Coregonus clupeaformis (lake whitefish): 121546723
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Entry
121546723 CDS
T08357
Name
(RefSeq) acidic mammalian chitinase isoform X1
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00520
Amino sugar and nucleotide sugar metabolism
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
121546723
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
121546723
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Gene cluster
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Motif
Pfam:
Glyco_hydro_18
Motif
Other DBs
NCBI-GeneID:
121546723
NCBI-ProteinID:
XP_041713893
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Position
30:complement(19043048..19046552)
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AA seq
440 aa
AA seq
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MNVAAVFVWFGLVVTKAICTREEYRLVCYVNSRTQHHPDMPAFSLDMADPFLCTHIIMAY
MNLDQDYHITPFTQEDRTLCSSINMLKERNPDLKTLLSVGGWNFTDTRLLKMSSDNTTRK
TFVQSALKHLRQEGFDGLDVVWQPPSASNGAQGGKHLFTHLLKELRGGIQEEARVSGIET
LLLTTAVSGLVDYAREAYDAQSFPQYVDFISLVTADLHGPLEGMSGHISPLFSLKHPAMD
TSQRENQVQYWLSQGVVSQKLTLGFPAYSPVTQILGNEINYDKEDTELQEDAAEYTETDT
AVRVMAYYEVCQFLRIGAVVKFDKREKLIQAHEYDHWLNFEYIHILREKMRALQRQELGG
AMVWSLDLDDFTGTLCGKGSFPFTRLLKASLLRDKGPRHHKRRHHYHHRHPHRHGGFLSH
DSHHPGYHVHCHRHLDRHNT
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtggcagcagtttttgtttggttcggcctggtggtcactaaagccatttgtact
cgggaagagtaccgactggtgtgctatgtgaacagcaggacccagcaccatcctgacatg
cctgctttcagcctggacatggctgacccgttcctctgcacccatatcatcatggcctac
atgaacctggaccaggactatcacatcacacccttcacacaggaggacaggaccctctgc
agctccatcaacatgctcaaagagaggaacccagatctgaaaactctgctttctgttggg
ggatggaactttactgacaccaggctcctaaagatgtcctctgacaacaccacgaggaag
acgtttgtccagtctgctctgaaacacctgaggcaggagggctttgatggactggatgtg
gtgtggcaacctccctctgcttctaatggagcacaggggggaaaacatctatttactcat
ctgctcaaggagctgcgtggaggaattcaggaggaggctcgtgtctcagggattgagact
ctgctcctcaccacagcagtgtcgggcctggtggactatgccagagaggcctacgatgca
cagtcctttccccagtatgttgacttcatctccttggtgaccgctgacctccatgggcca
ctggagggaatgtcaggtcacatcagtccattgttcagcctgaagcatccagctatggac
acatctcagagagaaaaccaagtgcagtactggctctctcagggagtggtttcccagaag
ctgactctggggttccctgcttactcacctgtaacccagatcctggggaacgagataaat
tatgacaaggaagatacagagctacaagaggatgcagcggaatatactgagactgatacc
gctgtacgtgttatggcttactatgaggtgtgtcagttcctcagaattggggcggtggtg
aagtttgataagagggagaagctgatccaggcacatgaatatgatcactggcttaacttt
gaatatatacatatcctgagggagaagatgagagcgctgcagcgtcaggagctgggtgga
gccatggtgtggtctctggatcttgacgacttcacagggacgctgtgtggcaaaggtagc
ttcccgttcaccaggctgctcaaagcatctcttctcagggataaggggccacgacatcat
aaacgacgccaccattatcaccatcgccatccacatcgtcatgggggtttcctttcccat
gacagccatcacccaggttaccatgtccattgtcaccgtcaccttgaccgccacaacact
taa
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