Coregonus clupeaformis (lake whitefish): 121547254
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Entry
121547254 CDS
T08357
Name
(RefSeq) inhibitor of nuclear factor kappa-B kinase subunit alpha
KO
K04467
inhibitor of nuclear factor kappa-B kinase subunit alpha [EC:
2.7.11.10
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04068
FoxO signaling pathway
cclu04150
mTOR signaling pathway
cclu04210
Apoptosis
cclu04620
Toll-like receptor signaling pathway
cclu04621
NOD-like receptor signaling pathway
cclu04622
RIG-I-like receptor signaling pathway
cclu04623
Cytosolic DNA-sensing pathway
cclu04625
C-type lectin receptor signaling pathway
cclu04920
Adipocytokine signaling pathway
cclu05132
Salmonella infection
cclu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121547254
04068 FoxO signaling pathway
121547254
04150 mTOR signaling pathway
121547254
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121547254
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
121547254
04621 NOD-like receptor signaling pathway
121547254
04622 RIG-I-like receptor signaling pathway
121547254
04623 Cytosolic DNA-sensing pathway
121547254
04625 C-type lectin receptor signaling pathway
121547254
09152 Endocrine system
04920 Adipocytokine signaling pathway
121547254
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121547254
09171 Infectious disease: bacterial
05132 Salmonella infection
121547254
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cclu01001
]
121547254
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.10 IkappaB kinase
121547254
Protein kinases [BR:
cclu01001
]
Serine/threonine kinases: Other
IKK family [OT]
121547254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IKBKB_SDD
Pkinase
PK_Tyr_Ser-Thr
IKKbetaNEMObind
Pkinase_fungal
Kdo
TBK1_ULD
DUF3887
Motif
Other DBs
NCBI-GeneID:
121547254
NCBI-ProteinID:
XP_041714357
LinkDB
All DBs
Position
31:24540643..24560464
Genome browser
AA seq
762 aa
AA seq
DB search
MDKPPFRQNQNCGNWELKERLGMGSFAHVYLYQHHDTSEKIAVKMCRLELTARNKDRWSR
EIQIMKKLNNLNVVTARDVPEEMKHIALNDLPLLAMEYCSKGDLRKMLSKPENCCGLKES
EVLSLLNDVGSGIQYLHENKIIHRDLKPENVVLQDVNGKLVHKIIDLGYAKDLDQGSLCT
SFVGTLQYLAPELFENKPYTVTVDYWSFGTMIFECSCGIRPFLHNLQPVQWASKVRNKGP
KDIMAVEELNGEVRFSTHLPYPNNLSRTLLEPMEMLLQLMLKWDPVQRGGKTNADSKKPL
CFEVLEQILCMKVVHILNMTTAQVHSFQLAPDESLHSLQRRIETETKIELVNQELLQETG
VSLDPRKPAAQCVLDGVRGWDSYIIYLFDKSLTKYSGPFSARQLPDKVNTIVREAKSQLP
LVVLKKVWGEAVSYICGLKDDYSRLFQGQRAAMLSLLRYNTNLTRCKNGMFAFSQQLKAK
LDFFKSSIQYDLEKYSDQMHYGISSEKMLKAWQENEEKAAAYAQVAEVSHLDEEIMSLHS
EIVELQRSPYARRQGDVMEQLEEKAIELYKQQKMKCRTPDPDVSSDSSEMVKAIIQTVQN
QDKVLRDLYTHLGKILLSKQKIIDLFPRIEKTLENIKDADNTVMQMQIKRQREFWHLLKI
ACAQNSTRNSIAASPESSNPLQVSQWAQSAQPISAPHPLTSLPGPNDSDAAPRLLQENQK
YLSQLTSLMQEAADEQSKSVVDQDWSWTKYETLSTKLQKRNV
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggataaacctcctttcagacaaaaccaaaactgcggaaactgggaattgaaagagaga
ttgggcatgggcagttttgcccatgtctacctgtatcaacatcatgacacatcagaaaaa
attgcggtgaaaatgtgtcgcctggagttgaccgcaagaaataaagacagatggagcaga
gagatccagatcatgaaaaagttgaataatctcaatgtagtgacagcgagagacgtgcca
gaggagatgaagcacattgccttaaacgaccttccactgctggccatggagtactgctcc
aagggagacctcagaaagatgctgagcaagcctgaaaattgctgtggactgaaagaaagt
gaagtactttccctgctcaatgatgttggttcaggcatccagtatttgcatgaaaacaag
atcatacacagagaccttaaaccagaaaacgtagtgctgcaggatgtcaatggaaagttg
gttcacaaaatcatagacttgggctatgccaaagacttggaccaggggagtctgtgcacc
tcatttgtgggaacactgcaatacctggcccctgagctatttgagaataagccttacact
gtcacagtggactactggagttttggcacaatgatatttgaatgcagttgtgggatccgg
ccttttctgcacaatcttcagcctgtccaatgggccagcaaagtgcggaacaaaggtccc
aaagacatcatggctgtggaggaattgaatggggaagtcagattctccacacatctacca
taccccaacaatctgagcaggacactgctggagcccatggagatgctgctgcagctaatg
ctgaaatgggaccctgtccagaggggaggcaagaccaacgctgacagcaagaaacccctg
tgctttgaagtgctggaacagatattatgcatgaaggttgtccacatcctgaacatgacc
acggcccaggtccactccttccagctggccccagatgagagcctccatagcctgcagcgc
cgcatcgagacggagaccaagattgagttggtcaaccaggagctgctgcaggagacgggg
gtgtcgctggaccccaggaagcctgcagcccagtgtgtcctcgacggggtgcgaggctgg
gacagttacatcatctatttgtttgacaagagcctcaccaagtactctggtcccttcagt
gctagacagctgcctgataaagtcaacactattgtgcgggaggctaagtcccagctgccc
ctggtggtgctgaagaaggtgtggggcgaggcggtgagctacatctgtggactgaaggac
gactacagcagactgttccagggccagagggctgccatgctgagcctcctgcgctacaac
accaacctgacccggtgcaagaacggcatgtttgccttctcccagcagctgaaggccaag
ctggacttcttcaagagcagcatccagtacgacttggagaagtacagcgaccagatgcac
tatgggatctcctcagagaagatgctgaaagcgtggcaggagaatgaggagaaggcggct
gcgtatgcacaggtggcagaggtgagccacctggacgaggaaatcatgtcgttacactcg
gagatcgtggagctgcaaaggagtccctacgctcgtcgccaaggagacgtcatggagcag
ctggaggagaaggcgattgaactctacaaacaacaaaaaatgaaatgcagaacgcctgac
cctgatgtgagcagtgacagctccgagatggttaaagccattatacagactgtccagaac
caggacaaggtcctgagagacctctacacacacctcggtaagatcttattgagcaagcag
aagatcattgacctgttcccgcgcatcgagaagacactggagaacatcaaggatgccgac
aacacagtgatgcagatgcagattaagagacagagagagttctggcacctattgaagatt
gcctgtgctcagaactcgacaaggaactcgatagcagccagcccagagtcgtccaacccc
ctgcaggtgtcccagtgggcccagtctgcccagcccatcagcgcccctcaccctctcacc
tccctacctggacccaatgacagtgatgctgccccacgactgcttcaagagaaccagaag
tacctcagtcagctgaccagcctaatgcaggaagctgctgacgagcagtccaaaagcgta
gtggaccaagattggagctggactaaatatgaaacgttgtctacgaaactgcaaaaacga
aatgtatga
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