Coregonus clupeaformis (lake whitefish): 121547107
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Entry
121547107 CDS
T08357
Name
(RefSeq) 3-hydroxy-3-methylglutaryl-CoA lyase, cytoplasmic isoform X1
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00280
Valine, leucine and isoleucine degradation
cclu00650
Butanoate metabolism
cclu01100
Metabolic pathways
cclu04146
Peroxisome
Module
cclu_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
121547107
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
121547107
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121547107
Enzymes [BR:
cclu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
121547107
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Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
121547107
NCBI-ProteinID:
XP_041714150
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Position
31:36998594..37052503
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AA seq
336 aa
AA seq
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MGNIPTTVKHCLSYEQLIQDYPWLGSRLQEEKRTLTREYPEYVKIIEVGPRDGLQNEKEM
VPTGVKIQLINMLSETGLPVIEATSFVSSKWVPQMADHTEVLQAIHRSSHARYPVLTPNM
HGFRDAVAAGATEVAVFGSASETFSRKNINCSIDASMLRLEEVICAAKQQQIPVRGYVSC
ALGCPYEGPIEPTKVTEVVKRLYELGCYEVSLGDTTGVGTPGSMAKMLHCVMKEVPSSAL
AVHCHDTYGQALANILTALQMGICAVDSSVAGLGGCPYAQGASGNVSTEDVLYMLHGMGI
KTGVDLSKVIEAGDLICKALNRKTNSKVAQARSKSS
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacatccccaccacggtgaagcactgcctgagctatgaacaactcatccaggat
tatccgtggctaggaagccggctgcaggaggagaagcgcactttaacacgtgaatatcca
gagtatgtcaaaattattgaagtcggtccaagagacggacttcaaaatgaaaaggaaatg
gttccgacaggagtcaaaatccagctgataaacatgctctcagaaacaggcctgcctgtg
atcgaggccaccagctttgtgtcttcaaagtgggtaccacagatggcggaccacactgaa
gtgcttcaagccatccacagatcttctcatgctcgttatcctgttctgacacccaacatg
cacggctttcgggatgctgttgcagctggtgctactgaagtggccgtgtttgggtctgcc
tctgagaccttcagtcggaaaaatataaattgctctatcgatgccagcatgctgaggttg
gaggaagtcatttgcgctgctaaacaacaacagattccagtccgtggatatgtttcttgt
gcactaggatgtccatacgagggacccattgaacccactaaagttacagaggtggtcaag
cggttgtatgaactgggctgctatgaggtgtctctgggggatactaccggtgtaggcacc
ccaggttccatggccaagatgctgcactgcgtcatgaaggaggtacccagcagcgctctg
gccgttcactgccacgacacctacggccaggctctggccaacatcctaactgcactgcag
atggggatttgtgcggtggactcgtctgtagcaggtctgggagggtgcccatatgcccag
ggtgcctctggtaacgtgtcaacagaagatgttctctatatgctccatggcatgggcatt
aaaactggagtggatctctccaaggtaatagaggcaggtgatttaatctgcaaagcctta
aaccgcaagaccaactccaaggtagcccaagcaagaagcaagtcctcatga
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