KEGG   Coregonus clupeaformis (lake whitefish): 121547179
Entry
121547179         CDS       T08357                                 
Name
(RefSeq) ras-related protein Rab-5C-like
  KO
K07889  Ras-related protein Rab-5C
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04137  Mitophagy - animal
cclu04144  Endocytosis
cclu04145  Phagosome
cclu04148  Efferocytosis
cclu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    121547179
   04145 Phagosome
    121547179
   04137 Mitophagy - animal
    121547179
   04148 Efferocytosis
    121547179
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    121547179
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cclu04131]
    121547179
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cclu04147]
    121547179
   04031 GTP-binding proteins [BR:cclu04031]
    121547179
Membrane trafficking [BR:cclu04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    121547179
 Endosome - Lysosome transport
    121547179
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121547179
  Exosomal proteins of other body fluids (saliva and urine)
   121547179
  Exosomal proteins of colorectal cancer cells
   121547179
  Exosomal proteins of bladder cancer cells
   121547179
GTP-binding proteins [BR:cclu04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    121547179
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RsgA_GTPase Gtr1_RagA AAA_16 B12-binding DUF2624
Other DBs
NCBI-GeneID: 121547179
NCBI-ProteinID: XP_041714248
LinkDB
Position
31:2562461..2589601
AA seq 220 aa
MAGRGAPARPNSPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFQEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADIANKRAVELQEVQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEAQGGGGAGGRTRTGVDLQEPAPQGRSGQCCGGSN
NT seq 663 nt   +upstreamnt  +downstreamnt
atggcaggtcgtggagcaccggcacgacccaacagcccggcggcaggcaacaagatctgc
cagttcaagctggtgctgctgggagaatcggcggtgggcaagtccagcctggtgctgcgg
tttgtcaagggacagtttcaggagtaccaagagagcaccatcggagctgccttcctcaca
cagactgtctgcctggatgacacaacggtcaagtttgagatttgggacacagcaggccag
gagcgataccacagtctggcgcccatgtactacaggggagcccaagcggccattgtggtc
tacgacatcaccaacacagacacttttacgcgagcaaagaactgggtgaaggagctgcag
agacaagccagccccaacatcgtcatcgctctggccgggaacaaggccgacatcgccaac
aaaagagccgtcgaactccaggaagtacaggcctatgctgatgataacagtctactgttc
atggagacttcagccaagactgctatgaatgtcaatgaaatcttcatggccatagccaag
aagctgcccaagaacgaggcgcaaggtggaggcggggcagggggccggaccaggactgga
gtggaccttcaggagcccgccccccagggccgcagcggccaatgctgtggcgggagcaat
tag

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