Coregonus clupeaformis (lake whitefish): 121547058
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Entry
121547058 CDS
T08357
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121547058
Membrane trafficking [BR:
cclu04131
]
Protein recycling
Others
Retriever complex
121547058
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Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
121547058
NCBI-ProteinID:
XP_041714086
LinkDB
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Position
31:complement(5937053..5951193)
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AA seq
968 aa
AA seq
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MAAVQWHSRARRYEAELQSCGLEVAPVEFGDYHPLKSITVTDSKSRRGARKGSTSSSSSS
SSSVAPDPLSSMLDGMDPLSMFAAASASEPPLTLSQSSSTGDFGRGKRKEKEDEVGVDFE
PWSSKRGEILARFTTTEKLSINLFMGSDKGKAPSPASSAVSEKVRTRLEELDDLEEGSQR
ELLNLSQQDYVNRIEELNQSLKEAWASDQKVKALKIVIQCSKLLSDTAVIQFYPSKFVLI
TDILDTFGLLVYERIWSMCSDPRPLPDSFTADEVHDTAKETCLNWFFKIASIRELIPRLY
VEVALLKCNRFLTKCGIQETVPRLTAMIRGIGDPLVAVYARAYLCRIGMEVAPHLKDSLN
KNFFDLLGTFRQIHGDSVQNQLVLQRVEIPVYLTLYSPAIHWILQCVSYRAPEALLTEMM
ERCKKLGNNALLLNSVMWAFRAEFIATRATDFIGMIKDCDEAGFPKHLLFGSLGRSLACA
DPPEAERLPILNEAWKVITKVRSPQDYINCAEIWVEFTCRHFTKREVNTVLSDIIKHMTP
DRAFEDAYPQLQSVIRKILTYFHDFSVLFSMERFLPFMDMFQKDSVRVEVCRSIMDVFIK
HQQEPTRDPVILNALLHVCKTMHDSVNALTLEDEKRSLALLINGFIRMVSFGRDFEQQLS
FCVEARATFCNLEPVLVQLIHTVNQLAMETRRVMRGSHSRKTAAFVRACAAYSFITIPSL
TSIFSRLNLYLLSGQVALANQCLSQADAFLKAAVSVLPEVPRSVSIEGKLRSSECFLLDF
INNFLSALLVVPDHPEAGVLYLVRGLLNMVQDYTWEDNSDAKVQVYISALPLLAAMSQET
YLYSIPKVDSNETLYGGDPKFVAEINKLCETLIGQVLDHLKSLGRDESVRRQGSLAFSLF
GCLLAHGDLRNNKLNQLAVNLWNLSHKQGYCDTRTAVRTLEFIKHQAQQPDMAHLSDMLQ
RLTLQSRT
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgtgcagtggcactctcgtgcacgcaggtatgaggctgaactgcagagctgt
ggcttggaggtcgccccagtggagtttggtgactaccatcccctcaagtccatcactgtg
acagactccaagtcgcggaggggagcgcgtaaaggcagcacctcctcctcttcctcctcc
tccagctctgtggcaccggatcccctgagctccatgctggatggaatggaccccctgtcc
atgtttgctgcagcctccgccagcgagccccccctaaccctctcacagagcagctccact
ggggactttggtagagggaagaggaaggagaaggaggatgaggttggagtggactttgag
ccgtggtcatccaaacggggagaaatcctggccaggtttactaccactgagaagctttcc
attaatctcttcatgggctcagataaaggcaaggctcccagtcctgcctcctctgctgta
tcggagaaggtgcgaactcgcctagaggagctggatgatctggaagaggggtctcagcgg
gagctgctgaatctgtcccagcaggactatgtgaaccgtattgaggagctcaaccagtct
ctaaaagaggcctgggcctccgaccagaaggtcaaggccctcaagatcgtcatccagtgc
tccaagctgctgtcagacacagctgtgattcagttctaccccagcaagtttgtcctcatc
acagacattctggacacctttggacttctggtgtatgagaggatctggtccatgtgttct
gaccctcgccccctaccagactcctttacagctgatgaagtgcatgacacggccaaggag
acctgcctgaactggttcttcaaaatcgcctccatcagagaactcatcccacgactatat
gtagaggtagctctcctgaagtgtaaccgtttcttgaccaagtgtgggatccaggagacg
gtgcctcgcctcacagctatgatccgggggataggggaccccctggtggccgtgtatgcc
cgggcctacctctgtaggattgggatggaggtggctcctcacctgaaggacagcctgaac
aagaacttctttgacctgctggggacgttccgtcagatccacggcgacagtgtccagaac
cagctggtcctgcagagggtggagatccctgtctacctgaccctctactcccccgccatc
cactggatcctgcagtgtgtctcctacagagcaccagaggccctgctaacagagatgatg
gagaggtgcaaaaagcttgggaataatgccctgctgctgaactcggtgatgtgggcgttc
agggcggagtttatcgcgacgagagccaccgacttcatcggcatgatcaaggactgtgat
gaggcaggattccctaagcacctgttgtttggctctctgggccgcagtctggcctgtgct
gaccctcctgaggcagaaaggctgcccatcctcaacgaggcctggaaggtcatcaccaaa
gtgcgcagtccacaggattacatcaactgtgctgagatctgggtggagttcacctgtcgt
cacttcactaaacgtgaggtcaacactgtgctctctgacatcatcaagcacatgaccccg
gaccgggcctttgaagatgcctatccgcagcttcagtccgtgataaggaagatcctcacc
tactttcatgacttctctgtcctcttctccatggagcgtttccttcctttcatggacatg
ttccagaaggacagcgtcagggtggaggtgtgtcgctctatcatggacgtcttcatcaaa
caccagcaagagcccactagagaccctgtcatcctcaatgctctactccacgtctgcaag
accatgcacgactctgtcaatgctctgactctggaggatgagaagagatctctggcctta
ttgatcaatggcttcatacgcatggtgtcgtttggccgtgactttgagcagcagctgagt
ttctgtgtggaggcccgggccaccttctgtaacctggagccagtgctggtgcagctcatc
catactgtgaaccagctggccatggagacaaggcgtgtgatgagggggagccactcccgc
aagactgctgcttttgtcagggcatgtgctgcatacagcttcatcaccattccctccctc
accagcatcttcagccgcctcaacctctacctgctgtctgggcaggtggccctggccaac
cagtgtctttcccaggcggatgcattcctgaaggcagcggtcagtgtgttgccagaggtg
ccacgcagtgtcagtatcgagggcaaactgcgctcttctgagtgcttcctgcttgacttc
atcaacaacttcctgtcagcactactagttgtgccggaccacccagaggcaggggtgttg
tacctggtgcgtgggctgctcaacatggtacaggactacacctgggaggacaacagtgac
gccaaggtccaagtctacatcagcgccctgccactactggctgccatgagtcaggagacc
tacctctactccatccccaaagtggactctaatgaaacactttatggaggagatcccaag
tttgtggcagagatcaacaagttatgtgaaactctgattggacaagtgctggaccatctc
aagagcttgggtagagatgagagtgttcgtagacagggtagtctggccttctccctgttt
ggttgcctcctggctcatggggacctacgcaacaacaaactcaaccagctggctgtcaac
ctgtggaatctgagccacaaacagggctactgcgacacacgcaccgccgtgcggacgcta
gagttcatcaagcaccaggcccagcagccagacatggctcacctctcagacatgcttcaa
cgcctcacactgcagtccaggacctga
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