Coregonus clupeaformis (lake whitefish): 121546783
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Entry
121546783 CDS
T08357
Name
(RefSeq) transcription initiation factor TFIID subunit 10 isoform X1
KO
K03134
transcription initiation factor TFIID subunit 10
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121546783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121546783
03036 Chromosome and associated proteins [BR:
cclu03036
]
121546783
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121546783
Coactivators
SAGA/TFTC/STAGA complex
121546783
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
121546783
STAGA complex
121546783
TFTC complex
121546783
SAGA complex
121546783
SLIK complex
121546783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF10
Bromo_TP
Motif
Other DBs
NCBI-GeneID:
121546783
NCBI-ProteinID:
XP_041713953
LinkDB
All DBs
Position
30:8466388..8468789
Genome browser
AA seq
185 aa
AA seq
DB search
MNVDTPQPVITGVFSNSSTSSNCLTNNIASTNVSSIASVAIGNSPTSAAMATPSDTSVSN
GVYVPSGIANGDVKPVITTTPLADFLMQLEDYTPTIPDAVTGYYLNRAGFEASDPRIIRL
VSLAAQKFISDIANDALQHCKMKGTASGSSRNKTKHDKKYTLTMEDLSPALSEYGINVKK
PHYFT
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttgatactccacagccagtcataacaggggtcttttcaaattcctcgacatcc
agtaattgcctcactaacaacattgcatcaactaacgtcagcagcatcgcctcggttgcc
ataggtaattccccaacctcagctgccatggccacaccatctgacacatccgtgtccaac
ggcgtctatgtgcctagtggcattgccaacggcgatgtgaagcctgtaatcacaaccaca
ccactggctgactttctcatgcaattggaggactacactcctacaatacctgatgcagtg
acaggctactatctcaaccgggccggctttgaggcgtctgatccgcgaataatccgtctg
gtctccctcgcggctcagaagttcatctcagacatcgctaacgatgccctgcagcactgt
aaaatgaagggaactgcctcggggagctccaggaacaagacaaagcatgacaagaagtac
acattgaccatggaggacctctcccctgccctttctgagtatggcatcaacgtaaagaaa
cctcattacttcacatag
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