Coregonus clupeaformis (lake whitefish): 121547214
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Entry
121547214 CDS
T08357
Name
(RefSeq) rhomboid-related protein 1-like isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121547214
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
121547214
Peptidases and inhibitors [BR:
cclu01002
]
Serine peptidases
Family S54: Rhomboid family
121547214
BRITE hierarchy
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_1
DUF5580
DUF5580_M
EF-hand_11
Motif
Other DBs
NCBI-GeneID:
121547214
NCBI-ProteinID:
XP_041714302
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All DBs
Position
31:complement(20883223..20946274)
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AA seq
372 aa
AA seq
DB search
MDRSSLFQLIQEQLDPDNTGFIAVENFTSLVEHHELQLDPSKLDMLFALVQSNEDGQVCY
QELIELMSSKRSSSFRRAIANGRRTLQREILLDETGLGVYKRFVRYVAYEILPCETDRRW
YFHQNRLCPPPVFMAIITIVQIIVFMCYGIMLNKWVLQTYQPDFMKSPLVYHPRHRHQVW
RFFSYMFMHVGLEQLGFNALLQLMIGVPLEMVHGILRISLLYMAGVVAGSLTVSITDMRA
PVVGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMILALVCMSSEVGRAVWLRFSPPLP
SSGPQPSFMAHLSGAVVGISMGLLILRSYEESLQKQCSWWVIVFSFITFLLFAIFWNIFA
YELLGVQLPPAP
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggatagaagctccctgtttcagctcatacaagagcagctggacccagacaacaccggt
ttcatcgcagtggagaacttcaccagtttggtggagcaccatgagctgcagctggacccc
tccaaactggacatgctgttcgccctggtgcagagcaacgaggatggacaggtgtgctac
caggagctcatcgagctgatgagcagcaagcgttccagcagtttccgacgggccatcgcc
aatggccggcgtacgctgcagcgagagatcctattggatgagacgggcctgggcgtgtac
aagcgctttgtgcgctacgtggcctatgagatcctgccctgcgagacagaccggcgctgg
tacttccaccagaaccgcctttgtcccccgcccgtcttcatggccatcattaccatcgtc
cagatcatcgtgttcatgtgctatggcatcatgctgaataagtgggtgctgcagacatac
cagccagacttcatgaagagccccctggtgtaccaccccagacaccgccaccaggtctgg
cgcttctttagctacatgttcatgcacgttgggttggagcagctggggttcaacgctctg
ctccagctgatgatcggtgttcccttggagatggtccacggcatcctacgcatcagtctg
ctgtacatggccggtgttgtggcaggttccctgacggtgtccatcacagacatgcgcgct
ccagtggtggggggctccgggggggtctatgctctgtgctcggcgcacctggccaacgtc
gtcatgaactgggctggcatgcggtgtccatacaagctcctccgcatgattctggcgctg
gtgtgcatgagttcggaggtgggccgtgccgtgtggctgcgcttctccccacccttgccc
tcttcagggccccagcccagcttcatggcccacctatcgggggcggtggtaggcatcagc
atgggcctgctcatcctgcgcagctatgaggagagcctgcagaagcagtgctcctggtgg
gtcatcgtcttctccttcatcacgttccttctttttgccatcttctggaacatcttcgcc
tacgagctgctgggggtgcagctccctcccgctccctga
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