Coregonus clupeaformis (lake whitefish): 121547012
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Entry
121547012 CDS
T08357
Name
(RefSeq) homeobox protein SIX3-like
KO
K19473
homeobox protein SIX3/6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121547012
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
121547012
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
YdaS_toxin
Motif
Other DBs
NCBI-GeneID:
121547012
NCBI-ProteinID:
XP_045065869
LinkDB
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Position
31:28135731..28136729
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AA seq
222 aa
AA seq
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MVFRSPLELFHAHLFLPGTLLPEEPPTCAPASALPGLCFYAAQVASVCETLEEIGDVERL
ARFLWSLQVVPGGACSIAEHESVRSAYAVVAFHTGNYRELYCILEKHSFTHCASQGKIQA
MLLYAHYGEAERLRVRSQGPLDKYRVRKKIPLPRTIWDGERKTHCFKERTRGLLREWYLQ
DPYPDPAMKRELARAIGLTPTQVGNWSETERPRPPTRTGHCH
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcaggtcgccgctcgagctctttcacgcccatctcttcctgcccggcacgctc
ttaccggaggagcctcccacgtgtgcacctgcctctgctctcccggggctctgcttctac
gcagcgcaggtggccagtgtgtgtgagactctggaggagatcggggacgtcgagcggctt
gcgcggttcctgtggtccctgcaggtggtcccaggtggcgcgtgctccatcgccgagcat
gaatcagtccgtagtgcgtatgctgtggtcgcctttcacaccgggaactaccgcgagctc
tattgcatcctggagaaacacagctttacgcactgcgcctcgcaaggtaagatacaggcc
atgttgctctatgcgcattacggggaggctgagaggctgcgcgtgcggtcgcagggcccg
ctggacaagtaccgtgtaaggaagaagatcccgttaccaagaacgatctgggatggcgag
aggaagacacactgcttcaaggagcggacgcggggcctgctgagggaatggtacctccag
gacccctacccagaccccgcgatgaaacgggagctggcgcgcgccatcgggctcactcca
actcaggtcggaaactggtcggagacagagagaccacggccgccaacaagaacaggtcat
tgtcattaa
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