKDQEVTVKSKGAGGQGKVAAKVTGPAGKPVTCK
VEAGLKPETSQVKFIPREAGPYQVELTYDGAPIPGSPFKPTAYPPTDATKVKCSGPGLER
AKMGETGEFVVDCTNAGPAELTIEIISDSGTEAEVHIQDNGDGTYTITYIPLCPGSYTLT
IRYGGQDVPNFPARLTVEPAVDASGIRVFGPGVEGKGVFREATTDFTVDARALNQTGGNH
IKTVIQNPSGAVTDAVITDRCDGTYNVEYTPYEEGPHCVKVAYDESPVPNSPFRVAVTEG
CDPGRVRAHGPGLDSGITNKANKFTVETRGAGTGGLGLAVEGPSEAKMSCTDNKDGSCSV
EYVPYEAGTYNLNITYGGQPIAGSPFQVPVSDTVDSSKVKCQGVGLGTNVRANIPQAFTV
DASKAGVAPLQVRVQGPKGVVEPVECVDNGDQTHTVNYIPTREGPYSINVLYADQDIPRS
PYKVKVLPTHDASKVRASGPGLNTTGVPASLPVEFTIDAKDAGEGLLAVQITDPEGKPKK
ASIRDNQDGTYLVSYVPDMTGRYTILIKYGGDEIPYSPFRIRALPTGDASKCTVTVSIGG
HGLGAGVGPTIQIGEQTVITVDAKAAGKGKVTCSVCTPEGVELDVDVVENEDGTFDIFYS
APQPGDYCICVRFGGELIPNSPFQVTALEGAPSDQLLQQQQLPQYFSQQPWATDRPMGMN
GLDVAGLRPFDLVIPFTIQKGEITGDVRMPSGKTAKPDITDNKDGTVTVKYAPTEAGLHE
MDIKYDGIHIPGSPLQFYVDYVNSGNVSAYGPGLIHGTVNKPAVFTVNTKDAGEGGLSLA
IEGPSKADISCVDNQDGTCSVSYLPVLPGDYSILVKYNDKHIPGSPFSARITGDDSMRMS
HLKVGSAADIPLDIGELDLSQLTASLTTPSGREEPCHLKMLRNGHVGISFVPKEIGEHLV
NIKKNGRHIPSSPIAVMISQSEIGDASRVRVTGKGLSEAKTFEPAEFIIDTREAGYGGLS
LSIEGPSKVDINTEDQEEGTCKVSYCPTEPGNYIINIKFADQHVPGSAFTVKVTGEGRMK
ESITRKKRAASVANVGSQCDLSLKIPEISIADMMAQVTSPSGQVHKADIMEGENNTYCIR
FVPTETGVHTVCVKYAGVHVPGSPFQFTVGPLGEGGAHKVRAGGPGLERAEAGVPAEFSI
WTREAGAGGLSIAVEGPSKAEITFEDRKDGSSGVSYMVQESGDYEVSIRFNDEHIPDSPF
VVPVASPSDDARRLTVASLQESGLKVNHPASFAVSLNGAKGQIDAKVHSPSGALEGCCVT
ELDQDKYAVRFIPRENGLYLIDVKFNGSHIPGSPFKIRVGETGQAGDPGMVTAYGAGLEG
GTTGTACEFVVNTSTAGPGALAVTIDGPSKVKMDCVECPEGYKVTYTPMAPGNYLISIRY
GGPYHIVGSPFKAKITGSKLVSSHSNHETSSVMVDPVTRQVSSSHQGAPSQTDASCVTAK
GLGLSKGFIGQKNNFTVDCSKAGRNMLLVGVDGPRVPCEEVLVKHVGNRIYNISYQLKEK
GEYILVVKWGEQHIPGSPYHITV
NT seq
7632 nt
NT seq
+upstream
nt +downstream
nt
atgagtggttcccacctccgccagcaccagtcggcccagcctgcattcaacgccctttcc
ccggacaaagacgcagacatgcccgctacagagaaggacctcgccgaggacgcgccgtgg
aagaagatccaacagaacacgttcacccgctggtgtaacgagcatctgaaatgcgtcaac
aaacggatcgccaatctccagacggacctgggtgacgggctgcggctgatcggactcctc
gaggtgttgagccagaagaagatgttcaggaaatacaaccagcggcccaccttccgacag
atgcagctcgagaacgtctcggtggcgctcgagttcctagacaaggagaacatcaagctg
gtgtctatagactccaaggccatagtggatggtaacctgaagctgatcctaggcatggtg
tggactctgatcctccactactccatctccatgcccatgtgggacgaggaggaggagggg
ggcgacggccagcagaagaccccgaaacagaggcttctgggatggatccagaacaagtta
ccagagatccccatccacaacttcagcagagactggcagagtggcagagcactgggggca
ctggtcgacagctgtgctccgggcctatgccctgattgggaccagtgggatcagactaaa
ccagtggacaacgcccgtgaggccatgcagcaggctgacgactggctggggatccctcag
gtgataaccccagaggagattgttgaccccaatgtagatgaacattccgtgatgacctac
ctgtcccagttccccaagtccaaactgaagcctggcgcacccctccgccccaaactgaac
cccaagaaggcccgtgcatacggaccaggtatagagccagtaggtaacgttgtgatgaag
aaggcggtgtttacagtggagaccatcagtgctgggatgggagaggtcctggtgtatgta
gaggaccctgctggacacagagaggaggccaaggtgacagccaacaacgataagaatcgt
acctactccgtgttctacattcccaaagtcactgggatgcacaaggtgacggtgctgttt
gcgggtctacacatcaataagtctccttatgaggtggatgtggggatggctcagggagac
agcagtaaggctgcagcccagggaccaggactagaaccttccgggaacatcgccaacaag
accacatactttgacgtctacactgcaggtgctggtgtgggagaggtggaggtggtgatc
atggacccagcgggtaagaaggacgcggtggtgtgtcagatcgaggataagggcaacagt
tcgtaccgctgcagctacaagcccaccctggagggggcacacaccatctacgttaccttc
gctggaggacagatcagcaagagccccttcactgtcaacataggagaggcgtgtaacccc
agcctggttcgggctaaggggcgtggtctgcagcctaaaggcctccgggtgaaggagaca
gctgacttcaaagtcttcactaaaggagctgggactggagaactcaaagtcagcatcaag
ggccccaagggtctggaggagccttgtaagagaaaggatctaggagatggtgtgtttggg
tttgaatactaccccactcctggaacatacaatattaacatcacctggggaggacaacac
atcccccgcagtccgttggaggtgaaggttggtttggaggcggggccacagaaggtgcga
gcctgggggcccggcctggagagcggcattgtgggtaaatctgccgacttcgtggtcgaa
gctgtcggagagaatgtgggaacactgggtttctcggtggaggggccgtcccaggcgaag
atagagtgtgacgataagggcgacgggtcatgtgacgtgcggtactggccaatggaagca
ggggaatatgcggtgcatgtgctctgtaacaacgaggacatccagcactctcccttcatg
gctgaaatcactgctgctccaaacaaggactactaccctgataaggtgaaggcgtatggt
ccaggtctacagagcagtggtctggctgtggggaaaccgactgagttcaccgtcgacgcc
aagctgggagggaaagcacctctcaagatcctggcacaggatggtgagggcaccccagta
gatgttcaggtgaaggataacggtaatggaacgtacacctgcagttacacccccaagaaa
cccctcaaacacaccgtcatggcgtcctggggcggagtcaacataccggacagtcctttc
aggatgactatcggggcaggctgccaccctaacaaggtgaaggtgtcaggtcctggtgta
gctaaaacgggtctgaaggcctttgaaccaacatctttcactgtggactgtgctgaggca
ggacaaggggacatcagtataggtataaagtgctctccaggtgtggtgggaccggcagag
gcagacatcgacttcgacatcatcagaaacgacaacgacacgtttaccgttaaatacacc
ccgccaggtgctggtagttacaccatcatggtgctgttcgctgaccagaccatccccatg
actcccatcaggatcaaagttgacccgtcacacgacgccagcaaggtcaaggctgaggga
ccaggactcaaccgcagtggtgtggagttgaccaagccgacccacttcacagtaaacacc
aaggctgcaggtaaagccaagctggacgctgtgttctccggcccggctaaaggagaggca
gttaaggacgttgagatcatcaacaaccacgacaacacccacacggtcaagtacaccccc
gtccagcagggccctctgggagtggccgtcacctacggaggagattctgttcccaagagt
cccttctccatccctgtggcgccaagccttgacctcagcaagatacaagtggatggactg
ggagacaagataacggtgggtaaggaccaggaagtgaccgtgaagtccaagggagcagga
ggtcaggggaaggtggcggctaaggttacagggcccgctgggaaaccggtcacctgcaag
gtggaagcggggcttaaaccagagaccagtcaggtgaagtttatccctcgagaagcgggg
ccataccaggtggagctgacctatgacggcgctccgatcccaggatcccctttcaaaccc
accgcctacccccccactgatgccaccaaggtgaagtgttctggcccagggttggagcgt
gccaagatgggagagacaggggagtttgtggtggactgtaccaacgcgggtccggctgag
ctgaccatagagatcatcagtgacagcgggacagaggcagaggtccacatccaggacaat
ggagacggaacctacaccatcacctacatccccctgtgccccggctcatacaccctcacc
atccgctatggggggcaggatgtacccaacttccccgcccgcctcaccgtggagccggcc
gtcgacgccagcggaatccgcgtgttcggaccgggagtggagggcaaaggcgtgttccgc
gaggcgaccacagacttcacggtagacgcccgagctctgaaccagacgggagggaaccac
atcaagacagtgatccagaacccatctggagccgttaccgacgctgtcatcaccgaccgc
tgtgacggaacctacaacgtagagtacactccctacgaagagggtccccactgtgtaaag
gtggcgtatgatgagtctccggttcccaatagtccgttccgtgtggccgtgacggagggt
tgcgacccggggcgggtacgtgcacatggaccaggcttggacagtggcatcaccaacaaa
gccaacaagttcaccgtggagacccgtggtgcgggtacaggaggactgggtctggctgta
gagggcccatcggaggcgaagatgtcctgcaccgacaacaaagatggcagctgcagcgtg
gagtacgttccctacgaggctggaacatataacctcaacatcacctacggaggacagccc
attgctggcagtccattccaggttcctgtcagcgacactgtggacagttctaaggtgaag
tgccaaggggtggggcttggaaccaacgtgcgtgccaacattccacaggccttcaccgtg
gacgcctctaaagcaggagtcgcccctctgcaagtccgagtacaaggacccaaaggtgtg
gtggagccagtagagtgtgtagataatggagaccagactcacacagtgaactacatcccc
accagagagggaccttactctatcaacgtactgtacgctgaccaagacatcccacgcagt
ccctacaaggtgaaggtgttgcctacccatgatgccagtaaggtgcgggccagcggcccc
ggtctcaacaccaccggagtgcccgcctctctgcccgtcgagttcaccatcgacgccaag
gatgcaggagaggggctgcttgccgtgcagatcactgaccctgaggggaagcctaagaag
gccagtatccgtgacaaccaggacgggacctacctggtgtcgtatgtacctgacatgact
ggtcgttacaccatcctgattaaatatggaggggatgagatcccctactcccccttccgc
atcagggctctacctactggagacgccagcaagtgtactgtcacagtgtcaatcggcggc
cacggcctgggagccggtgtgggtccaaccatccagatcggagagcagactgtcatcact
gtggatgcaaaggctgctgggaaaggaaaggtgacgtgcagtgtgtgtaccccagaaggg
gtggagttagatgtagatgtggtggagaatgaggatggaacctttgatatcttctactcc
gccccccagcctggagattactgcatctgtgttcgctttggaggggaactcatccccaac
agccccttccaggtcacggcattggaaggagccccctcagatcagctcctccaacagcaa
caactaccacagtacttcagtcaacaaccctgggcaacagaccggccaatgggaatgaac
ggtttggacgtggcgggactccggccgtttgacctggttatccccttcaccatccaaaaa
ggagagatcacaggcgatgtacgcatgccgtcaggtaaaacagccaagccagacatcaca
gacaataaggacgggacggtaacggttaaatacgctccaactgaggccggcctgcacgag
atggacatcaaatacgacgggatacacatccctggtagtcccctccagttctatgtggac
tatgtgaacagtgggaacgtcagtgcgtacggaccgggcctgatccacgggaccgtcaac
aaacctgccgtcttcaccgtcaacaccaaggacgcaggagagggtggtctgtctctggcc
atcgagggtccgtctaaagccgacatcagctgtgtggataaccaggatggaacctgttcc
gtatcctacctgcctgttttacctggagactacagcatcctggtcaaatacaatgacaaa
cacatcccaggcagccccttctcagcccgcatcacaggtgatgactctatgaggatgtcc
catctgaaggtgggctctgctgctgacatcccattggacatcggcgagctggacctgagt
cagcttacagcctctctgaccacgccctccggccgagaggaaccctgccacctcaagatg
ctccgcaacggacacgtcggcatctcgtttgttcccaaggagatcggggagcacctggtg
aacatcaagaagaacggacgccatattcccagcagccccatcgccgtgatgatcagccaa
tcggagatcggcgacgccagccgggtgcgtgtgactggcaagggcctcagcgaggccaaa
acctttgaacccgctgagttcatcatcgacacacgcgaagcaggctatgggggtctgagt
ctgtccatcgagggccccagtaaggtggacattaacactgaggaccaggaggaagggacc
tgtaaggtcagctactgccctactgaaccaggaaactacatcatcaacatcaagttcgcc
gaccaacacgtaccagggagtgcgttcacggtgaaggtgaccggagaagggaggatgaag
gagagcatcaccagaaagaagagggcagcgtccgtcgctaacgtgggcagccagtgtgac
ctcagcctcaagataccagagatcagcatagcagacatgatggcccaggtgaccagtccg
tctggccaggttcacaaggctgacatcatggagggagagaacaacacctactgcatccgc
tttgttcccacggagaccggcgtgcacacggtgtgtgtgaagtacgcgggcgtgcacgtg
cccggcagccccttccagttcacagtggggccccttggagaaggaggagcccacaaggtc
cgcgctggggggcccgggctggagagggcagaggctggagtaccagctgagttcagtatc
tggacgcgggaggcgggtgcagggggtctcagcatcgcggtggaggggcccagtaaagca
gagatcaccttcgaggaccggaaggacggatccagtggagtatcctacatggtccaggag
tcaggagactatgaggtgtctatccgtttcaacgacgagcacatccctgacagtcccttc
gtggttcctgtggcgtcgccctctgatgacgccagacgactcactgttgccagtcttcag
gagtccgggttgaaggtcaatcacccagcatcctttgctgtgagcctgaatggagcgaag
ggacagatcgatgctaaagtccacagcccatctggagccctggagggctgctgcgttact
gagctagaccaagataagtatgctgtgcgattcattcccagagagaacggtctgtacctg
atcgatgtgaagttcaacggcagccacatccccggcagccccttcaagatccgggtgggg
gagacaggacaggctggagacccaggcatggtgaccgcatacggagctggattagaggga
ggaaccactggtacagcctgtgagtttgtggtgaacaccagtacggcggggcccggggcc
ctggcggtgaccatcgacggcccatccaaggtgaagatggactgtgttgagtgtccggag
ggttacaaggtgacctacacccccatggctccaggaaactacttaatctccatcagatac
ggaggaccttaccacatcgtaggatcccccttcaaggccaagatcaccggctccaagctg
gtcagtagccatagtaaccacgagacgtccagcgtcatggtcgaccctgtgactcgccag
gttagctcttcccaccagggagctcccagccaaacggacgccagctgtgtgacagccaag
ggtctcggcctatcaaagggctttatcggccagaagaacaacttcaccgtcgactgcagc
aaagcaggtcgtaacatgctgttggtgggtgttgacgggcccagggttccctgtgaggag
gttctggtgaagcacgttgggaaccgtatctataacatcagctaccagctcaaggagaag
ggagagtacatcctggtagtgaagtggggagaacagcacatccctggcagcccctaccac
atcactgtctag
DBGET
integrated database retrieval system