Coregonus clupeaformis (lake whitefish): 121547089
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Entry
121547089 CDS
T08357
Symbol
rnf4
Name
(RefSeq) RING finger protein 4
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121547089 (rnf4)
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121547089 (rnf4)
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121547089 (rnf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_5
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_4
zf-rbx1
RING_XB3-XBAT31
Prok-RING_4
zf_RING_Vps8
Rtf2
zf-C3HC4_4
zf-UDP
zf-RING_6
TerY_C
DZR
Motif
Other DBs
NCBI-GeneID:
121547089
NCBI-ProteinID:
XP_041714131
LinkDB
All DBs
Position
3:36869795..36872933
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AA seq
192 aa
AA seq
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MSSTTQRKRRTGAPSSSRRTAKSIRVTDTSVRPRAAASAAATETIDVLESSRTSSEEVVD
LTCEGSESTVVDLTNNDSVVVVDEGPQGRHGADSESYVLSSDEEEDTNGGLSADLLSSLQ
ASSRARSTPGTVSCPVCMDTHAEIIESGRLVVSTKCGHLFCSQCLRDSLLRSHTCPTCRK
KLTQKQCHPIYI
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtacaacacagaggaaaagaaggactggagccccctcaagttccagacgcacg
gccaagagtatcagagtcaccgacaccagtgtgcgacctcgtgctgcagcatcagcagca
gccacagagaccattgatgtgctggagagcagcaggactagcagtgaggaggtggtggac
ttgacatgtgaaggttctgaatcgactgtggttgacttgaccaacaatgattctgtggtg
gttgtcgatgaagggcctcagggcagacatggagctgacagtgagagttacgtactgagc
agtgatgaggaggaggatactaatgggggcctcagtgccgacctcctgtcctctctacag
gccagcagtagagccaggtctactccagggacagtcagctgcccagtgtgtatggacacc
catgctgagatcattgaaagtgggagactagtagtctccacaaaatgtggtcacctattc
tgcagtcagtgcctccgcgactcgctgttgagatcccacacttgtccaacctgtagaaag
aaactgacccaaaaacaatgtcaccccatatacatctga
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