Coregonus clupeaformis (lake whitefish): 121547179
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Entry
121547179 CDS
T08357
Name
(RefSeq) ras-related protein Rab-5C-like
KO
K07889
Ras-related protein Rab-5C
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04137
Mitophagy - animal
cclu04144
Endocytosis
cclu04145
Phagosome
cclu04148
Efferocytosis
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121547179
04145 Phagosome
121547179
04137 Mitophagy - animal
121547179
04148 Efferocytosis
121547179
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121547179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121547179
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121547179
04031 GTP-binding proteins [BR:
cclu04031
]
121547179
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
121547179
Endosome - Lysosome transport
121547179
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121547179
Exosomal proteins of other body fluids (saliva and urine)
121547179
Exosomal proteins of colorectal cancer cells
121547179
Exosomal proteins of bladder cancer cells
121547179
GTP-binding proteins [BR:
cclu04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
121547179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
RsgA_GTPase
Gtr1_RagA
AAA_16
B12-binding
DUF2624
Motif
Other DBs
NCBI-GeneID:
121547179
NCBI-ProteinID:
XP_041714248
LinkDB
All DBs
Position
31:2562461..2589601
Genome browser
AA seq
220 aa
AA seq
DB search
MAGRGAPARPNSPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFQEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADIANKRAVELQEVQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEAQGGGGAGGRTRTGVDLQEPAPQGRSGQCCGGSN
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtcgtggagcaccggcacgacccaacagcccggcggcaggcaacaagatctgc
cagttcaagctggtgctgctgggagaatcggcggtgggcaagtccagcctggtgctgcgg
tttgtcaagggacagtttcaggagtaccaagagagcaccatcggagctgccttcctcaca
cagactgtctgcctggatgacacaacggtcaagtttgagatttgggacacagcaggccag
gagcgataccacagtctggcgcccatgtactacaggggagcccaagcggccattgtggtc
tacgacatcaccaacacagacacttttacgcgagcaaagaactgggtgaaggagctgcag
agacaagccagccccaacatcgtcatcgctctggccgggaacaaggccgacatcgccaac
aaaagagccgtcgaactccaggaagtacaggcctatgctgatgataacagtctactgttc
atggagacttcagccaagactgctatgaatgtcaatgaaatcttcatggccatagccaag
aagctgcccaagaacgaggcgcaaggtggaggcggggcagggggccggaccaggactgga
gtggaccttcaggagcccgccccccagggccgcagcggccaatgctgtggcgggagcaat
tag
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integrated database retrieval system