Coregonus clupeaformis (lake whitefish): 121546757
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Entry
121546757 CDS
T08357
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX3
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121546757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121546757
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121546757
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121546757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-RING_10
zf-RING_5
zf-rbx1
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
121546757
NCBI-ProteinID:
XP_041713930
LinkDB
All DBs
Position
30:12246725..12248823
Genome browser
AA seq
212 aa
AA seq
DB search
MTSSRFSNIGDRCTSATEQRLGRDEEDYCIICMDCFQKKRTLRCSHSFCSSCIDSVFQIK
PACPVCNTFHGTYEGTQPRDGIMTVRRNWQCLPGYEEGNGHIAIDYHFTDGVQGPEHPNP
GEKYSSTSRTAFLPACEEGEKVLRLLQTAFHRRLIFTIGTSATTGLNNSITWNDIHHKTN
IGGGPQFFGYPDPGYLSRVQEELRLKGVTEES
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgacatcatctcgattctccaacataggcgatagatgtacttctgcaacagagcagaga
ctcggccgcgacgaggaggactattgcataatatgcatggactgttttcagaaaaagaga
actttaagatgttctcactcattctgttcaagttgtattgactcggttttccaaattaag
cccgcatgtccggtatgtaatacttttcacgggacctacgaaggaacgcagccccgggac
gggatcatgacagtgagacgcaactggcagtgtttacctggctatgaggaggggaatgga
catatcgcgattgattatcactttacagacggagtacaagggcctgagcatccgaacccg
ggtgagaagtactccagcacgtccaggacagcctttctgccagcctgtgaggagggagag
aaagtactgaggctgctccagacagccttccacaggaggctcatcttcaccatcgggaca
tcagccaccaccggcctcaacaactccatcacatggaacgacatacaccacaagaccaac
attgggggaggaccacagttttttgggtatccagacccgggctacctctccagggtccag
gaggagcttcgtctgaagggagtgacagaggagagctga
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