Coregonus clupeaformis (lake whitefish): 121547208
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Entry
121547208 CDS
T08357
Name
(RefSeq) uncharacterized protein LOC121547208 isoform X2
KO
K12485
Rab11 family-interacting protein 3/4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121547208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121547208
Membrane trafficking [BR:
cclu04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
121547208
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Gene cluster
GFIT
Motif
Pfam:
RBD-FIP
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
2-thiour_desulf
TraH
Motif
Other DBs
NCBI-GeneID:
121547208
NCBI-ProteinID:
XP_041714292
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All DBs
Position
31:21439917..21525597
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AA seq
1121 aa
AA seq
DB search
MEQTLMSSPLGHSEWDPERIPSHGFLLMDSDKGAILPQRESGQTGLDFQKVDQGVSLSLE
ELFQENALNLDSLFRTSSYSGGDQILPWKGYQSNHSQDVPLGKPAEVSPLKYKIEEHNNV
SDSPLPGLLFSKMANLFRDNSACEEQNPPVGDRDPVTCHRELITLSKPPSTVKVSDRTPD
TNAEASSLLVDHLSSEHSPFSPGPAPSGEVNPQGVSEKLLFPSMDEDRGLPPPLQGGESV
PPETGDKGLFLGPVTDLPTVSNITAEGLPESSLSQNAIPFDCPSLLPEVQVGSVPLLDLE
VPDCGLSLCPTHLDSPTCTGATSDSPAEDSEQEHTLATAILTLSDHIGEGDSSLFLNSSP
LIEPLSPKVLSDRDASILGHLPSGCSSEENGPQDLMEDKVIFDVTKHEGEEEMALDQCIT
SDALRDEETWHLKPPEAIQGDCIPALQTEQSDGERLADLDLFAGPTDCHKRDSFDYPVLE
LNGSSSESGWTSEQAVENLSLSKMVGSDSMPVVPIVNRREKDPSPLMAVFDALDQDGDGF
VRIEEFMEFAAAYGADQVKDLTKFLDPSGLGVISFEDFHRGITAISNGSTEPQLYDVHFS
PGDGAVGCPEEYDEQNEVTDSAYLGSESTYSECEMFTDEDTGALVQPEMHEDVETDSGID
ATLHDPEDSSNRFSLSSELHSHSMVTVIGREEEEHFEDFGESNTSELLLDTTEEGTEGEG
DSSHLQTLDQNNCSSLLLSPSAPTTLPASFQSFLREEALDFFCNQCHKQISRLEDLSTRL
NFLEINSSSKRLSSKKAARHLRNSSMTLGSMGELSRDILDLADTDITDKVLLLERRAAEL
EKDSEASGEQHTRLRQENLQLVHRANALEEQLKEQELRAEDHLHQETRRHKDALTKLERE
RDLELENLQARLQQLDEENSELRSCVPCYRANIERLEEEKRKLEDEVEDATERLNEELET
RRKTSDKLTHERHQNQKEKEHTQELIEDLRKQLEHLQLYKLEAEARRGRSPSAGLQEYQS
RTREAELEQEIRRLKQDNRSLKEQNDELNGQIINLSIQGAKNLVTASFSESLAAEINSVS
RGELMEAIRKQEDVNFRLQDYIDRIIVAIMESNPSMLEVKY
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atggaacagactctgatgtctagccctctggggcattcagagtgggatccagaacgcata
ccctcccatggattcctcctcatggattcagacaaaggagccatactgcctcagagagaa
agtggtcagacaggtttggatttccagaaagtcgaccagggtgtatctctaagcctggaa
gagctttttcaggagaacgccttaaatttagacagccttttcaggacctccagttactct
ggtggagatcagatcttgccatggaagggatatcaatctaatcattcccaagatgttccc
ctgggtaaacctgcagaggtatcgcctctcaaatacaaaattgaggaacataacaatgtc
agtgacagtcctctacctgggctgttattctccaaaatggctaatttgttcagggacaac
tcagcctgcgaggaacaaaatccacctgtgggtgacagagaccctgttacctgtcacagg
gagctgataacactcagtaaacctccttctactgtgaaggtttcagataggactccggat
accaacgctgaggcttcctctttattggtagatcacctctcatctgaacactcccctttt
tcccccggccctgctccttcaggtgaggtaaacccacagggtgtcagtgagaagctttta
ttcccgtcaatggatgaggacagaggcctccctcctcccttgcagggtggggagtctgtg
ccacctgaaaccggggacaaaggtttattcctgggacctgtgactgatctgcccacggtc
agtaacattaccgcagaaggtttacctgagagcagcctctcacaaaacgccatccctttt
gattgccctagcctattgccagaggttcaggtgggatctgtgcctttgctggatctggag
gttcccgactgtggcctcagcctctgccctactcatctcgactcacctacctgcacaggt
gctacatcagattcacctgcagaggattcagagcaggaacacacgctagctactgcaatc
ctgactctctcggaccacataggtgagggggactcgtccctctttctgaactcctcacca
ttgattgaacccctgtcaccaaaagtcctctccgacagagatgcttcgatcctgggtcac
ctgcccagtggctgcagctcggaggagaatggcccccaggatttgatggaagacaaagtg
atctttgatgttaccaaacatgagggagaggaggaaatggctctggatcagtgcattacc
tcagatgcgctgcgcgatgaggaaacttggcacttgaaaccacccgaggctatacagggt
gactgtattcctgctttacaaactgaacagagtgatggggaaaggttggcagacttggac
ctgtttgccggacccacggattgtcacaaacgggatagttttgattaccctgttctggag
ttgaatggttcgtcttctgagtctggatggactagtgaacaagcagtggagaatctgtca
ctctctaagatggtggggtctgactccatgcccgtggttcccatagtgaatcggagagag
aaagacccgtcacctctgatggccgtgtttgacgctctggaccaggatggggatggattt
gtacgcattgaggagtttatggagtttgctgctgcctatggggctgaccaggtgaaggat
ctgaccaagttcctggatcctagtgggctgggggtgatcagcttcgaggacttccatcga
ggaatcacggccatcagcaatggaagtacagagccccagctctacgatgtgcacttcagc
ccaggggacggagcagtgggctgcccagaggagtacgatgagcagaacgaggtgacggat
agtgcctacctgggctcggagagcacctacagcgagtgtgagatgttcaccgacgaagac
acgggagccctagtccagccagagatgcacgaggatgtggagacggacagcggcatcgac
gcaacgctgcacgaccccgaggacagcagcaacaggttctccttaagctcagagctgcac
agccactccatggtgacagtgatcggcagggaggaggaggagcactttgaggactttggg
gagagcaacacctcggagctgctgctggacaccactgaggaggggacagagggagagggg
gactcgtcccacctccagactctggaccagaacaactgctcctccctgctactctctccc
agcgcccccactactctccccgccagctttcagagcttcctcagggaggaggcactggac
tttttctgtaaccaatgtcacaaacaaatctctcgcctggaggacctctccactcgcctc
aatttcctagagataaatagctccagcaagaggctgtccagcaagaaagcagcacgacac
ctccggaacagctccatgacgctgggcagcatgggcgagctgtcccgggacatactggac
ctggccgacaccgacatcactgacaaggtgctcctgctggagcgtcgcgcggcagagctg
gagaaggactccgaggccagcggggagcagcacacacggctccgccaggagaacctgcag
ctggtgcaccgggccaacgccctggaggagcagctcaaggagcaggagctccgcgccgag
gaccacctgcaccaggagacccgccgccacaaggacgccctcaccaagctggagcgggag
agggacctggagctggagaacttgcaagctaggctgcagcagctggatgaggagaacagt
gagctgaggtcctgtgtgccctgttaccgtgccaacattgagagactagaggaggagaag
aggaagctagaggatgaggtggaggatgcgactgagaggctgaacgaggagctggaaacc
cgcaggaagacttccgacaagctgacccacgagcgccaccagaaccagaaggagaaggaa
cacacgcaggagctgattgaggacctgcggaagcagctggagcacctgcagctatacaag
ctggaggcggaagccaggagggggcgctctcccagcgccgggctgcaggagtaccagagc
cgcacccgcgaggccgagctggagcaggagatccgacgccttaagcaagacaaccgcagt
ctgaaggagcagaacgacgagctgaacggccagatcatcaacctgagcatccagggagcc
aagaatctggtgacggcctccttctccgagtcgctggcggccgagatcaactctgtgtcc
cggggagagttgatggaggccatccgcaagcaggaggacgtcaacttccgactacaggac
tacatcgaccgcatcatcgtggccatcatggagtccaacccctccatgctggaggtcaag
tactag
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