Coregonus clupeaformis (lake whitefish): 121547098
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Entry
121547098 CDS
T08357
Name
(RefSeq) exportin-5
KO
K14289
exportin-5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121547098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cclu03016
]
121547098
03036 Chromosome and associated proteins [BR:
cclu03036
]
121547098
Transfer RNA biogenesis [BR:
cclu03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
121547098
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
121547098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
121547098
NCBI-ProteinID:
XP_041714140
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Position
31:complement(36115558..36139341)
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AA seq
1224 aa
AA seq
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MGEPVSEMCDHLIKAVNVMMDAESSQIYRLEALKFCEEFKEKCPFCVPCGLQLADKAQTA
VVRHFGLQILEHVIKFRWNNMPQQEKVQLKNCAMGLLSTGTYPILEEESHIKDVLARIIV
EMIKREWPQHWPDMLKEMEALTSIGEAQTELVMLILLRLAEDVITFQTLPTQRRRDIQQT
LTQNMESIFSFLLTILQLHVDEYRKLKKIPGQELQAKAHCRVGVAALNTLAGYIDWVALA
HLTNDNCRLLEILCLLLSETELQLEAAECLLIAISRKGKLEDRKPLMVLFDDVAMHYILS
AAQSADGAATCNKSSPTQPVAGLVERHYTFLKRLCQVLCSLGSQLCFLVGSDVEVEVPAN
LSKYTEAFLAFTTHPSQFLRSSTQIMWGTLFRHEILSKDPVIIQMIIKYFRATMTNLVKT
GFPSRNDSPSCEYSRHDFDSDEDFNSFFNSFRAQQGEAVRNACRIVPLEGFQIAAEWLQY
QISTPIDIGTTVSKMAEGLCSILSPSAVQWDAMTFFTESVVGQMFKNVEVEKLPVDQGIE
LLQAVLNYNTQDPLILSCVLTNLSSLFPFVTHRPHFLPQVLYKLFASITFEVVEESKAPR
TRAVKNVRRHACSSIIKMSRDYPWFILPCFDILYNQVKKLFSNEALLTQMEKCALIEALV
LISNQFKDYTKQKAFLEELMATVSARWTSDEMRHVLWDPALFLAFVGADQLVAEGTDHTT
GINRSRLSFCVYTILGVVKRARWPADLEEAKAGGFVVGYTPTGAPIYRNPCTSQVLAMLP
NLLALIRTHNNLFLPENMCRLSETFSRAYEVIEVERNVVLGLPQPVLDIYDSPVYKTHLE
RMQGFFCTLYDNCYHILGNAGLSLQQDFYTIEGLAEQIVGSALISLDNVPDHRLRPMLRV
FLKQLVLSCPPEYYDSLLCPLLGPLFAYMLQRLNIRWQIINQRSTVSMEEDEDEVCEEKH
VTQEMLEEQLVRLVTREVLDLLTHACILKKVPEPAGNKEDVDDEEMMSTESQAVTANPAQ
PTGEMTELGKCLLKHEDIYMTLLTISFTSLSWKDTSNCHRTASMVCWTLLRQVVGGNLLP
EAVTWFYASVLKGLQMHGQHEVCNSALTQLALVIYENLRPRYLELRSVMTQIPSINLEAL
DQYDQRLLEPSSAQKVGEKKRKDQFKKLISGTVGKALGQQFKKEVHIRNLPSLFKKPKPE
KRDIVEPSESGALAALFSPTRDNI
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaccagtgtctgaaatgtgtgatcatctcatcaaagctgttaacgtgatgatg
gacgcggaatctagccaaatatatcgtctggaggccctaaagttttgtgaagaattcaaa
gagaagtgtcccttctgtgttccatgtgggctacagttagcagataaagcccaaacagca
gtggtgaggcactttggtctacagatactggagcatgtcatcaagttcagatggaacaac
atgccacagcaggagaaagtccagctgaagaactgtgccatggggctgttgtcaactggc
acctatcctatcctggaggaggagagccacatcaaggacgttctcgcacggatcatagtg
gagatgatcaagagagaatggcctcagcactggcctgacatgctcaaggagatggaggca
ctcaccagcataggggaggcccagacagagctggtgatgttgatcctgctgcggctggca
gaggacgtgatcaccttccagaccctgcccacccaacgccgtagggacatccagcagacc
ctcacccagaacatggagagcatctttagcttcctgctcaccatcctgcagctccacgtc
gacgagtaccgcaaactgaaaaaaataccaggccaagaattgcaggccaaggcccactgt
cgtgtaggcgtggctgcgctgaacaccctggcaggctacatagactgggtggccctggcc
cacctcaccaacgacaactgtcgcctgctggagatattgtgtctgctgctcagtgagacc
gagctgcagctggaggctgctgagtgcctgctcatcgccatcagccgcaaggggaagctg
gaggacaggaaaccactgatggtgctgtttgatgatgtcgccatgcactacatcctgtct
gcagcacagtctgcagatggagcagcaacatgcaacaaatcgtctccaacacagccagtg
gcggggttggtggagagacactacacattcctgaagaggctatgtcaggtcctgtgttcc
ctgggcagccaactatgcttcttagtgggttcagatgtggaggtagaggtacctgcaaat
ctcagcaagtatacagaagcattcctggccttcaccactcacccaagccagttcctaagg
tcttccacccagatcatgtggggaaccctgttcagacatgagattctctccaaggatcct
gtcatcatccagatgataatcaagtactttagagccaccatgaccaacctagtcaagact
ggttttccttccaggaacgacagtcccagctgtgagtactcccgtcatgacttcgacagt
gacgaagacttcaactccttcttcaactcgttccgagcgcagcagggggaggcggtccgg
aacgcgtgtcgtatcgttcccttggagggcttccagattgcagcagagtggctgcagtat
cagatcagtacacccattgacatcgggaccactgtgtctaagatggctgaggggctgtgc
tctatcctgtctccgtcagcggtccagtgggatgctatgaccttcttcacagagagtgtt
gtgggacagatgttcaagaacgtagaggttgagaagttgccagtagaccagggcattgag
ctgctgcaggctgtgttaaactacaacacccaagaccctctcatcctgtcctgtgtcctc
accaacctctcctccctcttccccttcgtcacacaccgacctcacttcctgcctcaggtc
ctctacaagctgtttgcctccatcacatttgaggtggtagaggagagcaaggcgccacgg
acgcgtgcagtgaagaatgtcagaagacacgcatgctcctccatcatcaaaatgtctcga
gactacccatggttcattctgccatgttttgacatactgtataatcaggtgaagaagctg
ttctccaacgaggccctgttgacccagatggagaagtgtgctctgatagaggccttggtt
ctcatcagtaaccagttcaaagactacaccaagcagaaggccttcctggaggagctcatg
gccaccgtgtccgctcgctggacctccgacgagatgaggcatgtgctgtgggatcctgct
ctgttcctggccttcgttggtgctgatcagctggtggctgaaggcacagaccacacaaca
ggcatcaacaggtcacggttgagtttctgtgtgtacaccatcctgggggtggtgaagagg
gcccgctggccggctgacctggaggaggctaaggcggggggcttcgtggtgggctacacc
cctactggagccccaatctacagaaatccctgcacctcccaggtcctggccatgctgccc
aacctgctcgccctcatcagaacacacaacaatctgttcctgccggagaacatgtgtcgt
ctgagtgagacgttctccagggcctacgaggtgatcgaggtggagaggaacgtggttcta
ggcctgccacagccagtcctggacatctatgactctcccgtttataagactcatctagag
cgcatgcagggtttcttctgtaccctctatgacaactgttaccatatcctggggaatgca
ggcctatcattgcagcaggacttctacaccatcgagggattggctgaacagatcgttggt
tccgccttaatctccctcgacaacgtgcctgaccacagactccgccccatgctccgggtg
ttcctgaagcagttggtgctgtcgtgtcctccggagtactacgacagtctgctctgcccc
ctgctgggccctctgttcgcctacatgcttcagagactcaacatcaggtggcagatcatc
aaccagaggagtactgtcagtatggaggaggacgaggacgaggtgtgtgaggagaaacac
gtgacccaggagatgctggaggaacagctggttcgtctggtcaccagagaggttctggac
ctgctcactcatgcctgcatactgaaaaaagtgcctgagccagcagggaataaggaggat
gtggatgatgaggagatgatgtccactgagtcccaggcagtcacagccaatccagcccag
ccaacaggcgaaatgactgagctggggaagtgtctcctcaaacacgaggacatctatatg
accttgttgactatctcgttcacctctctgtcctggaaggacaccagtaactgtcaccgc
accgcctccatggtctgctggaccctgctacgacaggttgtaggggggaaccttttgcca
gaggcggtcacatggttctatgccagtgttctgaagggtctgcagatgcacgggcagcac
gaggtctgtaactcggccctcacacaactggccctggttatatacgagaacctgcggccg
cggtacctggagctaaggagtgtgatgactcagatccccagcattaatctggaggctctg
gaccagtacgaccagcggctgctggagcccagctccgcccagaaggtgggagagaagaag
aggaaggaccagttcaagaagctcatctccggcaccgtggggaaagctcttggccagcag
tttaaaaaggaggtacatatccgaaatcttccgtctctctttaagaagcccaagccagag
aaaagagacattgtggagcccagtgagagtggagcactagcagctctcttctccccaaca
cgggacaacatctag
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