Coregonus clupeaformis (lake whitefish): 121547197
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Entry
121547197 CDS
T08357
Name
(RefSeq) netrin-3-like
KO
K06843
netrin 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121547197
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Axon guidance molecules
121547197
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
NTR
EGF_LMN_ATRN
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
121547197
NCBI-ProteinID:
XP_041714274
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All DBs
Position
31:1073024..1171310
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AA seq
645 aa
AA seq
DB search
MREAWRCLLGLCLLACSASAASQHGAANPFAGQQMPPDPCYDDAGAARRCIPEFINAAFG
KEVAVSSVCGRPTPSRYCSVVERGEERPSVRTCQICDAADPWRAHPPSYLTDLNSANNLT
CWQSENLHTSPHNVTLTLSLGKTFEITYVSLQFCSPRPESLAVYKSMDYGKSWTPYQYYS
SQCRRMYNRPNKAAITKQNEQEALCTDGHTDLYPLSGGLIAFSTLDGRPSGKDFDNSPVL
QDWVSVTDIRVVFSRPQLPRDLGAGGGGGIGGGGRPDEDPMVPSTSLPAYFYAVGDFQVG
GRCKCNGHASRCLKDKEGKLVCDCKHNTEGPECDRCKPFHYDRPWQRASAREANECLPCN
CNLHARRCRFNMELYKLSGRKSGGVCMNCRHNTAGRHCHYCKEGFYRDMARPIIHRRACK
ACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQSRSPVAPCIKIPVVNPTAM
VSSSTEEPAADCESYCKPVKGNLKINMKKYCKKDYAMQVNVLDMETVGDWAKFSVNVVSV
YKSRGEPLKRGDNILWIHMKDLACKCPKIQMSKRFLVMGTSETRPGGSGAGGPGAGPGAG
GATAGAERMGLLADKNSLVIQWRDIWTRRLRKFQRKEKNGKCSKA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgagggaagcctggaggtgcctgctggggctgtgcctcctggcatgctccgcctccgcc
gcctcccaacacggtgccgccaacccctttgctgggcaacagatgcccccagacccctgc
tacgacgacgcgggcgccgcacgccgctgtatccccgagttcatcaatgccgcctttggc
aaggaggtggcagtgtctagcgtgtgtggccggccgacaccgtcgcgctattgtagtgtg
gtggagcgcggtgaggagcggccctcagtgcgcacctgccagatctgcgatgcagcggac
ccgtggcgtgcccacccgccctcctacctcaccgacctcaactcggccaacaacctcacc
tgctggcagtcggagaacctgcacacctcgccacacaacgtcaccctcaccctgtcactg
ggaaagacgtttgaaatcacctacgtcagcctgcagttctgctcgccccgccccgagtca
ctggccgtctacaagagcatggactacggcaagagctggacgccttaccagtactattcg
tcccagtgccggcgcatgtacaaccggcccaacaaggcggccatcaccaagcagaacgag
caggaggccctttgcaccgacggccacactgacctctaccccctctccggagggctcatt
gccttcagcactctggatgggcggccctccgggaaggactttgacaacagccctgtgctc
caagactgggtatcagtcactgacatccgcgtggtcttcagccggccccagctgccccgc
gatttaggggcaggaggagggggggggataggcgggggaggccggccggacgaggaccca
atggtaccgtccacatctctgccggcgtacttctacgcggtgggggacttccaggtgggc
gggaggtgtaagtgcaacgggcacgcctcacgctgcctcaaggacaaggagggcaagctg
gtgtgcgactgcaagcacaacacagaggggcccgagtgcgaccgctgcaagcccttccac
tacgaccggccgtggcagagggccagcgcccgtgaggccaacgagtgtttaccgtgtaac
tgcaacctgcacgcccgccgctgccgcttcaacatggagctgtacaagctgtcggggaga
aagagcggaggcgtgtgcatgaactgtcgccacaacacagctggacgccactgccactac
tgcaaggaaggcttctaccgggatatggccaggcccatcatacaccgccgcgcatgcaaa
gcctgtgactgccacccggtgggtgcggcagggaagacatgtaaccagacgacgggccag
tgcccctgtaaggacggcgtgacgggcatcacctgcaaccgctgtgccaagggctaccag
cagagccgctcgcccgtggccccctgcatcaagatcccagtggtgaaccctacagcgatg
gtcagcagcagcacagaggaaccggcagcagattgtgagtcctattgcaaaccagtgaaa
gggaatctgaagatcaacatgaagaaatactgcaagaaagactatgcgatgcaagtcaat
gtgctggacatggagacggtgggtgactgggccaagttctctgtcaacgtggtgtctgtc
tacaagagccgcggcgagccgctcaaacggggcgacaacatcctgtggatccacatgaag
gacctggcctgcaagtgtcccaaaatccagatgagcaagcgcttcctggttatgggcacc
agcgagaccaggcccgggggttctggggctggggggcccggggctggaccaggggccgga
ggggccactgcgggagcagagcgaatggggctcctggccgataagaacagcctggtcatc
cagtggagagacatttggacacggcgcctccggaagttccagcgcaaagagaagaacggc
aagtgcagcaaagcatga
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