Coregonus clupeaformis (lake whitefish): 121547234
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Entry
121547234 CDS
T08357
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 24-like isoform X1
KO
K15167
mediator of RNA polymerase II transcription subunit 24
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121547234
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
121547234
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Gene cluster
GFIT
Motif
Pfam:
Med24_N
Motif
Other DBs
NCBI-GeneID:
121547234
NCBI-ProteinID:
XP_041714333
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Position
31:complement(20073076..20112574)
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AA seq
986 aa
AA seq
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MKVVNLKQAILQAWKERWSDYQWAINIKKNFPKGATWDYLNLAEALMEQAMIGPSPNPLI
LSYLKYAISSQMVSYSSVLLAISKFDDFSRELCVKSLLEIMDMFCHRLSCHGKAEECIGL
CRALLGVVVWLLTGCACYCERLRDLGPSASTEANLRACLERLRDLVNSTKNRALVHIARL
EDQASWTNVEQALLTVTEGLSSLTNQTLRGKLEECISLVKSIPTMLSEQSDPPHHSLFPS
VHAFIMLEGTMNLTGETQPLVEQLMMIKRMQRIPVPLFVLEIWKACFTGLIESPEGTEEL
KWTAFTFLKIPQVLLRLKKYPQGEKVQQDFMDDVNIAFEYLLKLTPLLDKADQRCNCDCL
SMLLQECNKLGLLSDSNTTNLTSKREYAPRLKTAENANIQPNPGLILRAEPTVTNILKTV
DADHSKSPEGLLGVLGHMLSGKSLDLLLAAAAATGKLKSFARKFIKLNEFPKHISGEGSK
SASVRALLFDISFLMLCHVVQTYGSEVILSDPSPSGETPFFETWLQTCMPEEGKTLNPDH
PCFRPESGKVESLVALLNNSSEMKLVQMKWHEICLSTPAAILEVLNAWENGVLSVEAVQK
ITDNIKGKVCSMAICAVAWLVAHVRMLGLDEREKPQTMIRQLMTPLYGENTLQFYNERVV
IMSSILENMCADVFQQTGLALRPPMEGQEPIPYRNLLSAKEPIHEALRKQFRSVLWKGWV
DSGALHLFESLLHTGGVFWFTNNLVKELLKETRQEWANRVVELLYSIFCLDTQQITLTLL
GHILPNLLTDSAHWHSLADPPGKALAKLSVWCALSSFSTHHKGQASARQRKRQREDIEDY
SSLFPLDDTQPSKLMRLLSSNEDEPVVLSSPGDRSMSTSLSASQLHTVNMRDPLNRVLAN
LFLLISSILGSKTAGPHTQFVQSFMEECVECLEQGSRGSILQFMPFTMVSELVKLPALAK
PKVVLGITDLTLPLGRRVAAKAISAL
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtggtcaatttgaaacaagccatcctccaggcttggaaggagcgctggagtgac
tatcaatgggccatcaacatcaaaaagaacttcccaaagggagccacatgggactacctc
aacttggcagaggctctcatggagcaggcaatgattggcccttctcccaacccgctcatc
ttgtcctacctcaagtatgccatcagttcccagatggtctcttattcaagtgtactctta
gccatcagtaagtttgatgacttctccagagagctctgcgtcaagtccctgttggagatt
atggacatgttctgccaccgtctcagctgccacgggaaggcggaggagtgcatcgggctg
tgccgggccttgctgggcgtggtagtgtggctcctgacgggctgcgcctgctactgcgag
aggctcagggatctggggccgtcggccagcacagaagccaacctgagggcctgtctggag
aggctaagggatttggtgaacagcacgaagaacagggccctggtccacatcgctcgccta
gaggaccaagcctcctggaccaatgtggagcaagctttgctcacagtgacagaggggctc
agcagtctgaccaatcagacactgagaggcaagctggaggagtgtatttcattggtgaag
agtattcctacgatgctgtccgaacagtcagaccccccgcaccactcgttgttcccctcg
gtccacgccttcatcatgctggaaggaaccatgaacctgacaggggagacccagccactg
gtggagcagctgatgatgatcaagaggatgcagcgtatccctgtgccgctctttgtgttg
gagatctggaaggcgtgtttcactggcctcattgagtcaccagagggcactgaggagctc
aagtggaccgccttcaccttccttaagatcccccaggttctcctcagactaaagaagtat
ccccagggtgagaaggtacagcaggacttcatggatgacgtgaacattgcctttgagtac
ttgctgaagctcacaccactcctggacaaggctgaccagagatgcaactgcgactgtcta
agtatgctactgcaggagtgcaataagctgggtctcctgtcggactccaacacgaccaac
ctcacttctaaacgggagtacgctccacggctaaagactgcagaaaacgccaacatccag
cccaacccaggcctcatcctgcgagccgagcccactgtcaccaacatcctcaagacggtg
gacgcagaccactccaagtctccagagggcctgctgggggtgctgggacacatgctgtct
gggaagagcctggacctcctactggctgcagccgcagccacgggaaaactaaaatccttc
gcccggaagttcatcaagctgaatgagtttccgaagcacatcagtggagaaggatccaag
tctgcctcggtgcgagccctgctgttcgacatatccttcctcatgctgtgtcacgtggtg
cagacctacggatcagaggtgatcctgtcggatcccagcccctcaggggagaccccgttc
tttgagacgtggctgcagacctgcatgccagaagagggcaagaccctgaacccagaccac
ccctgcttcaggcccgagtctggcaaggtggagagcctggtggccctcctcaacaactcc
tctgagatgaagctagttcagatgaagtggcacgagatctgcctcagcacgccggcggcc
atcttggaggtgttgaacgcctgggagaacggcgtgctgtctgtggaggccgtgcagaag
ataacagacaacatcaagggcaaggtatgcagcatggctatctgtgctgtggcctggctg
gtagcccatgtgaggatgctggggctggatgagagggagaagccccagaccatgatccgt
cagctcatgaccccgctgtacggggagaacactctgcagttctacaatgaacgagtggtg
atcatgagttccatcctggagaacatgtgtgctgacgtgttccagcagacaggcctggca
ctgcggccgcccatggagggccaggagcccatcccctaccgcaacctgctctcggccaag
gagcccatccacgaagccctccgcaagcaattccgttcggtgctgtggaagggctgggtg
gacagtggcgcactacacctctttgagagcctgctgcacacaggaggggtgttctggttc
accaacaacctggtcaaggagctgctgaaggagactcgccaggagtgggccaaccgggtg
gtggagctgctctacagcatcttctgcctggacacccagcagatcactctcaccctgctg
ggccacatcctgcccaacctgctcacagactcggcccactggcacagcctggcagacccg
cccggcaaggccttggctaagctgtctgtatggtgtgctctcagctccttctccactcac
cacaaaggccaggcctcagctcgacaacgcaagaggcagcgggaggatattgaggactac
agtagcttgttccctctggacgacacgcagccctccaagctcatgcgtctgctcagctcc
aacgaggacgagccggtggtcctttctagtccaggtgaccggtccatgtccacctccctg
tcggcctcccagctccacacggtcaacatgagggaccctcttaaccgcgtcctagccaac
ctcttcctgctgatctcgtccatcctgggctcgaagacggcagggccacacacccagttt
gtgcagagcttcatggaggagtgtgtggagtgtctggagcagggcagccgcggaagcatt
ctgcagttcatgcctttcaccatggtctcagagctggtgaagcttcctgcgctggccaag
cccaaggtggtcttgggcatcactgacctgactctgcccctggggaggagggtggcagcc
aaggccatctcagccttataa
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